RNA–Protein interactions for RNA: ENST00000261349.8

LRP6-201, Transcript of LDL receptor related protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP6, Length 10,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-201ENST00000261349 NAP1L2Q9ULW6 460 aaPredicted RBP6.06□□□□□ -1.44
LRP6-201ENST00000261349 CCDC146Q8IYE0 955 aa6.05□□□□□ -1.44
LRP6-201ENST00000261349 MCM4P33991 863 aa6.05□□□□□ -1.44
LRP6-201ENST00000261349 AAMPQ13685 434 aa6.05□□□□□ -1.44
LRP6-201ENST00000261349 FHOD3Q2V2M9 1422 aa6.05□□□□□ -1.44
LRP6-201ENST00000261349 MPHOSPH9Q99550 1183 aa6.05□□□□□ -1.44
LRP6-201ENST00000261349 CENPJQ9HC77 1338 aaPredicted RBP6.05□□□□□ -1.44
LRP6-201ENST00000261349 NCBP3Q53F19 620 aaKnown RBP6.05□□□□□ -1.44
LRP6-201ENST00000261349 AEBP1Q8IUX7 1158 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 CHMP4BQ9H444 224 aaKnown RBP6.04□□□□□ -1.44
LRP6-201ENST00000261349 GOLGA2Q08379 1002 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 ITPRIPQ8IWB1 547 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 C20orf194Q5TEA3 1177 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 DRC7Q8IY82 874 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 CLUAP1Q96AJ1 413 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 C22orf23Q9BZE7 217 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 COG6Q9Y2V7 657 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 BRD4O60885 1362 aaPredicted RBP6.04□□□□□ -1.44
LRP6-201ENST00000261349 PEG3Q9GZU2 1588 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 CBX1P83916 185 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 CASC1Q6TDU7 716 aa6.04□□□□□ -1.44
LRP6-201ENST00000261349 ISY1Q9ULR0 285 aaKnown RBP6.03□□□□□ -1.44
LRP6-201ENST00000261349 CGNL1Q0VF96 1302 aa6.03□□□□□ -1.44
LRP6-201ENST00000261349 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
LRP6-201ENST00000261349 FGD6Q6ZV73 1430 aa6.03□□□□□ -1.44
LRP6-201ENST00000261349 LRRC9Q6ZRR7 1453 aa6.03□□□□□ -1.44
LRP6-201ENST00000261349 PLCD3Q8N3E9 789 aa6.02□□□□□ -1.44
LRP6-201ENST00000261349 SYNJ1O43426 1573 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 C8orf34Q49A92 452 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 PANK1Q8TE04 598 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 PNISRQ8TF01 805 aaKnown RBP6.02□□□□□ -1.45
LRP6-201ENST00000261349 SYAP1Q96A49 352 aaPredicted RBP6.02□□□□□ -1.45
LRP6-201ENST00000261349 CAVIN1Q6NZI2 390 aaKnown RBP6.02□□□□□ -1.45
LRP6-201ENST00000261349 TAF3Q5VWG9 929 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 ERICH3Q5RHP9 1530 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 CCDC94Q9BW85 323 aaPredicted RBP6.02□□□□□ -1.45
LRP6-201ENST00000261349 SASS6Q6UVJ0 657 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 RNF214Q8ND24 703 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 VGLL3A8MV65 326 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 SMAP1Q8IYB5 467 aaPredicted RBP6.02□□□□□ -1.45
LRP6-201ENST00000261349 EIF3AQ14152 1382 aaKnown RBP6.02□□□□□ -1.45
LRP6-201ENST00000261349 MPNDQ8N594 471 aa6.02□□□□□ -1.45
LRP6-201ENST00000261349 E9PSI1 815 aa6.01□□□□□ -1.45
LRP6-201ENST00000261349 NOL8Q76FK4 1167 aaKnown RBP6.01□□□□□ -1.45
LRP6-201ENST00000261349 CHMP4AQ9BY43 222 aa6.01□□□□□ -1.45
LRP6-201ENST00000261349 MCTP1Q6DN14 999 aa6.01□□□□□ -1.45
LRP6-201ENST00000261349 TIAM1Q13009 1591 aa6.01□□□□□ -1.45
LRP6-201ENST00000261349 CCDC66A2RUB6 948 aa6.01□□□□□ -1.45
LRP6-201ENST00000261349 TBC1D2Q9BYX2 928 aa6.01□□□□□ -1.45
LRP6-201ENST00000261349 RGL3Q3MIN7 710 aa6.01□□□□□ -1.45
LRP6-201ENST00000261349 ERICH4A6NGS2 130 aa6□□□□□ -1.45
LRP6-201ENST00000261349 NCOA1Q15788 1441 aa6□□□□□ -1.45
LRP6-201ENST00000261349 PPP4R3BQ5MIZ7 849 aa6□□□□□ -1.45
LRP6-201ENST00000261349 GOLGA6L6A8MZA4 724 aa6□□□□□ -1.45
LRP6-201ENST00000261349 OFD1O75665 1012 aa6□□□□□ -1.45
LRP6-201ENST00000261349 HMGN5P82970 282 aaKnown RBP6□□□□□ -1.45
LRP6-201ENST00000261349 PKD2Q13563 968 aa6□□□□□ -1.45
LRP6-201ENST00000261349 APPP05067 770 aa6□□□□□ -1.45
LRP6-201ENST00000261349 A0A0G2JS52 829 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 BCL2L13Q9BXK5 485 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 DYNC1I1O14576 645 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.99□□□□□ -1.451e-6■■■□□ 18.2
LRP6-201ENST00000261349 HFM1A2PYH4 1435 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 CARMIL1Q5VZK9 1371 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 KIF16BQ96L93 1317 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 ST20-MTHFSA0A0A6YYL1 179 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 NCOA2Q15596 1464 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 PDCL2Q8N4E4 241 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 ZNF592Q92610 1267 aa5.99□□□□□ -1.45
LRP6-201ENST00000261349 PHF14O94880 888 aa5.98□□□□□ -1.45
LRP6-201ENST00000261349 TNPO1Q92973 898 aaKnown RBP5.98□□□□□ -1.45
LRP6-201ENST00000261349 MAP3K1Q13233 1512 aa5.98□□□□□ -1.45
LRP6-201ENST00000261349 TAF7LQ5H9L4 462 aa5.98□□□□□ -1.45
LRP6-201ENST00000261349 SPDYE4A6NLX3 237 aa5.98□□□□□ -1.45
LRP6-201ENST00000261349 PLPPR3Q6T4P5 718 aa5.98□□□□□ -1.45
LRP6-201ENST00000261349 TMF1P82094 1093 aa5.98□□□□□ -1.45
LRP6-201ENST00000261349 NBPF8Q3BBV2 869 aa5.98□□□□□ -1.45
LRP6-201ENST00000261349 RRP7AQ9Y3A4 280 aaKnown RBP5.98□□□□□ -1.45
LRP6-201ENST00000261349 KCNJ4P48050 445 aa5.97□□□□□ -1.45
LRP6-201ENST00000261349 FOXD4L6Q3SYB3 417 aaPredicted RBP5.97□□□□□ -1.45
LRP6-201ENST00000261349 FOXD4L3Q6VB84 417 aaPredicted RBP5.97□□□□□ -1.45
LRP6-201ENST00000261349 SMARCA4P51532 1647 aa5.97□□□□□ -1.45
LRP6-201ENST00000261349 MYOM3Q5VTT5 1437 aa5.97□□□□□ -1.45
LRP6-201ENST00000261349 PDZRN3Q9UPQ7 1066 aa5.97□□□□□ -1.45
LRP6-201ENST00000261349 EIF4G1Q04637 1599 aaKnown RBP5.97□□□□□ -1.45
LRP6-201ENST00000261349 KIF3AQ9Y496 699 aa5.97□□□□□ -1.45
LRP6-201ENST00000261349 APBB1O00213 710 aa5.97□□□□□ -1.45
LRP6-201ENST00000261349 TRERF1Q96PN7 1200 aa5.96□□□□□ -1.45
LRP6-201ENST00000261349 TSPY26PQ9H489 355 aa5.96□□□□□ -1.45
LRP6-201ENST00000261349 U2SURPO15042 1029 aaKnown RBP5.96□□□□□ -1.45
LRP6-201ENST00000261349 LETM1O95202 739 aaPredicted RBP5.96□□□□□ -1.45
LRP6-201ENST00000261349 CFAP53Q96M91 514 aa5.96□□□□□ -1.46
LRP6-201ENST00000261349 PANK3Q9H999 370 aa5.96□□□□□ -1.46
LRP6-201ENST00000261349 IFT57Q9NWB7 429 aa5.96□□□□□ -1.46
LRP6-201ENST00000261349 GTPBP4Q9BZE4 634 aaKnown RBP5.96□□□□□ -1.46
LRP6-201ENST00000261349 IRX3P78415 501 aaPredicted RBP5.96□□□□□ -1.46
LRP6-201ENST00000261349 ADAMTS8Q9UP79 889 aa5.96□□□□□ -1.46
LRP6-201ENST00000261349 PRPF40AO75400 957 aaKnown RBP5.95□□□□□ -1.46
LRP6-201ENST00000261349 BCAR3O75815 825 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 SYCE3A1L190 88 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms