RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
ALPK3-201ENST00000258888 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
ALPK3-201ENST00000258888 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.28
ALPK3-201ENST00000258888 PLIN1O60240 522 aa16.77■□□□□ 0.27
ALPK3-201ENST00000258888 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.27
ALPK3-201ENST00000258888 GORABQ5T7V8 394 aa16.76■□□□□ 0.27
ALPK3-201ENST00000258888 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
ALPK3-201ENST00000258888 NCBP3Q53F19 620 aaKnown RBP16.74■□□□□ 0.27
ALPK3-201ENST00000258888 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
ALPK3-201ENST00000258888 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
ALPK3-201ENST00000258888 PANK3Q9H999 370 aa16.74■□□□□ 0.27
ALPK3-201ENST00000258888 SLC4A3P48751 1232 aa16.73■□□□□ 0.27
ALPK3-201ENST00000258888 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
ALPK3-201ENST00000258888 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
ALPK3-201ENST00000258888 CCDC144AA2RUR9 1427 aa16.71■□□□□ 0.27
ALPK3-201ENST00000258888 ST18O60284 1047 aa16.71■□□□□ 0.27
ALPK3-201ENST00000258888 LMOD3Q0VAK6 560 aa16.71■□□□□ 0.27
ALPK3-201ENST00000258888 NOC3LQ8WTT2 800 aaKnown RBP16.71■□□□□ 0.27
ALPK3-201ENST00000258888 PDE4AP27815 886 aa16.71■□□□□ 0.26
ALPK3-201ENST00000258888 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.26
ALPK3-201ENST00000258888 USP47Q96K76 1375 aa16.71■□□□□ 0.26
ALPK3-201ENST00000258888 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
ALPK3-201ENST00000258888 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
ALPK3-201ENST00000258888 TAF7LQ5H9L4 462 aa16.7■□□□□ 0.26
ALPK3-201ENST00000258888 TPM4P67936 248 aa16.69■□□□□ 0.26
ALPK3-201ENST00000258888 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
ALPK3-201ENST00000258888 WASHC2CQ9Y4E1 1318 aa16.69■□□□□ 0.26
ALPK3-201ENST00000258888 NUTM2FA1L443 756 aa16.68■□□□□ 0.26
ALPK3-201ENST00000258888 KIF16BQ96L93 1317 aa16.68■□□□□ 0.26
ALPK3-201ENST00000258888 DDX11L8A8MPP1 907 aa16.68■□□□□ 0.26
ALPK3-201ENST00000258888 CRBNQ96SW2 442 aa16.68■□□□□ 0.26
ALPK3-201ENST00000258888 PRKRIP1Q9H875 184 aaPredicted RBP16.68■□□□□ 0.26
ALPK3-201ENST00000258888 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
ALPK3-201ENST00000258888 NGDNQ8NEJ9 315 aaKnown RBP16.68■□□□□ 0.26
ALPK3-201ENST00000258888 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
ALPK3-201ENST00000258888 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
ALPK3-201ENST00000258888 AMPHP49418 695 aa16.67■□□□□ 0.26
ALPK3-201ENST00000258888 PHF14O94880 888 aa16.67■□□□□ 0.26
ALPK3-201ENST00000258888 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
ALPK3-201ENST00000258888 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
ALPK3-201ENST00000258888 RASSF8Q8NHQ8 419 aa16.65■□□□□ 0.26
ALPK3-201ENST00000258888 CREBRFQ8IUR6 639 aa16.65■□□□□ 0.26
ALPK3-201ENST00000258888 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
ALPK3-201ENST00000258888 FOXD4L6Q3SYB3 417 aaPredicted RBP16.64■□□□□ 0.25
ALPK3-201ENST00000258888 FOXD4L3Q6VB84 417 aaPredicted RBP16.64■□□□□ 0.25
ALPK3-201ENST00000258888 ANKRD45Q5TZF3 282 aa16.64■□□□□ 0.25
ALPK3-201ENST00000258888 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
ALPK3-201ENST00000258888 COG6Q9Y2V7 657 aa16.64■□□□□ 0.25
ALPK3-201ENST00000258888 CGNL1Q0VF96 1302 aa16.63■□□□□ 0.25
ALPK3-201ENST00000258888 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
ALPK3-201ENST00000258888 CCDC34Q96HJ3 373 aa16.63■□□□□ 0.25
ALPK3-201ENST00000258888 RILPL2Q969X0 211 aa16.63■□□□□ 0.25
ALPK3-201ENST00000258888 ZKSCAN2Q63HK3 967 aa16.62■□□□□ 0.25
ALPK3-201ENST00000258888 E9PSI1 815 aa16.62■□□□□ 0.25
ALPK3-201ENST00000258888 PDE4CQ08493 712 aa16.62■□□□□ 0.25
ALPK3-201ENST00000258888 USP35Q9P2H5 1018 aa16.61■□□□□ 0.25
ALPK3-201ENST00000258888 CALRP27797 417 aaKnown RBP16.61■□□□□ 0.25
ALPK3-201ENST00000258888 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
ALPK3-201ENST00000258888 RSPH4AQ5TD94 716 aa16.6■□□□□ 0.25
ALPK3-201ENST00000258888 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
ALPK3-201ENST00000258888 SF3A1Q15459 793 aaKnown RBP16.58■□□□□ 0.25
ALPK3-201ENST00000258888 APAF1O14727 1248 aa16.58■□□□□ 0.24
ALPK3-201ENST00000258888 GSE1Q14687 1217 aa16.58■□□□□ 0.24
ALPK3-201ENST00000258888 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
ALPK3-201ENST00000258888 H3BQV1 296 aa16.58■□□□□ 0.24
ALPK3-201ENST00000258888 IFFO2Q5TF58 517 aa16.58■□□□□ 0.24
ALPK3-201ENST00000258888 UACAQ9BZF9 1416 aa16.57■□□□□ 0.24
ALPK3-201ENST00000258888 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
ALPK3-201ENST00000258888 GOLGA6L1Q8N7Z2 621 aa16.56■□□□□ 0.24
ALPK3-201ENST00000258888 CADPSQ9ULU8 1353 aa16.56■□□□□ 0.24
ALPK3-201ENST00000258888 TNNT3P45378 269 aaPredicted RBP16.56■□□□□ 0.24
ALPK3-201ENST00000258888 KIF3AQ9Y496 699 aa16.56■□□□□ 0.24
ALPK3-201ENST00000258888 COG3Q96JB2 828 aa16.55■□□□□ 0.24
ALPK3-201ENST00000258888 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
ALPK3-201ENST00000258888 EVC2Q86UK5 1308 aa16.55■□□□□ 0.24
ALPK3-201ENST00000258888 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
ALPK3-201ENST00000258888 TPM3P06753 285 aa16.53■□□□□ 0.24
ALPK3-201ENST00000258888 DIAPH3Q9NSV4 1193 aa16.53■□□□□ 0.24
ALPK3-201ENST00000258888 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
ALPK3-201ENST00000258888 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
ALPK3-201ENST00000258888 MCTP1Q6DN14 999 aa16.52■□□□□ 0.24
ALPK3-201ENST00000258888 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
ALPK3-201ENST00000258888 PES1O00541 588 aaKnown RBP16.52■□□□□ 0.24
ALPK3-201ENST00000258888 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.24
ALPK3-201ENST00000258888 FRAT2O75474 233 aaPredicted RBP16.52■□□□□ 0.23
ALPK3-201ENST00000258888 ATP6V1DQ9Y5K8 247 aa16.51■□□□□ 0.23
ALPK3-201ENST00000258888 JPH4Q96JJ6 628 aa16.51■□□□□ 0.23
ALPK3-201ENST00000258888 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
ALPK3-201ENST00000258888 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
ALPK3-201ENST00000258888 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
ALPK3-201ENST00000258888 DDX19BQ9UMR2 479 aa16.5■□□□□ 0.23
ALPK3-201ENST00000258888 DZIP1LQ8IYY4 767 aaKnown RBP16.5■□□□□ 0.23
ALPK3-201ENST00000258888 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
ALPK3-201ENST00000258888 REC8O95072 547 aa16.49■□□□□ 0.23
ALPK3-201ENST00000258888 CCAR2Q8N163 923 aaKnown RBP16.49■□□□□ 0.23
ALPK3-201ENST00000258888 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
ALPK3-201ENST00000258888 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
ALPK3-201ENST00000258888 KIF7Q2M1P5 1343 aa16.48■□□□□ 0.23
ALPK3-201ENST00000258888 BECN2A8MW95 431 aa16.48■□□□□ 0.23
ALPK3-201ENST00000258888 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms