RNA–Protein interactions for RNA: ENST00000257879.10

ITGA7-201, Transcript of integrin subunit alpha 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGA7, Length 4,120 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-201ENST00000257879 TCOF1Q13428 1488 aaKnown RBP22.84■■□□□ 1.25
ITGA7-201ENST00000257879 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
ITGA7-201ENST00000257879 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.25
ITGA7-201ENST00000257879 EIF3AQ14152 1382 aaKnown RBP22.83■■□□□ 1.25
ITGA7-201ENST00000257879 NGEFQ8N5V2 710 aa22.83■■□□□ 1.24
ITGA7-201ENST00000257879 PMFBP1Q8TBY8 1022 aa22.81■■□□□ 1.24
ITGA7-201ENST00000257879 IQGAP2Q13576 1575 aa22.81■■□□□ 1.24
ITGA7-201ENST00000257879 MAPK8IP3Q9UPT6 1336 aa22.81■■□□□ 1.24
ITGA7-201ENST00000257879 KANK1Q14678 1352 aa22.8■■□□□ 1.24
ITGA7-201ENST00000257879 SLC4A3P48751 1232 aa22.8■■□□□ 1.24
ITGA7-201ENST00000257879 TRIM44Q96DX7 344 aaPredicted RBP22.8■■□□□ 1.24
ITGA7-201ENST00000257879 CGNL1Q0VF96 1302 aa22.79■■□□□ 1.24
ITGA7-201ENST00000257879 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
ITGA7-201ENST00000257879 E9PSI1 815 aa22.79■■□□□ 1.24
ITGA7-201ENST00000257879 MORC1Q86VD1 984 aa22.79■■□□□ 1.24
ITGA7-201ENST00000257879 CENPJQ9HC77 1338 aaPredicted RBP22.78■■□□□ 1.24
ITGA7-201ENST00000257879 NFKBIBQ15653 356 aa22.78■■□□□ 1.24
ITGA7-201ENST00000257879 RWDD1Q9H446 243 aaPredicted RBP22.78■■□□□ 1.24
ITGA7-201ENST00000257879 EFCAB2Q5VUJ9 269 aa22.77■■□□□ 1.24
ITGA7-201ENST00000257879 GOLGA6L22H0YM25 854 aa22.76■■□□□ 1.23
ITGA7-201ENST00000257879 PRG4Q92954 1404 aaPredicted RBP22.76■■□□□ 1.23
ITGA7-201ENST00000257879 CCDC146Q8IYE0 955 aa22.76■■□□□ 1.23
ITGA7-201ENST00000257879 SLKQ9H2G2 1235 aaPredicted RBP22.76■■□□□ 1.23
ITGA7-201ENST00000257879 C9orf84Q5VXU9 1444 aa22.75■■□□□ 1.23
ITGA7-201ENST00000257879 MYH16Q9H6N6 1097 aa22.74■■□□□ 1.23
ITGA7-201ENST00000257879 TNNT2P45379 298 aaPredicted RBP22.74■■□□□ 1.23
ITGA7-201ENST00000257879 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
ITGA7-201ENST00000257879 ADAMTS8Q9UP79 889 aa22.73■■□□□ 1.23
ITGA7-201ENST00000257879 STAC3Q96MF2 364 aa22.72■■□□□ 1.23
ITGA7-201ENST00000257879 HSCBQ8IWL3 235 aa22.72■■□□□ 1.23
ITGA7-201ENST00000257879 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
ITGA7-201ENST00000257879 CHMP4BQ9H444 224 aaKnown RBP22.71■■□□□ 1.23
ITGA7-201ENST00000257879 APAF1O14727 1248 aa22.7■■□□□ 1.22
ITGA7-201ENST00000257879 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.22
ITGA7-201ENST00000257879 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.69■■□□□ 1.22
ITGA7-201ENST00000257879 CAMSAP2Q08AD1 1489 aa22.68■■□□□ 1.22
ITGA7-201ENST00000257879 NBPF1Q3BBV0 1214 aa22.68■■□□□ 1.22
ITGA7-201ENST00000257879 NAP1L5Q96NT1 182 aaPredicted RBP22.67■■□□□ 1.22
ITGA7-201ENST00000257879 RNF123Q5XPI4 1314 aa22.67■■□□□ 1.22
ITGA7-201ENST00000257879 PTPRGP23470 1445 aa22.66■■□□□ 1.22
ITGA7-201ENST00000257879 DHX29Q7Z478 1369 aaKnown RBP22.65■■□□□ 1.22
ITGA7-201ENST00000257879 NPM1P06748 294 aaKnown RBP eCLIP22.64■■□□□ 1.22
ITGA7-201ENST00000257879 IL27Q8NEV9 243 aa22.64■■□□□ 1.21
ITGA7-201ENST00000257879 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
ITGA7-201ENST00000257879 HSP90AB1P08238 724 aaKnown RBP22.63■■□□□ 1.21
ITGA7-201ENST00000257879 PPP2R1AP30153 589 aa22.63■■□□□ 1.21
ITGA7-201ENST00000257879 AAMPQ13685 434 aa22.63■■□□□ 1.21
ITGA7-201ENST00000257879 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
ITGA7-201ENST00000257879 PLEKHH2Q8IVE3 1493 aa22.62■■□□□ 1.21
ITGA7-201ENST00000257879 GOLGA6L3A6NEY3 463 aa22.62■■□□□ 1.21
ITGA7-201ENST00000257879 COG6Q9Y2V7 657 aa22.61■■□□□ 1.21
ITGA7-201ENST00000257879 RALGAPBQ86X10 1494 aa22.61■■□□□ 1.21
ITGA7-201ENST00000257879 U2SURPO15042 1029 aaKnown RBP22.6■■□□□ 1.21
ITGA7-201ENST00000257879 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
ITGA7-201ENST00000257879 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
ITGA7-201ENST00000257879 TEX14Q8IWB6 1497 aa22.59■■□□□ 1.21
ITGA7-201ENST00000257879 IPO8O15397 1037 aaKnown RBP22.59■■□□□ 1.21
ITGA7-201ENST00000257879 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
ITGA7-201ENST00000257879 SPRYD3Q8NCJ5 442 aa22.59■■□□□ 1.21
ITGA7-201ENST00000257879 U2AF1L5P0DN76 240 aaPredicted RBP22.58■■□□□ 1.21
ITGA7-201ENST00000257879 U2AF1Q01081 240 aaKnown RBP eCLIP22.58■■□□□ 1.21
ITGA7-201ENST00000257879 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.21
ITGA7-201ENST00000257879 STAG3Q9UJ98 1225 aa22.58■■□□□ 1.2
ITGA7-201ENST00000257879 CLUAP1Q96AJ1 413 aa22.57■■□□□ 1.2
ITGA7-201ENST00000257879 PTMSP20962 102 aa22.57■■□□□ 1.2
ITGA7-201ENST00000257879 SAMD9Q5K651 1589 aa22.56■■□□□ 1.2
ITGA7-201ENST00000257879 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
ITGA7-201ENST00000257879 PDE3AQ14432 1141 aa22.55■■□□□ 1.2
ITGA7-201ENST00000257879 GBP4Q96PP9 640 aa22.55■■□□□ 1.2
ITGA7-201ENST00000257879 GCC2Q8IWJ2 1684 aa22.54■■□□□ 1.2
ITGA7-201ENST00000257879 BRPF3Q9ULD4 1205 aa22.53■■□□□ 1.2
ITGA7-201ENST00000257879 MFAP1P55081 439 aaKnown RBP22.53■■□□□ 1.2
ITGA7-201ENST00000257879 GZF1Q9H116 711 aaPredicted RBP22.53■■□□□ 1.2
ITGA7-201ENST00000257879 FRAT2O75474 233 aaPredicted RBP22.52■■□□□ 1.2
ITGA7-201ENST00000257879 LRPPRCP42704 1394 aaKnown RBP22.52■■□□□ 1.2
ITGA7-201ENST00000257879 SYNJ2O15056 1496 aa22.52■■□□□ 1.19
ITGA7-201ENST00000257879 KIF3BO15066 747 aa22.51■■□□□ 1.19
ITGA7-201ENST00000257879 ITPRIPQ8IWB1 547 aa22.51■■□□□ 1.19
ITGA7-201ENST00000257879 CFAP44Q96MT7 982 aa22.51■■□□□ 1.19
ITGA7-201ENST00000257879 SMC4Q9NTJ3 1288 aa22.51■■□□□ 1.19
ITGA7-201ENST00000257879 KIF21AQ7Z4S6 1674 aa22.5■■□□□ 1.19
ITGA7-201ENST00000257879 GPATCH8Q9UKJ3 1502 aaKnown RBP22.5■■□□□ 1.19
ITGA7-201ENST00000257879 CASC1Q6TDU7 716 aa22.49■■□□□ 1.19
ITGA7-201ENST00000257879 PARD3Q8TEW0 1356 aa22.49■■□□□ 1.19
ITGA7-201ENST00000257879 NINLQ9Y2I6 1382 aa22.49■■□□□ 1.19
ITGA7-201ENST00000257879 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
ITGA7-201ENST00000257879 ANO8Q9HCE9 1232 aaPredicted RBP22.48■■□□□ 1.19
ITGA7-201ENST00000257879 RRP7AQ9Y3A4 280 aaKnown RBP22.48■■□□□ 1.19
ITGA7-201ENST00000257879 WDR62O43379 1518 aa22.48■■□□□ 1.19
ITGA7-201ENST00000257879 NCLP19338 710 aaKnown RBP22.48■■□□□ 1.19
ITGA7-201ENST00000257879 DDX11L8A8MPP1 907 aa22.47■■□□□ 1.19
ITGA7-201ENST00000257879 SLFN5Q08AF3 891 aa22.47■■□□□ 1.19
ITGA7-201ENST00000257879 RUNDC1Q96C34 613 aa22.47■■□□□ 1.19
ITGA7-201ENST00000257879 PZPP20742 1482 aa22.47■■□□□ 1.19
ITGA7-201ENST00000257879 DNMT1P26358 1616 aaKnown RBP22.46■■□□□ 1.19
ITGA7-201ENST00000257879 C20orf194Q5TEA3 1177 aa22.45■■□□□ 1.18
ITGA7-201ENST00000257879 ARHGEF12Q9NZN5 1544 aa22.45■■□□□ 1.18
ITGA7-201ENST00000257879 UHRF1BP1Q6BDS2 1440 aa22.45■■□□□ 1.18
ITGA7-201ENST00000257879 PANK1Q8TE04 598 aa22.45■■□□□ 1.18
ITGA7-201ENST00000257879 CHMP5Q9NZZ3 219 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms