RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
SEMA6A-201ENST00000257414 PTPRGP23470 1445 aa13.05□□□□□ -0.32
SEMA6A-201ENST00000257414 KIAA0586Q9BVV6 1533 aa13.05□□□□□ -0.32
SEMA6A-201ENST00000257414 MS4A1P11836 297 aa13.04□□□□□ -0.32
SEMA6A-201ENST00000257414 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
SEMA6A-201ENST00000257414 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEMA6A-201ENST00000257414 CAMSAP2Q08AD1 1489 aa13.03□□□□□ -0.32
SEMA6A-201ENST00000257414 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
SEMA6A-201ENST00000257414 KANK1Q14678 1352 aa13.03□□□□□ -0.32
SEMA6A-201ENST00000257414 SLC24A1O60721 1099 aa13.02□□□□□ -0.32
SEMA6A-201ENST00000257414 IFT140Q96RY7 1462 aa13.02□□□□□ -0.32
SEMA6A-201ENST00000257414 HSP90AA1P07900 732 aaKnown RBP13.02□□□□□ -0.32
SEMA6A-201ENST00000257414 MORC1Q86VD1 984 aa13□□□□□ -0.33
SEMA6A-201ENST00000257414 FTSJ3Q8IY81 847 aaKnown RBP13□□□□□ -0.33
SEMA6A-201ENST00000257414 CENPQQ7L2Z9 268 aaPredicted RBP13□□□□□ -0.33
SEMA6A-201ENST00000257414 SLC4A3P48751 1232 aa12.99□□□□□ -0.33
SEMA6A-201ENST00000257414 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
SEMA6A-201ENST00000257414 SPAG9O60271 1321 aaKnown RBP12.99□□□□□ -0.33
SEMA6A-201ENST00000257414 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
SEMA6A-201ENST00000257414 USP35Q9P2H5 1018 aa12.98□□□□□ -0.33
SEMA6A-201ENST00000257414 EIF3AQ14152 1382 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-201ENST00000257414 ADAMTS8Q9UP79 889 aa12.97□□□□□ -0.33
SEMA6A-201ENST00000257414 SAMD9Q5K651 1589 aa12.97□□□□□ -0.33
SEMA6A-201ENST00000257414 KIF3BO15066 747 aa12.96□□□□□ -0.33
SEMA6A-201ENST00000257414 FAM161AQ3B820 660 aa12.96□□□□□ -0.33
SEMA6A-201ENST00000257414 APAF1O14727 1248 aa12.96□□□□□ -0.34
SEMA6A-201ENST00000257414 MAGI3Q5TCQ9 1506 aa12.95□□□□□ -0.34
SEMA6A-201ENST00000257414 U2SURPO15042 1029 aaKnown RBP12.95□□□□□ -0.34
SEMA6A-201ENST00000257414 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
SEMA6A-201ENST00000257414 ZNF608Q9ULD9 1512 aaPredicted RBP12.94□□□□□ -0.34
SEMA6A-201ENST00000257414 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
SEMA6A-201ENST00000257414 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
SEMA6A-201ENST00000257414 WDR62O43379 1518 aa12.94□□□□□ -0.34
SEMA6A-201ENST00000257414 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
SEMA6A-201ENST00000257414 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
SEMA6A-201ENST00000257414 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
SEMA6A-201ENST00000257414 NUP153P49790 1475 aaKnown RBP12.93□□□□□ -0.34
SEMA6A-201ENST00000257414 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
SEMA6A-201ENST00000257414 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-201ENST00000257414 SLKQ9H2G2 1235 aaPredicted RBP12.92□□□□□ -0.34
SEMA6A-201ENST00000257414 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 TEX14Q8IWB6 1497 aa12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 GCC2Q8IWJ2 1684 aa12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 E9PSI1 815 aa12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 PPP2R1AP30153 589 aa12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 CLUAP1Q96AJ1 413 aa12.91□□□□□ -0.34
SEMA6A-201ENST00000257414 DHX29Q7Z478 1369 aaKnown RBP12.9□□□□□ -0.34
SEMA6A-201ENST00000257414 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
SEMA6A-201ENST00000257414 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.34
SEMA6A-201ENST00000257414 RAPGEF6Q8TEU7 1601 aa12.9□□□□□ -0.34
SEMA6A-201ENST00000257414 MAGI1Q96QZ7 1491 aaPredicted RBP12.9□□□□□ -0.34
SEMA6A-201ENST00000257414 GGT6Q6P531 493 aa12.9□□□□□ -0.34
SEMA6A-201ENST00000257414 ERBINQ96RT1 1412 aa12.9□□□□□ -0.34
SEMA6A-201ENST00000257414 KDM6BO15054 1643 aa12.89□□□□□ -0.35
SEMA6A-201ENST00000257414 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
SEMA6A-201ENST00000257414 COG6Q9Y2V7 657 aa12.89□□□□□ -0.35
SEMA6A-201ENST00000257414 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
SEMA6A-201ENST00000257414 RALGAPBQ86X10 1494 aa12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 PZPP20742 1482 aa12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 GSE1Q14687 1217 aa12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 PMFBP1Q8TBY8 1022 aa12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
SEMA6A-201ENST00000257414 CGNL1Q0VF96 1302 aa12.87□□□□□ -0.35
SEMA6A-201ENST00000257414 SKAP1Q86WV1 359 aa12.87□□□□□ -0.35
SEMA6A-201ENST00000257414 ANP32BQ92688 251 aaKnown RBP12.87□□□□□ -0.35
SEMA6A-201ENST00000257414 BCL2L13Q9BXK5 485 aa12.87□□□□□ -0.35
SEMA6A-201ENST00000257414 SRPK2P78362 688 aaKnown RBP12.87□□□□□ -0.35
SEMA6A-201ENST00000257414 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
SEMA6A-201ENST00000257414 POGKQ9P215 609 aa12.86□□□□□ -0.35
SEMA6A-201ENST00000257414 KIF14Q15058 1648 aa12.86□□□□□ -0.35
SEMA6A-201ENST00000257414 KIAA0556O60303 1618 aa12.85□□□□□ -0.35
SEMA6A-201ENST00000257414 NFKBIBQ15653 356 aa12.85□□□□□ -0.35
SEMA6A-201ENST00000257414 SPATA31E1Q6ZUB1 1445 aa12.84□□□□□ -0.35
SEMA6A-201ENST00000257414 ITSN2Q9NZM3 1697 aa12.84□□□□□ -0.35
SEMA6A-201ENST00000257414 STK26Q9P289 416 aa12.84□□□□□ -0.35
SEMA6A-201ENST00000257414 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
SEMA6A-201ENST00000257414 AFAP1Q8N556 730 aa12.83□□□□□ -0.36
SEMA6A-201ENST00000257414 ITPRIPQ8IWB1 547 aa12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 HSCBQ8IWL3 235 aa12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 PANK1Q8TE04 598 aa12.82□□□□□ -0.36
SEMA6A-201ENST00000257414 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
SEMA6A-201ENST00000257414 BCAR3O75815 825 aa12.81□□□□□ -0.36
SEMA6A-201ENST00000257414 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-201ENST00000257414 ESF1Q9H501 851 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-201ENST00000257414 MFAP1P55081 439 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-201ENST00000257414 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-201ENST00000257414 DISP1Q96F81 1524 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms