RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 KIAA0586Q9BVV6 1533 aa15.36■□□□□ 0.05
VRTN-201ENST00000256362 RCAN3Q9UKA8 241 aa15.36■□□□□ 0.05
VRTN-201ENST00000256362 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
VRTN-201ENST00000256362 FRAT1Q92837 279 aaPredicted RBP15.36■□□□□ 0.05
VRTN-201ENST00000256362 GSE1Q14687 1217 aa15.35■□□□□ 0.05
VRTN-201ENST00000256362 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
VRTN-201ENST00000256362 RRP1P56182 461 aaKnown RBP15.34■□□□□ 0.05
VRTN-201ENST00000256362 JPH4Q96JJ6 628 aa15.34■□□□□ 0.05
VRTN-201ENST00000256362 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
VRTN-201ENST00000256362 MYBBP1AQ9BQG0 1328 aaKnown RBP15.33■□□□□ 0.04
VRTN-201ENST00000256362 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
VRTN-201ENST00000256362 KIF15Q9NS87 1388 aa15.33■□□□□ 0.04
VRTN-201ENST00000256362 KIF14Q15058 1648 aa15.32■□□□□ 0.04
VRTN-201ENST00000256362 NFKBIBQ15653 356 aa15.32■□□□□ 0.04
VRTN-201ENST00000256362 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
VRTN-201ENST00000256362 RAPGEF6Q8TEU7 1601 aa15.3■□□□□ 0.04
VRTN-201ENST00000256362 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
VRTN-201ENST00000256362 NAP1L5Q96NT1 182 aaPredicted RBP15.29■□□□□ 0.04
VRTN-201ENST00000256362 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
VRTN-201ENST00000256362 SLKQ9H2G2 1235 aaPredicted RBP15.28■□□□□ 0.04
VRTN-201ENST00000256362 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
VRTN-201ENST00000256362 C9orf84Q5VXU9 1444 aa15.28■□□□□ 0.04
VRTN-201ENST00000256362 PANK3Q9H999 370 aa15.27■□□□□ 0.04
VRTN-201ENST00000256362 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.03
VRTN-201ENST00000256362 NLRP13Q86W25 1043 aa15.27■□□□□ 0.03
VRTN-201ENST00000256362 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.03
VRTN-201ENST00000256362 RALBP1Q15311 655 aa15.26■□□□□ 0.03
VRTN-201ENST00000256362 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
VRTN-201ENST00000256362 CRBNQ96SW2 442 aa15.26■□□□□ 0.03
VRTN-201ENST00000256362 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
VRTN-201ENST00000256362 RNF123Q5XPI4 1314 aa15.26■□□□□ 0.03
VRTN-201ENST00000256362 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
VRTN-201ENST00000256362 C20orf194Q5TEA3 1177 aa15.25■□□□□ 0.03
VRTN-201ENST00000256362 MBD5Q9P267 1494 aa15.25■□□□□ 0.03
VRTN-201ENST00000256362 KDM5CP41229 1560 aa15.24■□□□□ 0.03
VRTN-201ENST00000256362 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
VRTN-201ENST00000256362 VSIG10Q8N0Z9 540 aa15.23■□□□□ 0.03
VRTN-201ENST00000256362 BRD4O60885 1362 aaPredicted RBP15.23■□□□□ 0.03
VRTN-201ENST00000256362 BACH2Q9BYV9 841 aa15.22■□□□□ 0.03
VRTN-201ENST00000256362 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
VRTN-201ENST00000256362 UBE2Q2Q8WVN8 375 aa15.21■□□□□ 0.03
VRTN-201ENST00000256362 RALGAPBQ86X10 1494 aa15.2■□□□□ 0.02
VRTN-201ENST00000256362 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
VRTN-201ENST00000256362 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
VRTN-201ENST00000256362 CCDC144AA2RUR9 1427 aa15.2■□□□□ 0.02
VRTN-201ENST00000256362 CARMIL2Q6F5E8 1435 aa15.2■□□□□ 0.02
VRTN-201ENST00000256362 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
VRTN-201ENST00000256362 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
VRTN-201ENST00000256362 NUP160Q12769 1436 aa15.17■□□□□ 0.02
VRTN-201ENST00000256362 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
VRTN-201ENST00000256362 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
VRTN-201ENST00000256362 PER1O15534 1290 aaPredicted RBP15.16■□□□□ 0.02
VRTN-201ENST00000256362 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
VRTN-201ENST00000256362 WDR43Q15061 677 aaKnown RBP eCLIP15.16■□□□□ 0.02
VRTN-201ENST00000256362 GLIPR1L2Q4G1C9 344 aa15.15■□□□□ 0.02
VRTN-201ENST00000256362 ATP10BO94823 1461 aa15.14■□□□□ 0.01
VRTN-201ENST00000256362 TMF1P82094 1093 aa15.14■□□□□ 0.01
VRTN-201ENST00000256362 PKNOX2Q96KN3 472 aa15.14■□□□□ 0.01
VRTN-201ENST00000256362 ADGRL2O95490 1459 aa15.13■□□□□ 0.01
VRTN-201ENST00000256362 KNSTRNQ9Y448 316 aa15.13■□□□□ 0.01
VRTN-201ENST00000256362 ADCY10Q96PN6 1610 aa15.13■□□□□ 0.01
VRTN-201ENST00000256362 ADGBQ8N7X0 1667 aa15.13■□□□□ 0.01
VRTN-201ENST00000256362 ITSN2Q9NZM3 1697 aa15.13■□□□□ 0.01
VRTN-201ENST00000256362 ARID3AQ99856 593 aa15.13■□□□□ 0.01
VRTN-201ENST00000256362 UHRF1BP1Q6BDS2 1440 aa15.13■□□□□ 0.01
VRTN-201ENST00000256362 TESK2Q96S53 571 aa15.12■□□□□ 0.01
VRTN-201ENST00000256362 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
VRTN-201ENST00000256362 TNNT2P45379 298 aaPredicted RBP15.11■□□□□ 0.01
VRTN-201ENST00000256362 POGKQ9P215 609 aa15.11■□□□□ 0.01
VRTN-201ENST00000256362 NEUROD2Q15784 382 aa15.1■□□□□ 0.01
VRTN-201ENST00000256362 PDE3BQ13370 1112 aa15.09■□□□□ 0.01
VRTN-201ENST00000256362 PRAG1Q86YV5 1406 aa15.09■□□□□ 0.01
VRTN-201ENST00000256362 ABCA8O94911 1581 aa15.09■□□□□ 0.01
VRTN-201ENST00000256362 PTPRGP23470 1445 aa15.08■□□□□ 0.01
VRTN-201ENST00000256362 RSPH6AQ9H0K4 717 aa15.08■□□□□ 0.01
VRTN-201ENST00000256362 FAM135AQ9P2D6 1515 aa15.08■□□□□ 0
VRTN-201ENST00000256362 CROCC2H7BZ55 1655 aa15.08■□□□□ 0
VRTN-201ENST00000256362 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
VRTN-201ENST00000256362 ERBINQ96RT1 1412 aa15.06■□□□□ 0
VRTN-201ENST00000256362 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
VRTN-201ENST00000256362 PPP2R1AP30153 589 aa15.06■□□□□ 0
VRTN-201ENST00000256362 PNNQ9H307 717 aaKnown RBP15.06■□□□□ 0
VRTN-201ENST00000256362 APAF1O14727 1248 aa15.05■□□□□ -0
VRTN-201ENST00000256362 ABCC10Q5T3U5 1492 aa15.05■□□□□ -0
VRTN-201ENST00000256362 A2MP01023 1474 aa15.05■□□□□ -0
VRTN-201ENST00000256362 PLEKHH1Q9ULM0 1364 aa15.04■□□□□ -0
VRTN-201ENST00000256362 ARHGEF12Q9NZN5 1544 aa15.04■□□□□ -0
VRTN-201ENST00000256362 BCAR3O75815 825 aa15.04■□□□□ -0
VRTN-201ENST00000256362 MS4A1P11836 297 aa15.04■□□□□ -0
VRTN-201ENST00000256362 WASHC2CQ9Y4E1 1318 aa15.04■□□□□ -0
VRTN-201ENST00000256362 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
VRTN-201ENST00000256362 ARHGAP5Q13017 1502 aa15.03■□□□□ -0
VRTN-201ENST00000256362 CHGAP10645 457 aaKnown RBP15.02■□□□□ -0
VRTN-201ENST00000256362 GOLGA2Q08379 1002 aa15.02■□□□□ -0
VRTN-201ENST00000256362 PLA2R1Q13018 1463 aa15.02■□□□□ -0
VRTN-201ENST00000256362 CCDC141Q6ZP82 1450 aa15.02■□□□□ -0
VRTN-201ENST00000256362 SYCP2Q9BX26 1530 aa15.02■□□□□ -0
VRTN-201ENST00000256362 KDM5DQ9BY66 1539 aa15.02□□□□□ -0.01
VRTN-201ENST00000256362 FAM161AQ3B820 660 aa15.02□□□□□ -0.01
VRTN-201ENST00000256362 HSP90AA2PQ14568 343 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms