RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 NAIPQ13075 1403 aa24.44■■□□□ 1.5
PPFIA1-201ENST00000253925 PLIN1O60240 522 aa24.43■■□□□ 1.5
PPFIA1-201ENST00000253925 HDGFP51858 240 aaKnown RBP24.43■■□□□ 1.5
PPFIA1-201ENST00000253925 CALD1Q05682 793 aaKnown RBP24.43■■□□□ 1.5
PPFIA1-201ENST00000253925 BRD4O60885 1362 aaPredicted RBP24.43■■□□□ 1.5
PPFIA1-201ENST00000253925 CFAP44Q96MT7 982 aa24.42■■□□□ 1.5
PPFIA1-201ENST00000253925 USP35Q9P2H5 1018 aa24.41■■□□□ 1.5
PPFIA1-201ENST00000253925 ZBTB7CA1YPR0 619 aa24.41■■□□□ 1.5
PPFIA1-201ENST00000253925 CRBNQ96SW2 442 aa24.41■■□□□ 1.5
PPFIA1-201ENST00000253925 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
PPFIA1-201ENST00000253925 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
PPFIA1-201ENST00000253925 E9PSI1 815 aa24.4■■□□□ 1.5
PPFIA1-201ENST00000253925 ITPRIPQ8IWB1 547 aa24.4■■□□□ 1.5
PPFIA1-201ENST00000253925 PCF11O94913 1555 aaKnown RBP24.4■■□□□ 1.5
PPFIA1-201ENST00000253925 STAC3Q96MF2 364 aa24.39■■□□□ 1.5
PPFIA1-201ENST00000253925 SUPT6HQ7KZ85 1726 aaKnown RBP24.39■■□□□ 1.5
PPFIA1-201ENST00000253925 TERF2IPQ9NYB0 399 aa24.39■■□□□ 1.49
PPFIA1-201ENST00000253925 NGEFQ8N5V2 710 aa24.38■■□□□ 1.49
PPFIA1-201ENST00000253925 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
PPFIA1-201ENST00000253925 SMC4Q9NTJ3 1288 aa24.38■■□□□ 1.49
PPFIA1-201ENST00000253925 HECW1Q76N89 1606 aa24.37■■□□□ 1.49
PPFIA1-201ENST00000253925 FAM161AQ3B820 660 aa24.37■■□□□ 1.49
PPFIA1-201ENST00000253925 TRAK1Q9UPV9 953 aa24.36■■□□□ 1.49
PPFIA1-201ENST00000253925 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
PPFIA1-201ENST00000253925 SLKQ9H2G2 1235 aaPredicted RBP24.36■■□□□ 1.49
PPFIA1-201ENST00000253925 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
PPFIA1-201ENST00000253925 CLUAP1Q96AJ1 413 aa24.35■■□□□ 1.49
PPFIA1-201ENST00000253925 SPRYD3Q8NCJ5 442 aa24.34■■□□□ 1.49
PPFIA1-201ENST00000253925 CC2D2AQ9P2K1 1620 aa24.34■■□□□ 1.49
PPFIA1-201ENST00000253925 CGNL1Q0VF96 1302 aa24.34■■□□□ 1.49
PPFIA1-201ENST00000253925 APAF1O14727 1248 aa24.32■■□□□ 1.48
PPFIA1-201ENST00000253925 TROQ12816 1431 aaPredicted RBP24.31■■□□□ 1.48
PPFIA1-201ENST00000253925 DAPK1P53355 1430 aa24.31■■□□□ 1.48
PPFIA1-201ENST00000253925 PTMAP06454 111 aaKnown RBP24.3■■□□□ 1.48
PPFIA1-201ENST00000253925 ROCK1Q13464 1354 aa24.28■■□□□ 1.48
PPFIA1-201ENST00000253925 MLECQ14165 292 aa24.28■■□□□ 1.48
PPFIA1-201ENST00000253925 PLEKHG5O94827 1062 aa24.28■■□□□ 1.48
PPFIA1-201ENST00000253925 DNTTIP2Q5QJE6 756 aaKnown RBP24.28■■□□□ 1.48
PPFIA1-201ENST00000253925 EPRSP07814 1512 aaKnown RBP24.27■■□□□ 1.48
PPFIA1-201ENST00000253925 RRP7AQ9Y3A4 280 aaKnown RBP24.27■■□□□ 1.48
PPFIA1-201ENST00000253925 CUL7Q14999 1698 aa24.26■■□□□ 1.47
PPFIA1-201ENST00000253925 GBP4Q96PP9 640 aa24.25■■□□□ 1.47
PPFIA1-201ENST00000253925 MFAP1P55081 439 aaKnown RBP24.24■■□□□ 1.47
PPFIA1-201ENST00000253925 RTF1Q92541 710 aaKnown RBP24.24■■□□□ 1.47
PPFIA1-201ENST00000253925 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
PPFIA1-201ENST00000253925 PRG4Q92954 1404 aaPredicted RBP24.24■■□□□ 1.47
PPFIA1-201ENST00000253925 IFT140Q96RY7 1462 aa24.24■■□□□ 1.47
PPFIA1-201ENST00000253925 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
PPFIA1-201ENST00000253925 C9orf84Q5VXU9 1444 aa24.24■■□□□ 1.47
PPFIA1-201ENST00000253925 PTMSP20962 102 aa24.23■■□□□ 1.47
PPFIA1-201ENST00000253925 CCDC184Q52MB2 194 aa24.23■■□□□ 1.47
PPFIA1-201ENST00000253925 VGFO15240 615 aaPredicted RBP24.23■■□□□ 1.47
PPFIA1-201ENST00000253925 EVC2Q86UK5 1308 aa24.22■■□□□ 1.47
PPFIA1-201ENST00000253925 MCCP23508 829 aa24.22■■□□□ 1.47
PPFIA1-201ENST00000253925 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
PPFIA1-201ENST00000253925 NUTM2DQ5VT03 806 aaPredicted RBP24.21■■□□□ 1.47
PPFIA1-201ENST00000253925 UNC13AQ9UPW8 1703 aa24.21■■□□□ 1.47
PPFIA1-201ENST00000253925 SOX12O15370 315 aa24.21■■□□□ 1.47
PPFIA1-201ENST00000253925 COG6Q9Y2V7 657 aa24.2■■□□□ 1.47
PPFIA1-201ENST00000253925 OS9Q13438 667 aaPredicted RBP24.19■■□□□ 1.46
PPFIA1-201ENST00000253925 ZKSCAN2Q63HK3 967 aa24.19■■□□□ 1.46
PPFIA1-201ENST00000253925 SMG6Q86US8 1419 aaKnown RBP24.19■■□□□ 1.46
PPFIA1-201ENST00000253925 LMOD3Q0VAK6 560 aa24.18■■□□□ 1.46
PPFIA1-201ENST00000253925 PTPN23Q9H3S7 1636 aa24.17■■□□□ 1.46
PPFIA1-201ENST00000253925 CDK13Q14004 1512 aaKnown RBP24.17■■□□□ 1.46
PPFIA1-201ENST00000253925 BCL2L13Q9BXK5 485 aa24.17■■□□□ 1.46
PPFIA1-201ENST00000253925 ADAMTS8Q9UP79 889 aa24.17■■□□□ 1.46
PPFIA1-201ENST00000253925 ANKRD30BQ9BXX2 1392 aa24.16■■□□□ 1.46
PPFIA1-201ENST00000253925 AKNAQ7Z591 1439 aa24.16■■□□□ 1.46
PPFIA1-201ENST00000253925 KIAA0586Q9BVV6 1533 aa24.15■■□□□ 1.46
PPFIA1-201ENST00000253925 SLC4A3P48751 1232 aa24.15■■□□□ 1.46
PPFIA1-201ENST00000253925 NBPF1Q3BBV0 1214 aa24.15■■□□□ 1.46
PPFIA1-201ENST00000253925 CDCA7LQ96GN5 454 aa24.14■■□□□ 1.46
PPFIA1-201ENST00000253925 CDK11BP21127 795 aaKnown RBP24.14■■□□□ 1.45
PPFIA1-201ENST00000253925 GZF1Q9H116 711 aaPredicted RBP24.14■■□□□ 1.45
PPFIA1-201ENST00000253925 APBB1O00213 710 aa24.13■■□□□ 1.45
PPFIA1-201ENST00000253925 IQGAP2Q13576 1575 aa24.13■■□□□ 1.45
PPFIA1-201ENST00000253925 ARHGAP5Q13017 1502 aa24.13■■□□□ 1.45
PPFIA1-201ENST00000253925 RUNDC1Q96C34 613 aa24.12■■□□□ 1.45
PPFIA1-201ENST00000253925 GSE1Q14687 1217 aa24.11■■□□□ 1.45
PPFIA1-201ENST00000253925 GOLGA6L3A6NEY3 463 aa24.11■■□□□ 1.45
PPFIA1-201ENST00000253925 KCNJ4P48050 445 aa24.1■■□□□ 1.45
PPFIA1-201ENST00000253925 TPRNQ4KMQ1 711 aa24.1■■□□□ 1.45
PPFIA1-201ENST00000253925 LMOD2Q6P5Q4 547 aa24.1■■□□□ 1.45
PPFIA1-201ENST00000253925 MAPKBP1O60336 1514 aa24.09■■□□□ 1.45
PPFIA1-201ENST00000253925 PPP2R1AP30153 589 aa24.09■■□□□ 1.45
PPFIA1-201ENST00000253925 LAMC3Q9Y6N6 1575 aa24.09■■□□□ 1.45
PPFIA1-201ENST00000253925 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
PPFIA1-201ENST00000253925 AAMPQ13685 434 aa24.09■■□□□ 1.45
PPFIA1-201ENST00000253925 C11orf95C9JLR9 678 aaPredicted RBP24.08■■□□□ 1.44
PPFIA1-201ENST00000253925 HMMRO75330 724 aa24.08■■□□□ 1.44
PPFIA1-201ENST00000253925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.08■■□□□ 1.447e-6■■■■□ 19.6
PPFIA1-201ENST00000253925 ZRSR1Q15695 479 aaKnown RBP24.07■■□□□ 1.44
PPFIA1-201ENST00000253925 ABCC5O15440 1437 aa24.06■■□□□ 1.44
PPFIA1-201ENST00000253925 MSNP26038 577 aaKnown RBP24.06■■□□□ 1.44
PPFIA1-201ENST00000253925 DDX19BQ9UMR2 479 aa24.06■■□□□ 1.44
PPFIA1-201ENST00000253925 STK31Q9BXU1 1019 aa24.06■■□□□ 1.44
PPFIA1-201ENST00000253925 PLEKHH2Q8IVE3 1493 aa24.05■■□□□ 1.44
PPFIA1-201ENST00000253925 PRKCSHP14314 528 aaPredicted RBP24.05■■□□□ 1.44
PPFIA1-201ENST00000253925 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms