RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 USP47Q96K76 1375 aa20.73■□□□□ 0.91
SLC6A8-201ENST00000253122 SMG6Q86US8 1419 aaKnown RBP20.72■□□□□ 0.91
SLC6A8-201ENST00000253122 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
SLC6A8-201ENST00000253122 NFKBIBQ15653 356 aa20.71■□□□□ 0.91
SLC6A8-201ENST00000253122 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
SLC6A8-201ENST00000253122 CDCA7LQ96GN5 454 aa20.71■□□□□ 0.91
SLC6A8-201ENST00000253122 GPATCH8Q9UKJ3 1502 aaKnown RBP20.71■□□□□ 0.91
SLC6A8-201ENST00000253122 DAPK1P53355 1430 aa20.71■□□□□ 0.91
SLC6A8-201ENST00000253122 RALBP1Q15311 655 aa20.7■□□□□ 0.9
SLC6A8-201ENST00000253122 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
SLC6A8-201ENST00000253122 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
SLC6A8-201ENST00000253122 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
SLC6A8-201ENST00000253122 BACH2Q9BYV9 841 aa20.7■□□□□ 0.9
SLC6A8-201ENST00000253122 CAMSAP2Q08AD1 1489 aa20.68■□□□□ 0.9
SLC6A8-201ENST00000253122 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
SLC6A8-201ENST00000253122 ABCC2Q92887 1545 aa20.68■□□□□ 0.9
SLC6A8-201ENST00000253122 MS4A1P11836 297 aa20.68■□□□□ 0.9
SLC6A8-201ENST00000253122 NLRP13Q86W25 1043 aa20.68■□□□□ 0.9
SLC6A8-201ENST00000253122 MYBBP1AQ9BQG0 1328 aaKnown RBP20.67■□□□□ 0.9
SLC6A8-201ENST00000253122 SLKQ9H2G2 1235 aaPredicted RBP20.67■□□□□ 0.9
SLC6A8-201ENST00000253122 ANKRD30AQ9BXX3 1397 aa20.66■□□□□ 0.9
SLC6A8-201ENST00000253122 FRAT1Q92837 279 aaPredicted RBP20.66■□□□□ 0.9
SLC6A8-201ENST00000253122 ABCC5O15440 1437 aa20.65■□□□□ 0.9
SLC6A8-201ENST00000253122 BECN1Q14457 450 aa20.65■□□□□ 0.9
SLC6A8-201ENST00000253122 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.9
SLC6A8-201ENST00000253122 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
SLC6A8-201ENST00000253122 KIF15Q9NS87 1388 aa20.64■□□□□ 0.89
SLC6A8-201ENST00000253122 PDE3BQ13370 1112 aa20.63■□□□□ 0.89
SLC6A8-201ENST00000253122 GLIPR1L2Q4G1C9 344 aa20.63■□□□□ 0.89
SLC6A8-201ENST00000253122 ARID4BQ4LE39 1312 aaPredicted RBP20.62■□□□□ 0.89
SLC6A8-201ENST00000253122 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
SLC6A8-201ENST00000253122 SPRYD3Q8NCJ5 442 aa20.62■□□□□ 0.89
SLC6A8-201ENST00000253122 NAP1L5Q96NT1 182 aaPredicted RBP20.62■□□□□ 0.89
SLC6A8-201ENST00000253122 NCOA1Q15788 1441 aa20.6■□□□□ 0.89
SLC6A8-201ENST00000253122 EFCAB2Q5VUJ9 269 aa20.6■□□□□ 0.89
SLC6A8-201ENST00000253122 ADCY10Q96PN6 1610 aa20.6■□□□□ 0.89
SLC6A8-201ENST00000253122 KNSTRNQ9Y448 316 aa20.6■□□□□ 0.89
SLC6A8-201ENST00000253122 RSPH4AQ5TD94 716 aa20.59■□□□□ 0.89
SLC6A8-201ENST00000253122 ARHGAP5Q13017 1502 aa20.59■□□□□ 0.89
SLC6A8-201ENST00000253122 DNMT1P26358 1616 aaKnown RBP20.58■□□□□ 0.88
SLC6A8-201ENST00000253122 NEUROD2Q15784 382 aa20.57■□□□□ 0.88
SLC6A8-201ENST00000253122 ABCC10Q5T3U5 1492 aa20.57■□□□□ 0.88
SLC6A8-201ENST00000253122 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
SLC6A8-201ENST00000253122 GZF1Q9H116 711 aaPredicted RBP20.56■□□□□ 0.88
SLC6A8-201ENST00000253122 ROCK2O75116 1388 aaKnown RBP20.56■□□□□ 0.88
SLC6A8-201ENST00000253122 FAM161AQ3B820 660 aa20.56■□□□□ 0.88
SLC6A8-201ENST00000253122 NUP155O75694 1391 aa20.56■□□□□ 0.88
SLC6A8-201ENST00000253122 UHRF1BP1LA0JNW5 1464 aa20.53■□□□□ 0.88
SLC6A8-201ENST00000253122 C9orf84Q5VXU9 1444 aa20.53■□□□□ 0.88
SLC6A8-201ENST00000253122 HSP90AA1P07900 732 aaKnown RBP20.51■□□□□ 0.87
SLC6A8-201ENST00000253122 CENPQQ7L2Z9 268 aaPredicted RBP20.5■□□□□ 0.87
SLC6A8-201ENST00000253122 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
SLC6A8-201ENST00000253122 ANKRD50Q9ULJ7 1429 aa20.49■□□□□ 0.87
SLC6A8-201ENST00000253122 PANK3Q9H999 370 aa20.49■□□□□ 0.87
SLC6A8-201ENST00000253122 CCDC146Q8IYE0 955 aa20.48■□□□□ 0.87
SLC6A8-201ENST00000253122 KDM5BQ9UGL1 1544 aa20.48■□□□□ 0.87
SLC6A8-201ENST00000253122 CDC42BPAQ5VT25 1732 aa20.48■□□□□ 0.87
SLC6A8-201ENST00000253122 PLEKHH2Q8IVE3 1493 aa20.48■□□□□ 0.87
SLC6A8-201ENST00000253122 CCDC141Q6ZP82 1450 aa20.47■□□□□ 0.87
SLC6A8-201ENST00000253122 TMF1P82094 1093 aa20.47■□□□□ 0.87
SLC6A8-201ENST00000253122 BRD4O60885 1362 aaPredicted RBP20.47■□□□□ 0.87
SLC6A8-201ENST00000253122 GOLGA2Q08379 1002 aa20.46■□□□□ 0.87
SLC6A8-201ENST00000253122 ZCCHC11Q5TAX3 1644 aaKnown RBP20.46■□□□□ 0.87
SLC6A8-201ENST00000253122 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
SLC6A8-201ENST00000253122 ANKRD30BQ9BXX2 1392 aa20.45■□□□□ 0.86
SLC6A8-201ENST00000253122 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
SLC6A8-201ENST00000253122 C20orf194Q5TEA3 1177 aa20.44■□□□□ 0.86
SLC6A8-201ENST00000253122 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
SLC6A8-201ENST00000253122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.44■□□□□ 0.862e-11■■■□□ 15.4
SLC6A8-201ENST00000253122 TRIM44Q96DX7 344 aaPredicted RBP20.42■□□□□ 0.86
SLC6A8-201ENST00000253122 WDR7Q9Y4E6 1490 aa20.42■□□□□ 0.86
SLC6A8-201ENST00000253122 SHANK2Q9UPX8 1470 aa20.41■□□□□ 0.86
SLC6A8-201ENST00000253122 TTC37Q6PGP7 1564 aa20.41■□□□□ 0.86
SLC6A8-201ENST00000253122 PLCH2O75038 1416 aa20.41■□□□□ 0.86
SLC6A8-201ENST00000253122 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
SLC6A8-201ENST00000253122 PNNQ9H307 717 aaKnown RBP20.41■□□□□ 0.86
SLC6A8-201ENST00000253122 PREX2Q70Z35 1606 aa20.41■□□□□ 0.86
SLC6A8-201ENST00000253122 ADGRL2O95490 1459 aa20.4■□□□□ 0.86
SLC6A8-201ENST00000253122 SYCP2Q9BX26 1530 aa20.39■□□□□ 0.86
SLC6A8-201ENST00000253122 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.86
SLC6A8-201ENST00000253122 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.86
SLC6A8-201ENST00000253122 SPAG9O60271 1321 aaKnown RBP20.39■□□□□ 0.85
SLC6A8-201ENST00000253122 ADGBQ8N7X0 1667 aa20.39■□□□□ 0.85
SLC6A8-201ENST00000253122 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
SLC6A8-201ENST00000253122 KDM6BO15054 1643 aa20.38■□□□□ 0.85
SLC6A8-201ENST00000253122 ASXL2Q76L83 1435 aa20.37■□□□□ 0.85
SLC6A8-201ENST00000253122 ANP32BQ92688 251 aaKnown RBP20.37■□□□□ 0.85
SLC6A8-201ENST00000253122 SAMD9LQ8IVG5 1584 aa20.36■□□□□ 0.85
SLC6A8-201ENST00000253122 RNF123Q5XPI4 1314 aa20.36■□□□□ 0.85
SLC6A8-201ENST00000253122 ARHGEF5Q12774 1597 aa20.36■□□□□ 0.85
SLC6A8-201ENST00000253122 KIAA1107Q9UPP5 1409 aa20.35■□□□□ 0.85
SLC6A8-201ENST00000253122 MBD5Q9P267 1494 aa20.34■□□□□ 0.85
SLC6A8-201ENST00000253122 GOLGA6L3A6NEY3 463 aa20.34■□□□□ 0.85
SLC6A8-201ENST00000253122 CLUAP1Q96AJ1 413 aa20.34■□□□□ 0.85
SLC6A8-201ENST00000253122 COG6Q9Y2V7 657 aa20.33■□□□□ 0.85
SLC6A8-201ENST00000253122 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.84
SLC6A8-201ENST00000253122 RPRD2Q5VT52 1461 aaKnown RBP20.33■□□□□ 0.84
SLC6A8-201ENST00000253122 CDC42BPBQ9Y5S2 1711 aa20.33■□□□□ 0.84
SLC6A8-201ENST00000253122 APAF1O14727 1248 aa20.32■□□□□ 0.84
SLC6A8-201ENST00000253122 DHX29Q7Z478 1369 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms