RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 TMC1Q8TDI8 760 aa16.99■□□□□ 0.31
COLGALT1-201ENST00000252599 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
COLGALT1-201ENST00000252599 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
COLGALT1-201ENST00000252599 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
COLGALT1-201ENST00000252599 RBM25P49756 843 aaKnown RBP16.98■□□□□ 0.31
COLGALT1-201ENST00000252599 CHGAP10645 457 aaKnown RBP16.97■□□□□ 0.31
COLGALT1-201ENST00000252599 TMEM51Q9NW97 253 aa16.97■□□□□ 0.31
COLGALT1-201ENST00000252599 POGKQ9P215 609 aa16.97■□□□□ 0.31
COLGALT1-201ENST00000252599 KCNG1Q9UIX4 513 aa16.97■□□□□ 0.31
COLGALT1-201ENST00000252599 PRXQ9BXM0 1461 aa16.97■□□□□ 0.31
COLGALT1-201ENST00000252599 PDE4AP27815 886 aa16.96■□□□□ 0.31
COLGALT1-201ENST00000252599 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
COLGALT1-201ENST00000252599 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
COLGALT1-201ENST00000252599 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
COLGALT1-201ENST00000252599 RGS22Q8NE09 1264 aa16.95■□□□□ 0.3
COLGALT1-201ENST00000252599 MTERF4Q7Z6M4 381 aaKnown RBP16.94■□□□□ 0.3
COLGALT1-201ENST00000252599 CUX1P39880 1505 aa16.93■□□□□ 0.3
COLGALT1-201ENST00000252599 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
COLGALT1-201ENST00000252599 TAF3Q5VWG9 929 aa16.93■□□□□ 0.3
COLGALT1-201ENST00000252599 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
COLGALT1-201ENST00000252599 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
COLGALT1-201ENST00000252599 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
COLGALT1-201ENST00000252599 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
COLGALT1-201ENST00000252599 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.91■□□□□ 0.3
COLGALT1-201ENST00000252599 ZNF644Q9H582 1327 aaPredicted RBP16.9■□□□□ 0.3
COLGALT1-201ENST00000252599 FBXO3Q9UK99 471 aa16.9■□□□□ 0.3
COLGALT1-201ENST00000252599 GPATCH11Q8N954 259 aa16.9■□□□□ 0.3
COLGALT1-201ENST00000252599 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.31e-8■■■□□ 18.5
COLGALT1-201ENST00000252599 TRIM6-TRIM34B2RNG4 842 aa16.89■□□□□ 0.29
COLGALT1-201ENST00000252599 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
COLGALT1-201ENST00000252599 UQCRHLA0A096LP55 91 aa16.89■□□□□ 0.29
COLGALT1-201ENST00000252599 UQCRHP07919 91 aa16.89■□□□□ 0.29
COLGALT1-201ENST00000252599 FAM43BQ6ZT52 329 aaPredicted RBP16.88■□□□□ 0.29
COLGALT1-201ENST00000252599 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
COLGALT1-201ENST00000252599 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
COLGALT1-201ENST00000252599 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
COLGALT1-201ENST00000252599 RRBP1Q9P2E9 1410 aaKnown RBP16.88■□□□□ 0.29
COLGALT1-201ENST00000252599 PSMD1Q99460 953 aa16.87■□□□□ 0.29
COLGALT1-201ENST00000252599 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
COLGALT1-201ENST00000252599 BECN1Q14457 450 aa16.87■□□□□ 0.29
COLGALT1-201ENST00000252599 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
COLGALT1-201ENST00000252599 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
COLGALT1-201ENST00000252599 PANK2Q9BZ23 570 aa16.86■□□□□ 0.29
COLGALT1-201ENST00000252599 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
COLGALT1-201ENST00000252599 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
COLGALT1-201ENST00000252599 KIF20AO95235 890 aa16.85■□□□□ 0.29
COLGALT1-201ENST00000252599 MPNDQ8N594 471 aa16.85■□□□□ 0.29
COLGALT1-201ENST00000252599 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.298e-8■■■■□ 26.4
COLGALT1-201ENST00000252599 CCER2I3L3R5 266 aa16.85■□□□□ 0.29
COLGALT1-201ENST00000252599 LETM1O95202 739 aaPredicted RBP16.85■□□□□ 0.29
COLGALT1-201ENST00000252599 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
COLGALT1-201ENST00000252599 LMOD3Q0VAK6 560 aa16.84■□□□□ 0.29
COLGALT1-201ENST00000252599 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
COLGALT1-201ENST00000252599 CENPJQ9HC77 1338 aaPredicted RBP16.83■□□□□ 0.29
COLGALT1-201ENST00000252599 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.29
COLGALT1-201ENST00000252599 TCERG1O14776 1098 aaKnown RBP16.82■□□□□ 0.28
COLGALT1-201ENST00000252599 AXDND1Q5T1B0 1012 aaPredicted RBP16.82■□□□□ 0.28
COLGALT1-201ENST00000252599 CFTRP13569 1480 aa16.82■□□□□ 0.28
COLGALT1-201ENST00000252599 DMTNQ08495 405 aa16.82■□□□□ 0.28
COLGALT1-201ENST00000252599 NGEFQ8N5V2 710 aa16.81■□□□□ 0.28
COLGALT1-201ENST00000252599 CCDC66A2RUB6 948 aa16.8■□□□□ 0.28
COLGALT1-201ENST00000252599 TICAM2Q86XR7 235 aa16.8■□□□□ 0.28
COLGALT1-201ENST00000252599 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
COLGALT1-201ENST00000252599 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.28
COLGALT1-201ENST00000252599 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
COLGALT1-201ENST00000252599 PKD2Q13563 968 aa16.77■□□□□ 0.28
COLGALT1-201ENST00000252599 CLSTN1O94985 981 aa16.77■□□□□ 0.27
COLGALT1-201ENST00000252599 GTPBP4Q9BZE4 634 aaKnown RBP16.77■□□□□ 0.27
COLGALT1-201ENST00000252599 RALBP1Q15311 655 aa16.77■□□□□ 0.27
COLGALT1-201ENST00000252599 ERICH4A6NGS2 130 aa16.76■□□□□ 0.27
COLGALT1-201ENST00000252599 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
COLGALT1-201ENST00000252599 XRCC6P12956 609 aaKnown RBP eCLIP16.75■□□□□ 0.272e-7■□□□□ 8
COLGALT1-201ENST00000252599 CCDC18Q5T9S5 1454 aa16.75■□□□□ 0.27
COLGALT1-201ENST00000252599 GOLIM4O00461 696 aa16.75■□□□□ 0.27
COLGALT1-201ENST00000252599 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
COLGALT1-201ENST00000252599 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
COLGALT1-201ENST00000252599 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
COLGALT1-201ENST00000252599 MRE11P49959 708 aa16.73■□□□□ 0.27
COLGALT1-201ENST00000252599 EP400NLQ6ZTU2 488 aa16.73■□□□□ 0.27
COLGALT1-201ENST00000252599 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
COLGALT1-201ENST00000252599 FMN1Q68DA7 1419 aa16.72■□□□□ 0.27
COLGALT1-201ENST00000252599 UTP14CQ5TAP6 766 aaKnown RBP16.72■□□□□ 0.27
COLGALT1-201ENST00000252599 TMX1Q9H3N1 280 aa16.72■□□□□ 0.27
COLGALT1-201ENST00000252599 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
COLGALT1-201ENST00000252599 GTF2A1P52655 376 aaPredicted RBP16.71■□□□□ 0.27
COLGALT1-201ENST00000252599 FGD6Q6ZV73 1430 aa16.71■□□□□ 0.26
COLGALT1-201ENST00000252599 LOC102724159A0A0B4J2E5 919 aa16.7■□□□□ 0.26
COLGALT1-201ENST00000252599 PWP2Q15269 919 aaKnown RBP16.7■□□□□ 0.26
COLGALT1-201ENST00000252599 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
COLGALT1-201ENST00000252599 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
COLGALT1-201ENST00000252599 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
COLGALT1-201ENST00000252599 ARID4AP29374 1257 aaPredicted RBP16.68■□□□□ 0.26
COLGALT1-201ENST00000252599 TIGD1Q96MW7 591 aa16.67■□□□□ 0.26
COLGALT1-201ENST00000252599 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
COLGALT1-201ENST00000252599 NBPF8Q3BBV2 869 aa16.66■□□□□ 0.26
COLGALT1-201ENST00000252599 TIAM1Q13009 1591 aa16.65■□□□□ 0.26
COLGALT1-201ENST00000252599 PIK3R5Q8WYR1 880 aa16.64■□□□□ 0.25
COLGALT1-201ENST00000252599 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
COLGALT1-201ENST00000252599 MAPKBP1O60336 1514 aa16.63■□□□□ 0.25
COLGALT1-201ENST00000252599 PHF14O94880 888 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms