RNA–Protein interactions for RNA: ENST00000249363.3

LRRC4-201, Transcript of leucine rich repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC4, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-201ENST00000249363 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.22
LRRC4-201ENST00000249363 ANKRD50Q9ULJ7 1429 aa13.7□□□□□ -0.22
LRRC4-201ENST00000249363 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
LRRC4-201ENST00000249363 PZPP20742 1482 aa13.7□□□□□ -0.22
LRRC4-201ENST00000249363 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
LRRC4-201ENST00000249363 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
LRRC4-201ENST00000249363 SPAG9O60271 1321 aaKnown RBP13.67□□□□□ -0.22
LRRC4-201ENST00000249363 PRDM15P57071 1507 aaPredicted RBP13.67□□□□□ -0.22
LRRC4-201ENST00000249363 ARHGEF40Q8TER5 1519 aa13.67□□□□□ -0.22
LRRC4-201ENST00000249363 MSH5O43196 834 aa13.65□□□□□ -0.22
LRRC4-201ENST00000249363 DHX29Q7Z478 1369 aaKnown RBP13.65□□□□□ -0.22
LRRC4-201ENST00000249363 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
LRRC4-201ENST00000249363 A2MP01023 1474 aa13.64□□□□□ -0.23
LRRC4-201ENST00000249363 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
LRRC4-201ENST00000249363 RAPGEF3O95398 923 aa13.64□□□□□ -0.23
LRRC4-201ENST00000249363 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
LRRC4-201ENST00000249363 AGLP35573 1532 aa13.62□□□□□ -0.23
LRRC4-201ENST00000249363 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
LRRC4-201ENST00000249363 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
LRRC4-201ENST00000249363 TET3O43151 1660 aa13.6□□□□□ -0.23
LRRC4-201ENST00000249363 E9PCH4 1651 aa13.59□□□□□ -0.23
LRRC4-201ENST00000249363 ATP10AO60312 1499 aa13.59□□□□□ -0.23
LRRC4-201ENST00000249363 CEP152O94986 1710 aa13.59□□□□□ -0.23
LRRC4-201ENST00000249363 ZC3H13Q5T200 1668 aaKnown RBP13.58□□□□□ -0.23
LRRC4-201ENST00000249363 MPHOSPH9Q99550 1183 aa13.55□□□□□ -0.24
LRRC4-201ENST00000249363 EFCAB6Q5THR3 1501 aa13.54□□□□□ -0.24
LRRC4-201ENST00000249363 ANKRD30BQ9BXX2 1392 aa13.54□□□□□ -0.24
LRRC4-201ENST00000249363 CAMSAP1Q5T5Y3 1602 aa13.53□□□□□ -0.24
LRRC4-201ENST00000249363 ABCC3O15438 1527 aa13.53□□□□□ -0.24
LRRC4-201ENST00000249363 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
LRRC4-201ENST00000249363 SPHKAPQ2M3C7 1700 aa13.53□□□□□ -0.24
LRRC4-201ENST00000249363 NUP155O75694 1391 aa13.52□□□□□ -0.24
LRRC4-201ENST00000249363 PLA2R1Q13018 1463 aa13.52□□□□□ -0.25
LRRC4-201ENST00000249363 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
LRRC4-201ENST00000249363 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
LRRC4-201ENST00000249363 PTPRTO14522 1441 aa13.49□□□□□ -0.25
LRRC4-201ENST00000249363 TRPM2O94759 1503 aa13.48□□□□□ -0.25
LRRC4-201ENST00000249363 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
LRRC4-201ENST00000249363 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
LRRC4-201ENST00000249363 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
LRRC4-201ENST00000249363 NEURL4Q96JN8 1562 aa13.47□□□□□ -0.25
LRRC4-201ENST00000249363 PIK3C2BO00750 1634 aa13.46□□□□□ -0.25
LRRC4-201ENST00000249363 CLTCQ00610 1675 aaKnown RBP13.46□□□□□ -0.25
LRRC4-201ENST00000249363 ARHGAP31Q2M1Z3 1444 aa13.46□□□□□ -0.25
LRRC4-201ENST00000249363 KIF3BO15066 747 aa13.46□□□□□ -0.26
LRRC4-201ENST00000249363 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
LRRC4-201ENST00000249363 ZEB1P37275 1124 aaPredicted RBP13.45□□□□□ -0.26
LRRC4-201ENST00000249363 CLTCL1P53675 1640 aa13.45□□□□□ -0.26
LRRC4-201ENST00000249363 PREX1Q8TCU6 1659 aa13.45□□□□□ -0.26
LRRC4-201ENST00000249363 PKD2Q13563 968 aa13.44□□□□□ -0.26
LRRC4-201ENST00000249363 SYNMO15061 1565 aa13.43□□□□□ -0.26
LRRC4-201ENST00000249363 NPATQ14207 1427 aa13.42□□□□□ -0.26
LRRC4-201ENST00000249363 KANK1Q14678 1352 aa13.41□□□□□ -0.26
LRRC4-201ENST00000249363 SIN3AQ96ST3 1273 aa13.41□□□□□ -0.26
LRRC4-201ENST00000249363 IFT172Q9UG01 1749 aa13.41□□□□□ -0.26
LRRC4-201ENST00000249363 NOS1P29475 1434 aa13.41□□□□□ -0.26
LRRC4-201ENST00000249363 ADAMTSL3P82987 1691 aa13.4□□□□□ -0.26
LRRC4-201ENST00000249363 FER1L4A9Z1Z3 1794 aa13.4□□□□□ -0.26
LRRC4-201ENST00000249363 TIMELESSQ9UNS1 1208 aa13.39□□□□□ -0.27
LRRC4-201ENST00000249363 SPATA31D1Q6ZQQ2 1576 aa13.39□□□□□ -0.27
LRRC4-201ENST00000249363 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
LRRC4-201ENST00000249363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
LRRC4-201ENST00000249363 KIF1BO60333 1816 aa13.38□□□□□ -0.27
LRRC4-201ENST00000249363 CFAP65Q6ZU64 1925 aaKnown RBP13.37□□□□□ -0.27
LRRC4-201ENST00000249363 SPATA31E1Q6ZUB1 1445 aa13.37□□□□□ -0.27
LRRC4-201ENST00000249363 C3P01024 1663 aa13.37□□□□□ -0.27
LRRC4-201ENST00000249363 UGGT1Q9NYU2 1555 aa13.36□□□□□ -0.27
LRRC4-201ENST00000249363 CNTLNQ9NXG0 1405 aa13.36□□□□□ -0.27
LRRC4-201ENST00000249363 ADGRB3O60242 1522 aa13.35□□□□□ -0.27
LRRC4-201ENST00000249363 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
LRRC4-201ENST00000249363 ERVK-7P63135 1459 aa13.34□□□□□ -0.27
LRRC4-201ENST00000249363 MYO5BQ9ULV0 1848 aa13.34□□□□□ -0.27
LRRC4-201ENST00000249363 GGT6Q6P531 493 aa13.34□□□□□ -0.27
LRRC4-201ENST00000249363 KDM5AP29375 1690 aaKnown RBP13.34□□□□□ -0.27
LRRC4-201ENST00000249363 TMEM131LA2VDJ0 1609 aa13.33□□□□□ -0.28
LRRC4-201ENST00000249363 PPLO60437 1756 aa13.32□□□□□ -0.28
LRRC4-201ENST00000249363 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
LRRC4-201ENST00000249363 CCDC144AA2RUR9 1427 aa13.32□□□□□ -0.28
LRRC4-201ENST00000249363 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
LRRC4-201ENST00000249363 UHRF1BP1Q6BDS2 1440 aa13.31□□□□□ -0.28
LRRC4-201ENST00000249363 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
LRRC4-201ENST00000249363 PPP1R15AO75807 674 aaPredicted RBP13.29□□□□□ -0.28
LRRC4-201ENST00000249363 TRPM1Q7Z4N2 1603 aa13.29□□□□□ -0.28
LRRC4-201ENST00000249363 RIMS1Q86UR5 1692 aaKnown RBP13.29□□□□□ -0.28
LRRC4-201ENST00000249363 NEUROD1Q13562 356 aa13.28□□□□□ -0.28
LRRC4-201ENST00000249363 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
LRRC4-201ENST00000249363 ZMYM3Q14202 1370 aa13.27□□□□□ -0.28
LRRC4-201ENST00000249363 NRXN1Q9ULB1 1477 aa13.27□□□□□ -0.28
LRRC4-201ENST00000249363 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
LRRC4-201ENST00000249363 KIAA1210Q9ULL0 1709 aa13.27□□□□□ -0.29
LRRC4-201ENST00000249363 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.29
LRRC4-201ENST00000249363 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
LRRC4-201ENST00000249363 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
LRRC4-201ENST00000249363 LAMC1P11047 1609 aa13.25□□□□□ -0.29
LRRC4-201ENST00000249363 MYOM2P54296 1465 aa13.25□□□□□ -0.29
LRRC4-201ENST00000249363 ZNF142P52746 1687 aaPredicted RBP13.24□□□□□ -0.29
LRRC4-201ENST00000249363 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
LRRC4-201ENST00000249363 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
LRRC4-201ENST00000249363 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
LRRC4-201ENST00000249363 RALGAPBQ86X10 1494 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms