RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 CCDC144AA2RUR9 1427 aa17.54■□□□□ 0.4
PEX1-201ENST00000248633 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
PEX1-201ENST00000248633 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
PEX1-201ENST00000248633 CCDC141Q6ZP82 1450 aa17.52■□□□□ 0.4
PEX1-201ENST00000248633 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.4
PEX1-201ENST00000248633 TCOF1Q13428 1488 aaKnown RBP17.52■□□□□ 0.39
PEX1-201ENST00000248633 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
PEX1-201ENST00000248633 CHD1O14646 1710 aa17.5■□□□□ 0.39
PEX1-201ENST00000248633 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
PEX1-201ENST00000248633 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
PEX1-201ENST00000248633 ZBED9Q6R2W3 1325 aa17.5■□□□□ 0.39
PEX1-201ENST00000248633 ROCK2O75116 1388 aaKnown RBP17.49■□□□□ 0.39
PEX1-201ENST00000248633 RCAN3Q9UKA8 241 aa17.49■□□□□ 0.39
PEX1-201ENST00000248633 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
PEX1-201ENST00000248633 ABCC2Q92887 1545 aa17.47■□□□□ 0.39
PEX1-201ENST00000248633 PLIN1O60240 522 aa17.47■□□□□ 0.39
PEX1-201ENST00000248633 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
PEX1-201ENST00000248633 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
PEX1-201ENST00000248633 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
PEX1-201ENST00000248633 RAPGEF3O95398 923 aa17.44■□□□□ 0.38
PEX1-201ENST00000248633 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
PEX1-201ENST00000248633 MAPKBP1O60336 1514 aa17.44■□□□□ 0.38
PEX1-201ENST00000248633 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
PEX1-201ENST00000248633 ABCA8O94911 1581 aa17.43■□□□□ 0.38
PEX1-201ENST00000248633 CD109Q6YHK3 1445 aa17.43■□□□□ 0.38
PEX1-201ENST00000248633 IL27Q8NEV9 243 aa17.42■□□□□ 0.38
PEX1-201ENST00000248633 ASXL2Q76L83 1435 aa17.42■□□□□ 0.38
PEX1-201ENST00000248633 PLCH2O75038 1416 aa17.41■□□□□ 0.38
PEX1-201ENST00000248633 PDE4AP27815 886 aa17.41■□□□□ 0.38
PEX1-201ENST00000248633 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
PEX1-201ENST00000248633 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
PEX1-201ENST00000248633 NBPF8Q3BBV2 869 aa17.4■□□□□ 0.38
PEX1-201ENST00000248633 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
PEX1-201ENST00000248633 ST20-MTHFSA0A0A6YYL1 179 aa17.39■□□□□ 0.37
PEX1-201ENST00000248633 FANCAO15360 1455 aa17.39■□□□□ 0.37
PEX1-201ENST00000248633 TMF1P82094 1093 aa17.39■□□□□ 0.37
PEX1-201ENST00000248633 KIF7Q2M1P5 1343 aa17.39■□□□□ 0.37
PEX1-201ENST00000248633 ADGRL1O94910 1474 aa17.39■□□□□ 0.37
PEX1-201ENST00000248633 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
PEX1-201ENST00000248633 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
PEX1-201ENST00000248633 WDR7Q9Y4E6 1490 aa17.38■□□□□ 0.37
PEX1-201ENST00000248633 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
PEX1-201ENST00000248633 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
PEX1-201ENST00000248633 CCDC7Q96M83 1385 aa17.37■□□□□ 0.37
PEX1-201ENST00000248633 USP47Q96K76 1375 aa17.37■□□□□ 0.37
PEX1-201ENST00000248633 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
PEX1-201ENST00000248633 SPRYD3Q8NCJ5 442 aa17.37■□□□□ 0.37
PEX1-201ENST00000248633 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
PEX1-201ENST00000248633 DNMT1P26358 1616 aaKnown RBP17.34■□□□□ 0.37
PEX1-201ENST00000248633 C11orf95C9JLR9 678 aaPredicted RBP17.34■□□□□ 0.37
PEX1-201ENST00000248633 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
PEX1-201ENST00000248633 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.37
PEX1-201ENST00000248633 SLKQ9H2G2 1235 aaPredicted RBP17.33■□□□□ 0.37
PEX1-201ENST00000248633 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.36
PEX1-201ENST00000248633 TRAPPC8Q9Y2L5 1435 aa17.31■□□□□ 0.36
PEX1-201ENST00000248633 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
PEX1-201ENST00000248633 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
PEX1-201ENST00000248633 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
PEX1-201ENST00000248633 STK26Q9P289 416 aa17.3■□□□□ 0.36
PEX1-201ENST00000248633 BECN1Q14457 450 aa17.29■□□□□ 0.36
PEX1-201ENST00000248633 POGKQ9P215 609 aa17.29■□□□□ 0.36
PEX1-201ENST00000248633 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
PEX1-201ENST00000248633 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
PEX1-201ENST00000248633 NAP1L5Q96NT1 182 aaPredicted RBP17.27■□□□□ 0.35
PEX1-201ENST00000248633 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
PEX1-201ENST00000248633 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
PEX1-201ENST00000248633 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
PEX1-201ENST00000248633 SHANK2Q9UPX8 1470 aa17.26■□□□□ 0.35
PEX1-201ENST00000248633 GZF1Q9H116 711 aaPredicted RBP17.25■□□□□ 0.35
PEX1-201ENST00000248633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.25■□□□□ 0.35
PEX1-201ENST00000248633 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
PEX1-201ENST00000248633 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
PEX1-201ENST00000248633 CDCA7LQ96GN5 454 aa17.24■□□□□ 0.35
PEX1-201ENST00000248633 UHRF1BP1LA0JNW5 1464 aa17.24■□□□□ 0.35
PEX1-201ENST00000248633 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
PEX1-201ENST00000248633 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
PEX1-201ENST00000248633 RALBP1Q15311 655 aa17.23■□□□□ 0.35
PEX1-201ENST00000248633 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
PEX1-201ENST00000248633 NLRP13Q86W25 1043 aa17.23■□□□□ 0.35
PEX1-201ENST00000248633 GSE1Q14687 1217 aa17.22■□□□□ 0.35
PEX1-201ENST00000248633 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
PEX1-201ENST00000248633 GLIPR1L2Q4G1C9 344 aa17.22■□□□□ 0.35
PEX1-201ENST00000248633 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
PEX1-201ENST00000248633 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
PEX1-201ENST00000248633 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
PEX1-201ENST00000248633 MYBBP1AQ9BQG0 1328 aaKnown RBP17.2■□□□□ 0.34
PEX1-201ENST00000248633 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
PEX1-201ENST00000248633 DENND4BO75064 1496 aaPredicted RBP17.19■□□□□ 0.34
PEX1-201ENST00000248633 HDGFP51858 240 aaKnown RBP17.19■□□□□ 0.34
PEX1-201ENST00000248633 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
PEX1-201ENST00000248633 DUOX2Q9NRD8 1548 aa17.19■□□□□ 0.34
PEX1-201ENST00000248633 PZPP20742 1482 aa17.19■□□□□ 0.34
PEX1-201ENST00000248633 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
PEX1-201ENST00000248633 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
PEX1-201ENST00000248633 TTC37Q6PGP7 1564 aa17.18■□□□□ 0.34
PEX1-201ENST00000248633 KDM6BO15054 1643 aa17.18■□□□□ 0.34
PEX1-201ENST00000248633 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
PEX1-201ENST00000248633 CLASP1Q7Z460 1538 aa17.17■□□□□ 0.34
PEX1-201ENST00000248633 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
PEX1-201ENST00000248633 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms