RNA–Protein interactions for RNA: ENST00000247461.8

CANX-201, Transcript of calnexin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CANX, Length 4,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CANX-201ENST00000247461 BECN1Q14457 450 aa20.36■□□□□ 0.85
CANX-201ENST00000247461 EIF3AQ14152 1382 aaKnown RBP20.35■□□□□ 0.85
CANX-201ENST00000247461 PLB1Q6P1J6 1458 aa20.34■□□□□ 0.85
CANX-201ENST00000247461 GOLGA2Q08379 1002 aa20.34■□□□□ 0.85
CANX-201ENST00000247461 NGDNQ8NEJ9 315 aaKnown RBP20.33■□□□□ 0.85
CANX-201ENST00000247461 TMEM132EQ6IEE7 984 aa20.33■□□□□ 0.84
CANX-201ENST00000247461 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.84
CANX-201ENST00000247461 SCAPERQ9BY12 1400 aa20.33■□□□□ 0.84
CANX-201ENST00000247461 TERF2IPQ9NYB0 399 aa20.33■□□□□ 0.84
CANX-201ENST00000247461 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
CANX-201ENST00000247461 NAIPQ13075 1403 aa20.29■□□□□ 0.84
CANX-201ENST00000247461 EPRSP07814 1512 aaKnown RBP20.29■□□□□ 0.84
CANX-201ENST00000247461 PDE3BQ13370 1112 aa20.29■□□□□ 0.84
CANX-201ENST00000247461 MIA2Q96PC5 1412 aa20.28■□□□□ 0.84
CANX-201ENST00000247461 PLIN1O60240 522 aa20.28■□□□□ 0.84
CANX-201ENST00000247461 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
CANX-201ENST00000247461 EHBP1L1Q8N3D4 1523 aa20.27■□□□□ 0.84
CANX-201ENST00000247461 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
CANX-201ENST00000247461 MS4A1P11836 297 aa20.27■□□□□ 0.84
CANX-201ENST00000247461 CFAP70Q5T0N1 1121 aa20.26■□□□□ 0.83
CANX-201ENST00000247461 CLUAP1Q96AJ1 413 aa20.26■□□□□ 0.83
CANX-201ENST00000247461 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
CANX-201ENST00000247461 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
CANX-201ENST00000247461 IQGAP2Q13576 1575 aa20.26■□□□□ 0.83
CANX-201ENST00000247461 ANP32BQ92688 251 aaKnown RBP20.26■□□□□ 0.83
CANX-201ENST00000247461 C9orf84Q5VXU9 1444 aa20.26■□□□□ 0.83
CANX-201ENST00000247461 CNTLNQ9NXG0 1405 aa20.25■□□□□ 0.83
CANX-201ENST00000247461 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
CANX-201ENST00000247461 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
CANX-201ENST00000247461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.22■□□□□ 0.831e-26■■□□□ 13.4
CANX-201ENST00000247461 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
CANX-201ENST00000247461 APAF1O14727 1248 aa20.21■□□□□ 0.83
CANX-201ENST00000247461 EXOC6Q8TAG9 804 aa20.21■□□□□ 0.83
CANX-201ENST00000247461 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
CANX-201ENST00000247461 CSB-PGBD3P0DP91 1061 aa20.2■□□□□ 0.82
CANX-201ENST00000247461 CCDC184Q52MB2 194 aa20.2■□□□□ 0.82
CANX-201ENST00000247461 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
CANX-201ENST00000247461 DAPK1P53355 1430 aa20.19■□□□□ 0.82
CANX-201ENST00000247461 EVC2Q86UK5 1308 aa20.19■□□□□ 0.82
CANX-201ENST00000247461 EIF5BO60841 1220 aaKnown RBP20.19■□□□□ 0.82
CANX-201ENST00000247461 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
CANX-201ENST00000247461 BCL2L13Q9BXK5 485 aa20.17■□□□□ 0.82
CANX-201ENST00000247461 KIAA1107Q9UPP5 1409 aa20.17■□□□□ 0.82
CANX-201ENST00000247461 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
CANX-201ENST00000247461 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
CANX-201ENST00000247461 AMPHP49418 695 aa20.16■□□□□ 0.82
CANX-201ENST00000247461 RRP1P56182 461 aaKnown RBP20.16■□□□□ 0.82
CANX-201ENST00000247461 CENPJQ9HC77 1338 aaPredicted RBP20.16■□□□□ 0.82
CANX-201ENST00000247461 ITPRIPQ8IWB1 547 aa20.15■□□□□ 0.82
CANX-201ENST00000247461 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
CANX-201ENST00000247461 CHMP4BQ9H444 224 aaKnown RBP20.14■□□□□ 0.82
CANX-201ENST00000247461 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
CANX-201ENST00000247461 APBB1O00213 710 aa20.12■□□□□ 0.81
CANX-201ENST00000247461 CABP2Q9NPB3 220 aa20.12■□□□□ 0.81
CANX-201ENST00000247461 SUPT6HQ7KZ85 1726 aaKnown RBP20.12■□□□□ 0.81
CANX-201ENST00000247461 MAP3K1Q13233 1512 aa20.11■□□□□ 0.81
CANX-201ENST00000247461 CUL7Q14999 1698 aa20.11■□□□□ 0.81
CANX-201ENST00000247461 C11orf95C9JLR9 678 aaPredicted RBP20.1■□□□□ 0.81
CANX-201ENST00000247461 CRBNQ96SW2 442 aa20.1■□□□□ 0.81
CANX-201ENST00000247461 CGNL1Q0VF96 1302 aa20.1■□□□□ 0.81
CANX-201ENST00000247461 SPRYD3Q8NCJ5 442 aa20.1■□□□□ 0.81
CANX-201ENST00000247461 ELL2O00472 640 aaPredicted RBP20.1■□□□□ 0.81
CANX-201ENST00000247461 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.81
CANX-201ENST00000247461 GGNBP2Q9H3C7 697 aa20.07■□□□□ 0.8
CANX-201ENST00000247461 CASC1Q6TDU7 716 aa20.07■□□□□ 0.8
CANX-201ENST00000247461 ZNF330Q9Y3S2 320 aaPredicted RBP20.07■□□□□ 0.8
CANX-201ENST00000247461 COG3Q96JB2 828 aa20.07■□□□□ 0.8
CANX-201ENST00000247461 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
CANX-201ENST00000247461 CDCA7LQ96GN5 454 aa20.06■□□□□ 0.8
CANX-201ENST00000247461 ABCC5O15440 1437 aa20.06■□□□□ 0.8
CANX-201ENST00000247461 NCLP19338 710 aaKnown RBP20.05■□□□□ 0.8
CANX-201ENST00000247461 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
CANX-201ENST00000247461 TXNDC2Q86VQ3 553 aa20.05■□□□□ 0.8
CANX-201ENST00000247461 STAC3Q96MF2 364 aa20.05■□□□□ 0.8
CANX-201ENST00000247461 ANKRD30BQ9BXX2 1392 aa20.04■□□□□ 0.8
CANX-201ENST00000247461 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
CANX-201ENST00000247461 E9PSI1 815 aa20.04■□□□□ 0.8
CANX-201ENST00000247461 CALD1Q05682 793 aaKnown RBP20.04■□□□□ 0.8
CANX-201ENST00000247461 COG6Q9Y2V7 657 aa20.04■□□□□ 0.8
CANX-201ENST00000247461 GOLGA6L22H0YM25 854 aa20.03■□□□□ 0.8
CANX-201ENST00000247461 HSP90AB1P08238 724 aaKnown RBP20.02■□□□□ 0.8
CANX-201ENST00000247461 TPRNQ4KMQ1 711 aa20.02■□□□□ 0.8
CANX-201ENST00000247461 IPO9Q96P70 1041 aaKnown RBP20.02■□□□□ 0.8
CANX-201ENST00000247461 CD109Q6YHK3 1445 aa20.01■□□□□ 0.79
CANX-201ENST00000247461 NUTM2GQ5VZR2 741 aa20.01■□□□□ 0.79
CANX-201ENST00000247461 PLEKHH2Q8IVE3 1493 aa20.01■□□□□ 0.79
CANX-201ENST00000247461 NPHP1O15259 732 aa20.01■□□□□ 0.79
CANX-201ENST00000247461 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.01■□□□□ 0.79
CANX-201ENST00000247461 PNISRQ8TF01 805 aaKnown RBP20.01■□□□□ 0.79
CANX-201ENST00000247461 SLC12A5Q9H2X9 1139 aa20.01■□□□□ 0.79
CANX-201ENST00000247461 BRD4O60885 1362 aaPredicted RBP20.01■□□□□ 0.79
CANX-201ENST00000247461 PMFBP1Q8TBY8 1022 aa20■□□□□ 0.79
CANX-201ENST00000247461 SLC26A8Q96RN1 970 aa20■□□□□ 0.79
CANX-201ENST00000247461 SLKQ9H2G2 1235 aaPredicted RBP20■□□□□ 0.79
CANX-201ENST00000247461 CCDC9Q9Y3X0 531 aaKnown RBP20■□□□□ 0.79
CANX-201ENST00000247461 PTPRKQ15262 1439 aa20■□□□□ 0.79
CANX-201ENST00000247461 PDE4AP27815 886 aa20■□□□□ 0.79
CANX-201ENST00000247461 PRAM1Q96QH2 718 aa19.99■□□□□ 0.79
CANX-201ENST00000247461 PTPN23Q9H3S7 1636 aa19.99■□□□□ 0.79
CANX-201ENST00000247461 DEKP35659 375 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms