RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 MIER1Q8N108 512 aa19.61■□□□□ 0.73
SNRNP27-201ENST00000244227 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
SNRNP27-201ENST00000244227 DEPDC5O75140 1603 aa19.6■□□□□ 0.73
SNRNP27-201ENST00000244227 MLH3Q9UHC1 1453 aa19.58■□□□□ 0.73
SNRNP27-201ENST00000244227 MYT1LQ9UL68 1186 aa19.58■□□□□ 0.72
SNRNP27-201ENST00000244227 EIF2AK4Q9P2K8 1649 aaKnown RBP19.56■□□□□ 0.72
SNRNP27-201ENST00000244227 DIP2BQ9P265 1576 aa19.56■□□□□ 0.72
SNRNP27-201ENST00000244227 ATP10AO60312 1499 aa19.56■□□□□ 0.72
SNRNP27-201ENST00000244227 VWDEQ8N2E2 1590 aa19.55■□□□□ 0.72
SNRNP27-201ENST00000244227 KIF3BO15066 747 aa19.54■□□□□ 0.72
SNRNP27-201ENST00000244227 FAM69CQ0P6D2 419 aa19.53■□□□□ 0.72
SNRNP27-201ENST00000244227 MROH1Q8NDA8 1641 aa19.53■□□□□ 0.72
SNRNP27-201ENST00000244227 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
SNRNP27-201ENST00000244227 CCDC144AA2RUR9 1427 aa19.53■□□□□ 0.72
SNRNP27-201ENST00000244227 RAPGEF3O95398 923 aa19.53■□□□□ 0.72
SNRNP27-201ENST00000244227 A2MP01023 1474 aa19.52■□□□□ 0.72
SNRNP27-201ENST00000244227 HSPA5P11021 654 aaKnown RBP19.52■□□□□ 0.72
SNRNP27-201ENST00000244227 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.71
SNRNP27-201ENST00000244227 PRDM15P57071 1507 aaPredicted RBP19.51■□□□□ 0.71
SNRNP27-201ENST00000244227 FRMPD1Q5SYB0 1578 aa19.51■□□□□ 0.71
SNRNP27-201ENST00000244227 E9PCH4 1651 aa19.5■□□□□ 0.71
SNRNP27-201ENST00000244227 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
SNRNP27-201ENST00000244227 RICTORQ6R327 1708 aa19.48■□□□□ 0.71
SNRNP27-201ENST00000244227 ABCA6Q8N139 1617 aa19.48■□□□□ 0.71
SNRNP27-201ENST00000244227 DDX10Q13206 875 aaKnown RBP19.48■□□□□ 0.71
SNRNP27-201ENST00000244227 TET3O43151 1660 aa19.47■□□□□ 0.71
SNRNP27-201ENST00000244227 KANK1Q14678 1352 aa19.47■□□□□ 0.71
SNRNP27-201ENST00000244227 PTPRTO14522 1441 aa19.47■□□□□ 0.71
SNRNP27-201ENST00000244227 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
SNRNP27-201ENST00000244227 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
SNRNP27-201ENST00000244227 RNF17Q9BXT8 1623 aaKnown RBP19.45■□□□□ 0.7
SNRNP27-201ENST00000244227 DCAF11Q8TEB1 546 aa19.44■□□□□ 0.7
SNRNP27-201ENST00000244227 DIP2CQ9Y2E4 1556 aa19.43■□□□□ 0.7
SNRNP27-201ENST00000244227 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
SNRNP27-201ENST00000244227 TRPM2O94759 1503 aa19.43■□□□□ 0.7
SNRNP27-201ENST00000244227 BCORL1Q5H9F3 1711 aa19.43■□□□□ 0.7
SNRNP27-201ENST00000244227 KDM2AQ9Y2K7 1162 aa19.42■□□□□ 0.7
SNRNP27-201ENST00000244227 LMTK2Q8IWU2 1503 aa19.42■□□□□ 0.7
SNRNP27-201ENST00000244227 RALGAPBQ86X10 1494 aa19.42■□□□□ 0.7
SNRNP27-201ENST00000244227 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
SNRNP27-201ENST00000244227 YEATS2Q9ULM3 1422 aa19.4■□□□□ 0.7
SNRNP27-201ENST00000244227 SPHKAPQ2M3C7 1700 aa19.4■□□□□ 0.7
SNRNP27-201ENST00000244227 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.7
SNRNP27-201ENST00000244227 EFCAB6Q5THR3 1501 aa19.39■□□□□ 0.69
SNRNP27-201ENST00000244227 TSPOAP1O95153 1857 aa19.38■□□□□ 0.69
SNRNP27-201ENST00000244227 PRAG1Q86YV5 1406 aa19.38■□□□□ 0.69
SNRNP27-201ENST00000244227 ZMYM4Q5VZL5 1548 aa19.37■□□□□ 0.69
SNRNP27-201ENST00000244227 C11orf95C9JLR9 678 aaPredicted RBP19.37■□□□□ 0.69
SNRNP27-201ENST00000244227 KIF13AQ9H1H9 1805 aa19.36■□□□□ 0.69
SNRNP27-201ENST00000244227 CLTCL1P53675 1640 aa19.36■□□□□ 0.69
SNRNP27-201ENST00000244227 GGT6Q6P531 493 aa19.35■□□□□ 0.69
SNRNP27-201ENST00000244227 CEP152O94986 1710 aa19.35■□□□□ 0.69
SNRNP27-201ENST00000244227 USP47Q96K76 1375 aa19.34■□□□□ 0.69
SNRNP27-201ENST00000244227 CCDC7Q96M83 1385 aa19.32■□□□□ 0.68
SNRNP27-201ENST00000244227 CARD11Q9BXL7 1154 aa19.32■□□□□ 0.68
SNRNP27-201ENST00000244227 TRPM1Q7Z4N2 1603 aa19.32■□□□□ 0.68
SNRNP27-201ENST00000244227 ABCC3O15438 1527 aa19.32■□□□□ 0.68
SNRNP27-201ENST00000244227 NPATQ14207 1427 aa19.3■□□□□ 0.68
SNRNP27-201ENST00000244227 NEURL4Q96JN8 1562 aa19.29■□□□□ 0.68
SNRNP27-201ENST00000244227 UGGT1Q9NYU2 1555 aa19.29■□□□□ 0.68
SNRNP27-201ENST00000244227 COL17A1Q9UMD9 1497 aaPredicted RBP19.29■□□□□ 0.68
SNRNP27-201ENST00000244227 WASHC2CQ9Y4E1 1318 aa19.29■□□□□ 0.68
SNRNP27-201ENST00000244227 GPRASP1Q5JY77 1395 aa19.29■□□□□ 0.68
SNRNP27-201ENST00000244227 ROCK2O75116 1388 aaKnown RBP19.28■□□□□ 0.68
SNRNP27-201ENST00000244227 NBPF1Q3BBV0 1214 aa19.28■□□□□ 0.68
SNRNP27-201ENST00000244227 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.68
SNRNP27-201ENST00000244227 CAMSAP1Q5T5Y3 1602 aa19.25■□□□□ 0.67
SNRNP27-201ENST00000244227 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
SNRNP27-201ENST00000244227 STAC3Q96MF2 364 aa19.24■□□□□ 0.67
SNRNP27-201ENST00000244227 REREQ9P2R6 1566 aa19.24■□□□□ 0.67
SNRNP27-201ENST00000244227 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
SNRNP27-201ENST00000244227 MADDQ8WXG6 1647 aa19.23■□□□□ 0.67
SNRNP27-201ENST00000244227 LAMC1P11047 1609 aa19.22■□□□□ 0.67
SNRNP27-201ENST00000244227 NOS1P29475 1434 aa19.22■□□□□ 0.67
SNRNP27-201ENST00000244227 ARHGAP31Q2M1Z3 1444 aa19.22■□□□□ 0.67
SNRNP27-201ENST00000244227 CNTLNQ9NXG0 1405 aa19.22■□□□□ 0.67
SNRNP27-201ENST00000244227 ST20-MTHFSA0A0A6YYL1 179 aa19.22■□□□□ 0.67
SNRNP27-201ENST00000244227 ANP32CO43423 234 aa19.21■□□□□ 0.67
SNRNP27-201ENST00000244227 ZC3H13Q5T200 1668 aaKnown RBP19.21■□□□□ 0.67
SNRNP27-201ENST00000244227 AGLP35573 1532 aa19.21■□□□□ 0.66
SNRNP27-201ENST00000244227 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
SNRNP27-201ENST00000244227 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
SNRNP27-201ENST00000244227 KIF1BO60333 1816 aa19.19■□□□□ 0.66
SNRNP27-201ENST00000244227 ADGRB3O60242 1522 aa19.18■□□□□ 0.66
SNRNP27-201ENST00000244227 MROH2AA6NES4 1674 aa19.18■□□□□ 0.66
SNRNP27-201ENST00000244227 CENPBP07199 599 aaPredicted RBP19.18■□□□□ 0.66
SNRNP27-201ENST00000244227 CCER2I3L3R5 266 aa19.16■□□□□ 0.66
SNRNP27-201ENST00000244227 MYOM2P54296 1465 aa19.16■□□□□ 0.66
SNRNP27-201ENST00000244227 CFAP65Q6ZU64 1925 aaKnown RBP19.16■□□□□ 0.66
SNRNP27-201ENST00000244227 SYNMO15061 1565 aa19.16■□□□□ 0.66
SNRNP27-201ENST00000244227 IFT172Q9UG01 1749 aa19.15■□□□□ 0.66
SNRNP27-201ENST00000244227 ARHGEF40Q8TER5 1519 aa19.15■□□□□ 0.66
SNRNP27-201ENST00000244227 PIK3C2BO00750 1634 aa19.14■□□□□ 0.65
SNRNP27-201ENST00000244227 ADGRF5Q8IZF2 1346 aa19.13■□□□□ 0.65
SNRNP27-201ENST00000244227 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
SNRNP27-201ENST00000244227 NRXN1Q9ULB1 1477 aa19.13■□□□□ 0.65
SNRNP27-201ENST00000244227 TESK2Q96S53 571 aa19.11■□□□□ 0.65
SNRNP27-201ENST00000244227 KIAA1210Q9ULL0 1709 aa19.1■□□□□ 0.65
SNRNP27-201ENST00000244227 CHGAP10645 457 aaKnown RBP19.1■□□□□ 0.65
SNRNP27-201ENST00000244227 IQGAP1P46940 1657 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms