RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
PDE1B-201ENST00000243052 HNRNPMP52272 730 aaKnown RBP eCLIP21■□□□□ 0.95
PDE1B-201ENST00000243052 CC2D1BQ5T0F9 858 aaKnown RBP21■□□□□ 0.95
PDE1B-201ENST00000243052 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
PDE1B-201ENST00000243052 IQGAP2Q13576 1575 aa21■□□□□ 0.95
PDE1B-201ENST00000243052 ABCA5Q8WWZ7 1642 aa20.99■□□□□ 0.95
PDE1B-201ENST00000243052 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
PDE1B-201ENST00000243052 TEX14Q8IWB6 1497 aa20.93■□□□□ 0.94
PDE1B-201ENST00000243052 ARHGEF11O15085 1522 aa20.93■□□□□ 0.94
PDE1B-201ENST00000243052 ANKRD30AQ9BXX3 1397 aa20.93■□□□□ 0.94
PDE1B-201ENST00000243052 C20orf194Q5TEA3 1177 aa20.92■□□□□ 0.94
PDE1B-201ENST00000243052 FAM161AQ3B820 660 aa20.92■□□□□ 0.94
PDE1B-201ENST00000243052 L1TD1Q5T7N2 865 aaKnown RBP20.92■□□□□ 0.94
PDE1B-201ENST00000243052 ARID3AQ99856 593 aa20.92■□□□□ 0.94
PDE1B-201ENST00000243052 ROCK1Q13464 1354 aa20.92■□□□□ 0.94
PDE1B-201ENST00000243052 PANK2Q9BZ23 570 aa20.9■□□□□ 0.94
PDE1B-201ENST00000243052 DHX29Q7Z478 1369 aaKnown RBP20.9■□□□□ 0.94
PDE1B-201ENST00000243052 SPATA31E1Q6ZUB1 1445 aa20.89■□□□□ 0.94
PDE1B-201ENST00000243052 ROCK2O75116 1388 aaKnown RBP20.89■□□□□ 0.93
PDE1B-201ENST00000243052 GCC2Q8IWJ2 1684 aa20.89■□□□□ 0.93
PDE1B-201ENST00000243052 KIAA1107Q9UPP5 1409 aa20.88■□□□□ 0.93
PDE1B-201ENST00000243052 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
PDE1B-201ENST00000243052 ANKRD50Q9ULJ7 1429 aa20.88■□□□□ 0.93
PDE1B-201ENST00000243052 WDR62O43379 1518 aa20.88■□□□□ 0.93
PDE1B-201ENST00000243052 JPH4Q96JJ6 628 aa20.88■□□□□ 0.93
PDE1B-201ENST00000243052 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
PDE1B-201ENST00000243052 GOLGA6L3A6NEY3 463 aa20.86■□□□□ 0.93
PDE1B-201ENST00000243052 NBPF1Q3BBV0 1214 aa20.86■□□□□ 0.93
PDE1B-201ENST00000243052 RRP9O43818 475 aaKnown RBP20.85■□□□□ 0.93
PDE1B-201ENST00000243052 KIF21AQ7Z4S6 1674 aa20.85■□□□□ 0.93
PDE1B-201ENST00000243052 CAMSAP2Q08AD1 1489 aa20.85■□□□□ 0.93
PDE1B-201ENST00000243052 PZPP20742 1482 aa20.84■□□□□ 0.93
PDE1B-201ENST00000243052 MYBBP1AQ9BQG0 1328 aaKnown RBP20.84■□□□□ 0.93
PDE1B-201ENST00000243052 KIF15Q9NS87 1388 aa20.84■□□□□ 0.93
PDE1B-201ENST00000243052 TROQ12816 1431 aaPredicted RBP20.82■□□□□ 0.92
PDE1B-201ENST00000243052 C8orf34Q49A92 452 aa20.81■□□□□ 0.92
PDE1B-201ENST00000243052 XRCC6P12956 609 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDE1B-201ENST00000243052 RALBP1Q15311 655 aa20.79■□□□□ 0.92
PDE1B-201ENST00000243052 BECN1Q14457 450 aa20.79■□□□□ 0.92
PDE1B-201ENST00000243052 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
PDE1B-201ENST00000243052 TRIM44Q96DX7 344 aaPredicted RBP20.78■□□□□ 0.92
PDE1B-201ENST00000243052 NLRP13Q86W25 1043 aa20.77■□□□□ 0.92
PDE1B-201ENST00000243052 KIAA0586Q9BVV6 1533 aa20.77■□□□□ 0.92
PDE1B-201ENST00000243052 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
PDE1B-201ENST00000243052 GPATCH8Q9UKJ3 1502 aaKnown RBP20.76■□□□□ 0.91
PDE1B-201ENST00000243052 DISP1Q96F81 1524 aa20.76■□□□□ 0.91
PDE1B-201ENST00000243052 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
PDE1B-201ENST00000243052 CENPQQ7L2Z9 268 aaPredicted RBP20.75■□□□□ 0.91
PDE1B-201ENST00000243052 PANK3Q9H999 370 aa20.75■□□□□ 0.91
PDE1B-201ENST00000243052 DNMT1P26358 1616 aaKnown RBP20.75■□□□□ 0.91
PDE1B-201ENST00000243052 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
PDE1B-201ENST00000243052 RBM10P98175 930 aaKnown RBP20.72■□□□□ 0.91
PDE1B-201ENST00000243052 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
PDE1B-201ENST00000243052 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
PDE1B-201ENST00000243052 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
PDE1B-201ENST00000243052 CLCN1P35523 988 aa20.71■□□□□ 0.91
PDE1B-201ENST00000243052 CARMIL2Q6F5E8 1435 aa20.7■□□□□ 0.9
PDE1B-201ENST00000243052 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
PDE1B-201ENST00000243052 BCORL1Q5H9F3 1711 aa20.7■□□□□ 0.9
PDE1B-201ENST00000243052 BRD4O60885 1362 aaPredicted RBP20.69■□□□□ 0.9
PDE1B-201ENST00000243052 SEC24BO95487 1268 aa20.69■□□□□ 0.9
PDE1B-201ENST00000243052 KIAA0556O60303 1618 aa20.69■□□□□ 0.9
PDE1B-201ENST00000243052 PDE3BQ13370 1112 aa20.68■□□□□ 0.9
PDE1B-201ENST00000243052 RAPGEF6Q8TEU7 1601 aa20.68■□□□□ 0.9
PDE1B-201ENST00000243052 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
PDE1B-201ENST00000243052 WDR43Q15061 677 aaKnown RBP eCLIP20.68■□□□□ 0.9
PDE1B-201ENST00000243052 CCDC144AA2RUR9 1427 aa20.66■□□□□ 0.9
PDE1B-201ENST00000243052 UPF2Q9HAU5 1272 aaKnown RBP20.66■□□□□ 0.9
PDE1B-201ENST00000243052 KIF14Q15058 1648 aa20.66■□□□□ 0.9
PDE1B-201ENST00000243052 ESPNB1AK53 854 aa20.65■□□□□ 0.9
PDE1B-201ENST00000243052 CANXP27824 592 aaKnown RBP20.65■□□□□ 0.9
PDE1B-201ENST00000243052 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
PDE1B-201ENST00000243052 TMF1P82094 1093 aa20.63■□□□□ 0.89
PDE1B-201ENST00000243052 KNSTRNQ9Y448 316 aa20.63■□□□□ 0.89
PDE1B-201ENST00000243052 CCDC146Q8IYE0 955 aa20.63■□□□□ 0.89
PDE1B-201ENST00000243052 FAM13BQ9NYF5 915 aa20.62■□□□□ 0.89
PDE1B-201ENST00000243052 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
PDE1B-201ENST00000243052 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.61■□□□□ 0.89
PDE1B-201ENST00000243052 RALGAPBQ86X10 1494 aa20.59■□□□□ 0.89
PDE1B-201ENST00000243052 TRAK2O60296 914 aa20.59■□□□□ 0.89
PDE1B-201ENST00000243052 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
PDE1B-201ENST00000243052 ZBTB7CA1YPR0 619 aa20.59■□□□□ 0.89
PDE1B-201ENST00000243052 MBD5Q9P267 1494 aa20.58■□□□□ 0.88
PDE1B-201ENST00000243052 KIAA1211Q6ZU35 1233 aa20.58■□□□□ 0.88
PDE1B-201ENST00000243052 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
PDE1B-201ENST00000243052 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
PDE1B-201ENST00000243052 LRPPRCP42704 1394 aaKnown RBP20.56■□□□□ 0.88
PDE1B-201ENST00000243052 KDM5CP41229 1560 aa20.56■□□□□ 0.88
PDE1B-201ENST00000243052 MCM4P33991 863 aa20.56■□□□□ 0.88
PDE1B-201ENST00000243052 ERBB4Q15303 1308 aa20.55■□□□□ 0.88
PDE1B-201ENST00000243052 GRPEL1Q9HAV7 217 aa20.55■□□□□ 0.88
PDE1B-201ENST00000243052 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
PDE1B-201ENST00000243052 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
PDE1B-201ENST00000243052 MRE11P49959 708 aa20.54■□□□□ 0.88
PDE1B-201ENST00000243052 NEUROD2Q15784 382 aa20.54■□□□□ 0.88
PDE1B-201ENST00000243052 TNNT2P45379 298 aaPredicted RBP20.53■□□□□ 0.88
PDE1B-201ENST00000243052 PTPRGP23470 1445 aa20.52■□□□□ 0.88
PDE1B-201ENST00000243052 TBC1D2Q9BYX2 928 aa20.52■□□□□ 0.88
PDE1B-201ENST00000243052 PDCL3Q9H2J4 239 aa20.52■□□□□ 0.88
PDE1B-201ENST00000243052 PRDM10Q9NQV6 1147 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms