RNA–Protein interactions for RNA: ENST00000241274.3

SLITRK3-201, Transcript of SLIT and NTRK like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK3, Length 4,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLITRK3-201ENST00000241274 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
SLITRK3-201ENST00000241274 GSE1Q14687 1217 aa16.62■□□□□ 0.25
SLITRK3-201ENST00000241274 ABCC2Q92887 1545 aa16.61■□□□□ 0.25
SLITRK3-201ENST00000241274 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
SLITRK3-201ENST00000241274 TCERG1O14776 1098 aaKnown RBP16.61■□□□□ 0.25
SLITRK3-201ENST00000241274 RGS3P49796 1198 aa16.61■□□□□ 0.25
SLITRK3-201ENST00000241274 RCAN3Q9UKA8 241 aa16.61■□□□□ 0.25
SLITRK3-201ENST00000241274 ABCC10Q5T3U5 1492 aa16.6■□□□□ 0.25
SLITRK3-201ENST00000241274 GCC2Q8IWJ2 1684 aa16.6■□□□□ 0.25
SLITRK3-201ENST00000241274 NFKBIBQ15653 356 aa16.59■□□□□ 0.25
SLITRK3-201ENST00000241274 RRP1P56182 461 aaKnown RBP16.58■□□□□ 0.24
SLITRK3-201ENST00000241274 ERCC6L2Q5T890 1561 aa16.58■□□□□ 0.24
SLITRK3-201ENST00000241274 ADCY10Q96PN6 1610 aa16.57■□□□□ 0.24
SLITRK3-201ENST00000241274 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
SLITRK3-201ENST00000241274 PLEKHH2Q8IVE3 1493 aa16.56■□□□□ 0.24
SLITRK3-201ENST00000241274 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
SLITRK3-201ENST00000241274 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
SLITRK3-201ENST00000241274 ANKRD30BQ9BXX2 1392 aa16.55■□□□□ 0.24
SLITRK3-201ENST00000241274 USP35Q9P2H5 1018 aa16.54■□□□□ 0.24
SLITRK3-201ENST00000241274 KDM6BO15054 1643 aa16.54■□□□□ 0.24
SLITRK3-201ENST00000241274 SPAG9O60271 1321 aaKnown RBP16.54■□□□□ 0.24
SLITRK3-201ENST00000241274 ADGRL2O95490 1459 aa16.53■□□□□ 0.24
SLITRK3-201ENST00000241274 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
SLITRK3-201ENST00000241274 SHROOM2Q13796 1616 aa16.53■□□□□ 0.24
SLITRK3-201ENST00000241274 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
SLITRK3-201ENST00000241274 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.24
SLITRK3-201ENST00000241274 SHANK2Q9UPX8 1470 aa16.52■□□□□ 0.23
SLITRK3-201ENST00000241274 FRAT2O75474 233 aaPredicted RBP16.52■□□□□ 0.23
SLITRK3-201ENST00000241274 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
SLITRK3-201ENST00000241274 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
SLITRK3-201ENST00000241274 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
SLITRK3-201ENST00000241274 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
SLITRK3-201ENST00000241274 UHRF1BP1LA0JNW5 1464 aa16.48■□□□□ 0.23
SLITRK3-201ENST00000241274 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
SLITRK3-201ENST00000241274 PLCH2O75038 1416 aa16.48■□□□□ 0.23
SLITRK3-201ENST00000241274 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
SLITRK3-201ENST00000241274 CDC42BPAQ5VT25 1732 aa16.48■□□□□ 0.23
SLITRK3-201ENST00000241274 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
SLITRK3-201ENST00000241274 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
SLITRK3-201ENST00000241274 SYCP2Q9BX26 1530 aa16.47■□□□□ 0.23
SLITRK3-201ENST00000241274 AFAP1Q8N556 730 aa16.47■□□□□ 0.23
SLITRK3-201ENST00000241274 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
SLITRK3-201ENST00000241274 SLKQ9H2G2 1235 aaPredicted RBP16.47■□□□□ 0.23
SLITRK3-201ENST00000241274 RPRD2Q5VT52 1461 aaKnown RBP16.47■□□□□ 0.23
SLITRK3-201ENST00000241274 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
SLITRK3-201ENST00000241274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.46■□□□□ 0.23
SLITRK3-201ENST00000241274 KDM5BQ9UGL1 1544 aa16.45■□□□□ 0.22
SLITRK3-201ENST00000241274 MBD5Q9P267 1494 aa16.45■□□□□ 0.22
SLITRK3-201ENST00000241274 PZPP20742 1482 aa16.44■□□□□ 0.22
SLITRK3-201ENST00000241274 SPRYD3Q8NCJ5 442 aa16.43■□□□□ 0.22
SLITRK3-201ENST00000241274 ARHGEF5Q12774 1597 aa16.43■□□□□ 0.22
SLITRK3-201ENST00000241274 TTC37Q6PGP7 1564 aa16.42■□□□□ 0.22
SLITRK3-201ENST00000241274 PREX2Q70Z35 1606 aa16.42■□□□□ 0.22
SLITRK3-201ENST00000241274 NAP1L5Q96NT1 182 aaPredicted RBP16.42■□□□□ 0.22
SLITRK3-201ENST00000241274 SAMD9LQ8IVG5 1584 aa16.42■□□□□ 0.22
SLITRK3-201ENST00000241274 WDR7Q9Y4E6 1490 aa16.42■□□□□ 0.22
SLITRK3-201ENST00000241274 CCDC144AA2RUR9 1427 aa16.41■□□□□ 0.22
SLITRK3-201ENST00000241274 KANK1Q14678 1352 aa16.41■□□□□ 0.22
SLITRK3-201ENST00000241274 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
SLITRK3-201ENST00000241274 ZCCHC11Q5TAX3 1644 aaKnown RBP16.4■□□□□ 0.22
SLITRK3-201ENST00000241274 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
SLITRK3-201ENST00000241274 WASHC2CQ9Y4E1 1318 aa16.4■□□□□ 0.22
SLITRK3-201ENST00000241274 DENND4BO75064 1496 aaPredicted RBP16.4■□□□□ 0.22
SLITRK3-201ENST00000241274 ST20-MTHFSA0A0A6YYL1 179 aa16.4■□□□□ 0.22
SLITRK3-201ENST00000241274 KIF3BO15066 747 aa16.39■□□□□ 0.21
SLITRK3-201ENST00000241274 USP47Q96K76 1375 aa16.39■□□□□ 0.21
SLITRK3-201ENST00000241274 MS4A1P11836 297 aa16.39■□□□□ 0.21
SLITRK3-201ENST00000241274 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
SLITRK3-201ENST00000241274 ASXL2Q76L83 1435 aa16.38■□□□□ 0.21
SLITRK3-201ENST00000241274 MYO5CQ9NQX4 1742 aa16.37■□□□□ 0.21
SLITRK3-201ENST00000241274 CROCC2H7BZ55 1655 aa16.37■□□□□ 0.21
SLITRK3-201ENST00000241274 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
SLITRK3-201ENST00000241274 VSIG10Q8N0Z9 540 aa16.36■□□□□ 0.21
SLITRK3-201ENST00000241274 FANCAO15360 1455 aa16.36■□□□□ 0.21
SLITRK3-201ENST00000241274 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
SLITRK3-201ENST00000241274 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
SLITRK3-201ENST00000241274 POGKQ9P215 609 aa16.35■□□□□ 0.21
SLITRK3-201ENST00000241274 CDC42BPBQ9Y5S2 1711 aa16.34■□□□□ 0.21
SLITRK3-201ENST00000241274 ADGRL1O94910 1474 aa16.32■□□□□ 0.2
SLITRK3-201ENST00000241274 DUOX2Q9NRD8 1548 aa16.32■□□□□ 0.2
SLITRK3-201ENST00000241274 RSPH6AQ9H0K4 717 aa16.32■□□□□ 0.2
SLITRK3-201ENST00000241274 ROCK2O75116 1388 aaKnown RBP16.32■□□□□ 0.2
SLITRK3-201ENST00000241274 MYBBP1AQ9BQG0 1328 aaKnown RBP16.31■□□□□ 0.2
SLITRK3-201ENST00000241274 CHGAP10645 457 aaKnown RBP16.31■□□□□ 0.2
SLITRK3-201ENST00000241274 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
SLITRK3-201ENST00000241274 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
SLITRK3-201ENST00000241274 TEX14Q8IWB6 1497 aa16.3■□□□□ 0.2
SLITRK3-201ENST00000241274 ERBINQ96RT1 1412 aa16.3■□□□□ 0.2
SLITRK3-201ENST00000241274 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
SLITRK3-201ENST00000241274 CD109Q6YHK3 1445 aa16.29■□□□□ 0.2
SLITRK3-201ENST00000241274 GGT6Q6P531 493 aa16.29■□□□□ 0.2
SLITRK3-201ENST00000241274 DHX29Q7Z478 1369 aaKnown RBP16.28■□□□□ 0.2
SLITRK3-201ENST00000241274 GLIPR1L2Q4G1C9 344 aa16.28■□□□□ 0.2
SLITRK3-201ENST00000241274 PKNOX2Q96KN3 472 aa16.28■□□□□ 0.2
SLITRK3-201ENST00000241274 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
SLITRK3-201ENST00000241274 ARHGEF12Q9NZN5 1544 aa16.28■□□□□ 0.2
SLITRK3-201ENST00000241274 RTEL1-TNFRSF6BF6WH68 1400 aa16.26■□□□□ 0.19
SLITRK3-201ENST00000241274 ABCC1P33527 1531 aa16.26■□□□□ 0.19
SLITRK3-201ENST00000241274 WDR43Q15061 677 aaKnown RBP eCLIP16.25■□□□□ 0.19
SLITRK3-201ENST00000241274 RALBP1Q15311 655 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms