RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
CTSD-201ENST00000236671 ABCC1P33527 1531 aa21.36■■□□□ 1.01
CTSD-201ENST00000236671 NEO1Q92859 1461 aa21.36■■□□□ 1.01
CTSD-201ENST00000236671 MRS2Q9HD23 443 aa21.35■■□□□ 1.01
CTSD-201ENST00000236671 KIAA1107Q9UPP5 1409 aa21.35■■□□□ 1.01
CTSD-201ENST00000236671 TRAPPC8Q9Y2L5 1435 aa21.35■■□□□ 1.01
CTSD-201ENST00000236671 ERICH6BQ5W0A0 696 aa21.35■■□□□ 1.01
CTSD-201ENST00000236671 FRMPD1Q5SYB0 1578 aa21.34■■□□□ 1.01
CTSD-201ENST00000236671 CFAP74Q9C0B2 1584 aa21.34■■□□□ 1.01
CTSD-201ENST00000236671 ZBED9Q6R2W3 1325 aa21.34■■□□□ 1.01
CTSD-201ENST00000236671 RICTORQ6R327 1708 aa21.33■■□□□ 1.01
CTSD-201ENST00000236671 FAM9BQ8IZU0 186 aa21.33■■□□□ 1.01
CTSD-201ENST00000236671 BCORL1Q5H9F3 1711 aa21.29■■□□□ 1
CTSD-201ENST00000236671 DHX29Q7Z478 1369 aaKnown RBP21.28■■□□□ 1
CTSD-201ENST00000236671 ANKRD30AQ9BXX3 1397 aa21.28■■□□□ 1
CTSD-201ENST00000236671 USP47Q96K76 1375 aa21.27■■□□□ 1
CTSD-201ENST00000236671 POGZQ7Z3K3 1410 aa21.27■■□□□ 1
CTSD-201ENST00000236671 KDM5CP41229 1560 aa21.26■□□□□ 0.99
CTSD-201ENST00000236671 PPP4R2Q9NY27 417 aa21.26■□□□□ 0.99
CTSD-201ENST00000236671 ANKRD50Q9ULJ7 1429 aa21.25■□□□□ 0.99
CTSD-201ENST00000236671 PKD2Q13563 968 aa21.25■□□□□ 0.99
CTSD-201ENST00000236671 SHANK2Q9UPX8 1470 aa21.24■□□□□ 0.99
CTSD-201ENST00000236671 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
CTSD-201ENST00000236671 UHRF1BP1Q6BDS2 1440 aa21.22■□□□□ 0.99
CTSD-201ENST00000236671 YEATS2Q9ULM3 1422 aa21.22■□□□□ 0.99
CTSD-201ENST00000236671 ZNF518AQ6AHZ1 1483 aa21.21■□□□□ 0.99
CTSD-201ENST00000236671 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
CTSD-201ENST00000236671 ARID4BQ4LE39 1312 aaPredicted RBP21.19■□□□□ 0.98
CTSD-201ENST00000236671 FANCIQ9NVI1 1328 aa21.19■□□□□ 0.98
CTSD-201ENST00000236671 C9orf84Q5VXU9 1444 aa21.19■□□□□ 0.98
CTSD-201ENST00000236671 KDM5DQ9BY66 1539 aa21.19■□□□□ 0.98
CTSD-201ENST00000236671 KIDINS220Q9ULH0 1771 aa21.19■□□□□ 0.98
CTSD-201ENST00000236671 CCDC141Q6ZP82 1450 aa21.19■□□□□ 0.98
CTSD-201ENST00000236671 MSH5O43196 834 aa21.19■□□□□ 0.98
CTSD-201ENST00000236671 PLEKHH2Q8IVE3 1493 aa21.18■□□□□ 0.98
CTSD-201ENST00000236671 ZNF326Q5BKZ1 582 aaKnown RBP21.17■□□□□ 0.98
CTSD-201ENST00000236671 SIGLEC1Q9BZZ2 1709 aa21.17■□□□□ 0.98
CTSD-201ENST00000236671 ARHGEF5Q12774 1597 aa21.17■□□□□ 0.98
CTSD-201ENST00000236671 HECW2Q9P2P5 1572 aa21.16■□□□□ 0.98
CTSD-201ENST00000236671 SMG6Q86US8 1419 aaKnown RBP21.16■□□□□ 0.98
CTSD-201ENST00000236671 SPAG9O60271 1321 aaKnown RBP21.15■□□□□ 0.98
CTSD-201ENST00000236671 NUP155O75694 1391 aa21.15■□□□□ 0.98
CTSD-201ENST00000236671 ABCA6Q8N139 1617 aa21.15■□□□□ 0.98
CTSD-201ENST00000236671 ZFYVE16Q7Z3T8 1539 aa21.15■□□□□ 0.98
CTSD-201ENST00000236671 INO80Q9ULG1 1556 aaPredicted RBP21.13■□□□□ 0.97
CTSD-201ENST00000236671 ATP7AQ04656 1500 aa21.13■□□□□ 0.97
CTSD-201ENST00000236671 ZMYM4Q5VZL5 1548 aa21.13■□□□□ 0.97
CTSD-201ENST00000236671 ROCK2O75116 1388 aaKnown RBP21.13■□□□□ 0.97
CTSD-201ENST00000236671 B4GALNT3Q6L9W6 998 aa21.11■□□□□ 0.97
CTSD-201ENST00000236671 TSPY4P0CV99 314 aa21.1■□□□□ 0.97
CTSD-201ENST00000236671 TSPY10P0CW01 314 aa21.1■□□□□ 0.97
CTSD-201ENST00000236671 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
CTSD-201ENST00000236671 DIP2CQ9Y2E4 1556 aa21.1■□□□□ 0.97
CTSD-201ENST00000236671 MLH3Q9UHC1 1453 aa21.08■□□□□ 0.97
CTSD-201ENST00000236671 KIF15Q9NS87 1388 aa21.08■□□□□ 0.97
CTSD-201ENST00000236671 ARHGEF40Q8TER5 1519 aa21.08■□□□□ 0.96
CTSD-201ENST00000236671 CARD11Q9BXL7 1154 aa21.07■□□□□ 0.96
CTSD-201ENST00000236671 NUDCQ9Y266 331 aa21.07■□□□□ 0.96
CTSD-201ENST00000236671 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
CTSD-201ENST00000236671 CNGB1Q14028 1251 aaPredicted RBP21.05■□□□□ 0.96
CTSD-201ENST00000236671 PNISRQ8TF01 805 aaKnown RBP21.04■□□□□ 0.96
CTSD-201ENST00000236671 E9PCH4 1651 aa21.04■□□□□ 0.96
CTSD-201ENST00000236671 RSPH4AQ5TD94 716 aa21.03■□□□□ 0.96
CTSD-201ENST00000236671 MAST1Q9Y2H9 1570 aa21.03■□□□□ 0.96
CTSD-201ENST00000236671 MLECQ14165 292 aa21.01■□□□□ 0.95
CTSD-201ENST00000236671 FAM135AQ9P2D6 1515 aa21■□□□□ 0.95
CTSD-201ENST00000236671 ST20-MTHFSA0A0A6YYL1 179 aa21■□□□□ 0.95
CTSD-201ENST00000236671 MAGI2Q86UL8 1455 aa21■□□□□ 0.95
CTSD-201ENST00000236671 LRPPRCP42704 1394 aaKnown RBP20.99■□□□□ 0.95
CTSD-201ENST00000236671 RTEL1-TNFRSF6BF6WH68 1400 aa20.99■□□□□ 0.95
CTSD-201ENST00000236671 KDM2AQ9Y2K7 1162 aa20.99■□□□□ 0.95
CTSD-201ENST00000236671 ATP10AO60312 1499 aa20.98■□□□□ 0.95
CTSD-201ENST00000236671 PLXNC1O60486 1568 aa20.98■□□□□ 0.95
CTSD-201ENST00000236671 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
CTSD-201ENST00000236671 DCAF11Q8TEB1 546 aa20.98■□□□□ 0.95
CTSD-201ENST00000236671 KTN1Q86UP2 1357 aaKnown RBP20.98■□□□□ 0.95
CTSD-201ENST00000236671 A2MP01023 1474 aa20.97■□□□□ 0.95
CTSD-201ENST00000236671 BRD4O60885 1362 aaPredicted RBP20.96■□□□□ 0.95
CTSD-201ENST00000236671 TRPM1Q7Z4N2 1603 aa20.96■□□□□ 0.95
CTSD-201ENST00000236671 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.94
CTSD-201ENST00000236671 PRAG1Q86YV5 1406 aa20.94■□□□□ 0.94
CTSD-201ENST00000236671 RALBP1Q15311 655 aa20.93■□□□□ 0.94
CTSD-201ENST00000236671 UNC13BO14795 1591 aa20.93■□□□□ 0.94
CTSD-201ENST00000236671 KIF3BO15066 747 aa20.92■□□□□ 0.94
CTSD-201ENST00000236671 GGT6Q6P531 493 aa20.91■□□□□ 0.94
CTSD-201ENST00000236671 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
CTSD-201ENST00000236671 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
CTSD-201ENST00000236671 SENP3-EIF4A1A0A087X0R7 540 aa20.9■□□□□ 0.94
CTSD-201ENST00000236671 DUOX2Q9NRD8 1548 aa20.89■□□□□ 0.94
CTSD-201ENST00000236671 PLA2R1Q13018 1463 aa20.89■□□□□ 0.93
CTSD-201ENST00000236671 GPRASP1Q5JY77 1395 aa20.87■□□□□ 0.93
CTSD-201ENST00000236671 PARD3Q8TEW0 1356 aa20.87■□□□□ 0.93
CTSD-201ENST00000236671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.87■□□□□ 0.93
CTSD-201ENST00000236671 CCDC136Q96JN2 1154 aa20.87■□□□□ 0.93
CTSD-201ENST00000236671 LAMC1P11047 1609 aa20.86■□□□□ 0.93
CTSD-201ENST00000236671 REREQ9P2R6 1566 aa20.86■□□□□ 0.93
CTSD-201ENST00000236671 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
CTSD-201ENST00000236671 IQGAP3Q86VI3 1631 aa20.85■□□□□ 0.93
CTSD-201ENST00000236671 PRDM15P57071 1507 aaPredicted RBP20.84■□□□□ 0.93
CTSD-201ENST00000236671 MROH1Q8NDA8 1641 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms