RNA–Protein interactions for RNA: ENST00000229633.6

HINT3-201, Transcript of histidine triad nucleotide binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HINT3, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3-201ENST00000229633 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
HINT3-201ENST00000229633 NUP160Q12769 1436 aa18.24■□□□□ 0.51
HINT3-201ENST00000229633 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
HINT3-201ENST00000229633 NLRP13Q86W25 1043 aa18.22■□□□□ 0.51
HINT3-201ENST00000229633 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
HINT3-201ENST00000229633 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
HINT3-201ENST00000229633 SMG6Q86US8 1419 aaKnown RBP18.22■□□□□ 0.51
HINT3-201ENST00000229633 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
HINT3-201ENST00000229633 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.51
HINT3-201ENST00000229633 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
HINT3-201ENST00000229633 RALBP1Q15311 655 aa18.21■□□□□ 0.51
HINT3-201ENST00000229633 ERICH6BQ5W0A0 696 aa18.21■□□□□ 0.51
HINT3-201ENST00000229633 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
HINT3-201ENST00000229633 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
HINT3-201ENST00000229633 KDM5CP41229 1560 aa18.19■□□□□ 0.5
HINT3-201ENST00000229633 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
HINT3-201ENST00000229633 CCDC146Q8IYE0 955 aa18.19■□□□□ 0.5
HINT3-201ENST00000229633 RALGAPBQ86X10 1494 aa18.19■□□□□ 0.5
HINT3-201ENST00000229633 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
HINT3-201ENST00000229633 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
HINT3-201ENST00000229633 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
HINT3-201ENST00000229633 ANP32AP39687 249 aaKnown RBP18.18■□□□□ 0.5
HINT3-201ENST00000229633 TMF1P82094 1093 aa18.18■□□□□ 0.5
HINT3-201ENST00000229633 FAM135AQ9P2D6 1515 aa18.17■□□□□ 0.5
HINT3-201ENST00000229633 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
HINT3-201ENST00000229633 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
HINT3-201ENST00000229633 BCL11AQ9H165 835 aa18.15■□□□□ 0.5
HINT3-201ENST00000229633 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
HINT3-201ENST00000229633 ABCA8O94911 1581 aa18.14■□□□□ 0.49
HINT3-201ENST00000229633 KIF3BO15066 747 aa18.14■□□□□ 0.49
HINT3-201ENST00000229633 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
HINT3-201ENST00000229633 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
HINT3-201ENST00000229633 TESK2Q96S53 571 aa18.13■□□□□ 0.49
HINT3-201ENST00000229633 NUTM2DQ5VT03 806 aaPredicted RBP18.13■□□□□ 0.49
HINT3-201ENST00000229633 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
HINT3-201ENST00000229633 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
HINT3-201ENST00000229633 PRAG1Q86YV5 1406 aa18.12■□□□□ 0.49
HINT3-201ENST00000229633 ARID4BQ4LE39 1312 aaPredicted RBP18.12■□□□□ 0.49
HINT3-201ENST00000229633 C20orf194Q5TEA3 1177 aa18.12■□□□□ 0.49
HINT3-201ENST00000229633 SPAG9O60271 1321 aaKnown RBP18.12■□□□□ 0.49
HINT3-201ENST00000229633 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
HINT3-201ENST00000229633 LAS1LQ9Y4W2 734 aaKnown RBP18.11■□□□□ 0.49
HINT3-201ENST00000229633 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
HINT3-201ENST00000229633 SAMD9LQ8IVG5 1584 aa18.11■□□□□ 0.49
HINT3-201ENST00000229633 CRBNQ96SW2 442 aa18.11■□□□□ 0.49
HINT3-201ENST00000229633 UHRF1BP1Q6BDS2 1440 aa18.11■□□□□ 0.49
HINT3-201ENST00000229633 CROCC2H7BZ55 1655 aa18.1■□□□□ 0.49
HINT3-201ENST00000229633 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
HINT3-201ENST00000229633 PLA2R1Q13018 1463 aa18.09■□□□□ 0.49
HINT3-201ENST00000229633 A2MP01023 1474 aa18.09■□□□□ 0.49
HINT3-201ENST00000229633 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
HINT3-201ENST00000229633 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
HINT3-201ENST00000229633 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
HINT3-201ENST00000229633 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
HINT3-201ENST00000229633 SHANK2Q9UPX8 1470 aa18.06■□□□□ 0.48
HINT3-201ENST00000229633 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
HINT3-201ENST00000229633 TRAPPC8Q9Y2L5 1435 aa18.05■□□□□ 0.48
HINT3-201ENST00000229633 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
HINT3-201ENST00000229633 SAFB2Q14151 953 aaKnown RBP eCLIP18.04■□□□□ 0.48
HINT3-201ENST00000229633 DEKP35659 375 aaKnown RBP18.03■□□□□ 0.48
HINT3-201ENST00000229633 RGS3P49796 1198 aa18.02■□□□□ 0.48
HINT3-201ENST00000229633 GGT6Q6P531 493 aa18.02■□□□□ 0.48
HINT3-201ENST00000229633 ARHGEF12Q9NZN5 1544 aa18.02■□□□□ 0.48
HINT3-201ENST00000229633 PARD3Q8TEW0 1356 aa18.02■□□□□ 0.48
HINT3-201ENST00000229633 PPP2R1AP30153 589 aa18.01■□□□□ 0.47
HINT3-201ENST00000229633 SLC4A3P48751 1232 aa18.01■□□□□ 0.47
HINT3-201ENST00000229633 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
HINT3-201ENST00000229633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.01■□□□□ 0.47
HINT3-201ENST00000229633 KDM5DQ9BY66 1539 aa18.01■□□□□ 0.47
HINT3-201ENST00000229633 RNF123Q5XPI4 1314 aa18.01■□□□□ 0.47
HINT3-201ENST00000229633 IPO9Q96P70 1041 aaKnown RBP18■□□□□ 0.47
HINT3-201ENST00000229633 APAF1O14727 1248 aa18■□□□□ 0.47
HINT3-201ENST00000229633 PDE4AP27815 886 aa18■□□□□ 0.47
HINT3-201ENST00000229633 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
HINT3-201ENST00000229633 RRP7AQ9Y3A4 280 aaKnown RBP18■□□□□ 0.47
HINT3-201ENST00000229633 TRAK1Q9UPV9 953 aa17.99■□□□□ 0.47
HINT3-201ENST00000229633 POLR1AO95602 1720 aaPredicted RBP17.99■□□□□ 0.47
HINT3-201ENST00000229633 TMEM132EQ6IEE7 984 aa17.97■□□□□ 0.47
HINT3-201ENST00000229633 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.47
HINT3-201ENST00000229633 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
HINT3-201ENST00000229633 CANXP27824 592 aaKnown RBP17.94■□□□□ 0.46
HINT3-201ENST00000229633 CHD1O14646 1710 aa17.94■□□□□ 0.46
HINT3-201ENST00000229633 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
HINT3-201ENST00000229633 COL17A1Q9UMD9 1497 aaPredicted RBP17.93■□□□□ 0.46
HINT3-201ENST00000229633 PREX2Q70Z35 1606 aa17.93■□□□□ 0.46
HINT3-201ENST00000229633 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
HINT3-201ENST00000229633 ARHGEF5Q12774 1597 aa17.93■□□□□ 0.46
HINT3-201ENST00000229633 PDE3BQ13370 1112 aa17.93■□□□□ 0.46
HINT3-201ENST00000229633 BCAR3O75815 825 aa17.92■□□□□ 0.46
HINT3-201ENST00000229633 FRAT1Q92837 279 aaPredicted RBP17.92■□□□□ 0.46
HINT3-201ENST00000229633 BCL2L13Q9BXK5 485 aa17.92■□□□□ 0.46
HINT3-201ENST00000229633 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
HINT3-201ENST00000229633 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
HINT3-201ENST00000229633 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
HINT3-201ENST00000229633 MAGI2Q86UL8 1455 aa17.9■□□□□ 0.46
HINT3-201ENST00000229633 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
HINT3-201ENST00000229633 TCERG1O14776 1098 aaKnown RBP17.88■□□□□ 0.45
HINT3-201ENST00000229633 PLCH2O75038 1416 aa17.88■□□□□ 0.45
HINT3-201ENST00000229633 SLC12A5Q9H2X9 1139 aa17.88■□□□□ 0.45
HINT3-201ENST00000229633 STK26Q9P289 416 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms