RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 FRAT1Q92837 279 aaPredicted RBP7.48□□□□□ -1.21
RFX4-201ENST00000229387 PTPRKQ15262 1439 aa7.48□□□□□ -1.21
RFX4-201ENST00000229387 ZBTB7CA1YPR0 619 aa7.48□□□□□ -1.21
RFX4-201ENST00000229387 GPBP1L1Q9HC44 474 aaPredicted RBP7.48□□□□□ -1.21
RFX4-201ENST00000229387 POLR3GLQ9BT43 218 aa7.48□□□□□ -1.21
RFX4-201ENST00000229387 TPM2P07951 284 aa7.47□□□□□ -1.21
RFX4-201ENST00000229387 UTP14CQ5TAP6 766 aaKnown RBP7.47□□□□□ -1.21
RFX4-201ENST00000229387 PNNQ9H307 717 aaKnown RBP7.47□□□□□ -1.21
RFX4-201ENST00000229387 CIZ1Q9ULV3 898 aaPredicted RBP7.47□□□□□ -1.21
RFX4-201ENST00000229387 SECISBP2LQ93073 1101 aaKnown RBP7.46□□□□□ -1.21
RFX4-201ENST00000229387 DCAF11Q8TEB1 546 aa7.46□□□□□ -1.22
RFX4-201ENST00000229387 TONSLQ96HA7 1378 aa7.45□□□□□ -1.22
RFX4-201ENST00000229387 FMN1Q68DA7 1419 aa7.45□□□□□ -1.22
RFX4-201ENST00000229387 CASKIN1Q8WXD9 1431 aa7.45□□□□□ -1.22
RFX4-201ENST00000229387 MAPKBP1O60336 1514 aa7.45□□□□□ -1.22
RFX4-201ENST00000229387 FGD6Q6ZV73 1430 aa7.45□□□□□ -1.22
RFX4-201ENST00000229387 PPP1R15AO75807 674 aaPredicted RBP7.45□□□□□ -1.22
RFX4-201ENST00000229387 KCNV2Q8TDN2 545 aa7.45□□□□□ -1.22
RFX4-201ENST00000229387 MAP7D2Q96T17 732 aa7.45□□□□□ -1.22
RFX4-201ENST00000229387 FOXD4L5Q5VV16 416 aaPredicted RBP7.44□□□□□ -1.22
RFX4-201ENST00000229387 FOXD4L4Q8WXT5 416 aaPredicted RBP7.44□□□□□ -1.22
RFX4-201ENST00000229387 RNF25Q96BH1 459 aaPredicted RBP7.44□□□□□ -1.22
RFX4-201ENST00000229387 TMEM51Q9NW97 253 aa7.44□□□□□ -1.22
RFX4-201ENST00000229387 ERCC6Q03468 1493 aa7.44□□□□□ -1.22
RFX4-201ENST00000229387 KCTD17Q8N5Z5 321 aa7.43□□□□□ -1.22
RFX4-201ENST00000229387 NCOA2Q15596 1464 aa7.43□□□□□ -1.22
RFX4-201ENST00000229387 CDK13Q14004 1512 aaKnown RBP7.43□□□□□ -1.22
RFX4-201ENST00000229387 WDR97A6NE52 1622 aa7.43□□□□□ -1.22
RFX4-201ENST00000229387 GTPBP6O43824 516 aaPredicted RBP7.43□□□□□ -1.22
RFX4-201ENST00000229387 RAD21O60216 631 aa7.42□□□□□ -1.22
RFX4-201ENST00000229387 ZC3H15Q8WU90 426 aaKnown RBP7.42□□□□□ -1.22
RFX4-201ENST00000229387 KIF21AQ7Z4S6 1674 aa7.42□□□□□ -1.22
RFX4-201ENST00000229387 CDK11BP21127 795 aaKnown RBP7.42□□□□□ -1.22
RFX4-201ENST00000229387 LAMC3Q9Y6N6 1575 aa7.41□□□□□ -1.22
RFX4-201ENST00000229387 HOXD11P31277 338 aaPredicted RBP7.41□□□□□ -1.22
RFX4-201ENST00000229387 DDRGK1Q96HY6 314 aa7.41□□□□□ -1.22
RFX4-201ENST00000229387 ZNF830Q96NB3 372 aaPredicted RBP7.41□□□□□ -1.22
RFX4-201ENST00000229387 FYCO1Q9BQS8 1478 aa7.41□□□□□ -1.22
RFX4-201ENST00000229387 NFKBIBQ15653 356 aa7.41□□□□□ -1.22
RFX4-201ENST00000229387 SNAPC4Q5SXM2 1469 aa7.41□□□□□ -1.22
RFX4-201ENST00000229387 ZNF219Q9P2Y4 722 aaPredicted RBP7.4□□□□□ -1.22
RFX4-201ENST00000229387 LAS1LQ9Y4W2 734 aaKnown RBP7.4□□□□□ -1.22
RFX4-201ENST00000229387 IRX6P78412 446 aaPredicted RBP7.4□□□□□ -1.22
RFX4-201ENST00000229387 CCDC18Q5T9S5 1454 aa7.4□□□□□ -1.22
RFX4-201ENST00000229387 ANP32CO43423 234 aa7.4□□□□□ -1.23
RFX4-201ENST00000229387 L1TD1Q5T7N2 865 aaKnown RBP7.4□□□□□ -1.23
RFX4-201ENST00000229387 MPHOSPH9Q99550 1183 aa7.4□□□□□ -1.23
RFX4-201ENST00000229387 CFDP1Q9UEE9 299 aaPredicted RBP7.39□□□□□ -1.23
RFX4-201ENST00000229387 MTMR7Q9Y216 660 aa7.39□□□□□ -1.23
RFX4-201ENST00000229387 MAGI3Q5TCQ9 1506 aa7.39□□□□□ -1.23
RFX4-201ENST00000229387 MMP14P50281 582 aa7.39□□□□□ -1.23
RFX4-201ENST00000229387 L3MBTL2Q969R5 705 aa7.39□□□□□ -1.23
RFX4-201ENST00000229387 JPH4Q96JJ6 628 aa7.39□□□□□ -1.23
RFX4-201ENST00000229387 MYOM3Q5VTT5 1437 aa7.39□□□□□ -1.23
RFX4-201ENST00000229387 DMTNQ08495 405 aa7.39□□□□□ -1.23
RFX4-201ENST00000229387 MKRN3Q13064 507 aaKnown RBP7.39□□□□□ -1.23
RFX4-201ENST00000229387 RGS22Q8NE09 1264 aa7.39□□□□□ -1.23
RFX4-201ENST00000229387 RBM25P49756 843 aaKnown RBP7.38□□□□□ -1.23
RFX4-201ENST00000229387 AEBP1Q8IUX7 1158 aa7.38□□□□□ -1.23
RFX4-201ENST00000229387 ANP32BQ92688 251 aaKnown RBP7.38□□□□□ -1.23
RFX4-201ENST00000229387 DCAF8L1A6NGE4 600 aa7.38□□□□□ -1.23
RFX4-201ENST00000229387 TERF1P54274 439 aa7.38□□□□□ -1.23
RFX4-201ENST00000229387 NAIPQ13075 1403 aa7.38□□□□□ -1.23
RFX4-201ENST00000229387 PRG4Q92954 1404 aaPredicted RBP7.38□□□□□ -1.23
RFX4-201ENST00000229387 TAF3Q5VWG9 929 aa7.37□□□□□ -1.23
RFX4-201ENST00000229387 HS6ST3Q8IZP7 471 aa7.37□□□□□ -1.23
RFX4-201ENST00000229387 KIF20AO95235 890 aa7.37□□□□□ -1.23
RFX4-201ENST00000229387 HSPA5P11021 654 aaKnown RBP7.37□□□□□ -1.23
RFX4-201ENST00000229387 MRC2Q9UBG0 1479 aa7.37□□□□□ -1.23
RFX4-201ENST00000229387 MTERF4Q7Z6M4 381 aaKnown RBP7.37□□□□□ -1.23
RFX4-201ENST00000229387 CCDC82Q8N4S0 544 aa7.37□□□□□ -1.23
RFX4-201ENST00000229387 GRIN2BQ13224 1484 aa7.36□□□□□ -1.23
RFX4-201ENST00000229387 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
RFX4-201ENST00000229387 PLB1Q6P1J6 1458 aa7.36□□□□□ -1.23
RFX4-201ENST00000229387 EFCAB5A4FU69 1503 aa7.36□□□□□ -1.23
RFX4-201ENST00000229387 HNRNPMP52272 730 aaKnown RBP eCLIP7.36□□□□□ -1.23
RFX4-201ENST00000229387 CCDC184Q52MB2 194 aa7.36□□□□□ -1.23
RFX4-201ENST00000229387 B4GALNT3Q6L9W6 998 aa7.36□□□□□ -1.23
RFX4-201ENST00000229387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.36□□□□□ -1.23
RFX4-201ENST00000229387 ABCA5Q8WWZ7 1642 aa7.35□□□□□ -1.23
RFX4-201ENST00000229387 CUL7Q14999 1698 aa7.35□□□□□ -1.23
RFX4-201ENST00000229387 EPRSP07814 1512 aaKnown RBP7.35□□□□□ -1.23
RFX4-201ENST00000229387 MAP3K1Q13233 1512 aa7.35□□□□□ -1.23
RFX4-201ENST00000229387 CLGNO14967 610 aa7.34□□□□□ -1.23
RFX4-201ENST00000229387 NBPF8Q3BBV2 869 aa7.34□□□□□ -1.23
RFX4-201ENST00000229387 FAM9BQ8IZU0 186 aa7.34□□□□□ -1.23
RFX4-201ENST00000229387 THOC2Q8NI27 1593 aaKnown RBP7.34□□□□□ -1.23
RFX4-201ENST00000229387 HNRNPUQ00839 825 aaKnown RBP eCLIP7.34□□□□□ -1.23
RFX4-201ENST00000229387 PLCD3Q8N3E9 789 aa7.34□□□□□ -1.23
RFX4-201ENST00000229387 TARBP1Q13395 1621 aaKnown RBP7.34□□□□□ -1.23
RFX4-201ENST00000229387 HFM1A2PYH4 1435 aa7.34□□□□□ -1.23
RFX4-201ENST00000229387 IRX3P78415 501 aaPredicted RBP7.33□□□□□ -1.24
RFX4-201ENST00000229387 SLC20A2Q08357 652 aa7.33□□□□□ -1.24
RFX4-201ENST00000229387 PLEKHD1A6NEE1 506 aa7.33□□□□□ -1.24
RFX4-201ENST00000229387 RGL3Q3MIN7 710 aa7.33□□□□□ -1.24
RFX4-201ENST00000229387 UACAQ9BZF9 1416 aa7.33□□□□□ -1.24
RFX4-201ENST00000229387 TNNT2P45379 298 aaPredicted RBP7.33□□□□□ -1.24
RFX4-201ENST00000229387 CNPY4Q8N129 248 aa7.33□□□□□ -1.24
RFX4-201ENST00000229387 GTPBP4Q9BZE4 634 aaKnown RBP7.33□□□□□ -1.24
RFX4-201ENST00000229387 CTTNBP2Q8WZ74 1663 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms