RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 GLI2P10070 1586 aa10.52□□□□□ -0.73
NANOG-201ENST00000229307 FANCAO15360 1455 aa10.52□□□□□ -0.73
NANOG-201ENST00000229307 DIP2BQ9P265 1576 aa10.51□□□□□ -0.73
NANOG-201ENST00000229307 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
NANOG-201ENST00000229307 ARXQ96QS3 562 aa10.51□□□□□ -0.73
NANOG-201ENST00000229307 ADGRL1O94910 1474 aa10.51□□□□□ -0.73
NANOG-201ENST00000229307 NPHP1O15259 732 aa10.5□□□□□ -0.73
NANOG-201ENST00000229307 NUTM2DQ5VT03 806 aaPredicted RBP10.5□□□□□ -0.73
NANOG-201ENST00000229307 AFAP1Q8N556 730 aa10.5□□□□□ -0.73
NANOG-201ENST00000229307 ZCCHC11Q5TAX3 1644 aaKnown RBP10.5□□□□□ -0.73
NANOG-201ENST00000229307 CCDC9Q9Y3X0 531 aaKnown RBP10.5□□□□□ -0.73
NANOG-201ENST00000229307 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
NANOG-201ENST00000229307 U2SURPO15042 1029 aaKnown RBP10.49□□□□□ -0.73
NANOG-201ENST00000229307 ABCA8O94911 1581 aa10.49□□□□□ -0.73
NANOG-201ENST00000229307 CFAP74Q9C0B2 1584 aa10.49□□□□□ -0.73
NANOG-201ENST00000229307 ANKRD50Q9ULJ7 1429 aa10.49□□□□□ -0.73
NANOG-201ENST00000229307 THEMISQ8N1K5 641 aaPredicted RBP10.49□□□□□ -0.73
NANOG-201ENST00000229307 SOX12O15370 315 aa10.48□□□□□ -0.73
NANOG-201ENST00000229307 TNNT2P45379 298 aaPredicted RBP10.48□□□□□ -0.73
NANOG-201ENST00000229307 KIF14Q15058 1648 aa10.48□□□□□ -0.73
NANOG-201ENST00000229307 CC2D1BQ5T0F9 858 aaKnown RBP10.47□□□□□ -0.73
NANOG-201ENST00000229307 ZNF644Q9H582 1327 aaPredicted RBP10.46□□□□□ -0.73
NANOG-201ENST00000229307 ATF3P18847 181 aa10.46□□□□□ -0.73
NANOG-201ENST00000229307 RTF1Q92541 710 aaKnown RBP10.46□□□□□ -0.73
NANOG-201ENST00000229307 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
NANOG-201ENST00000229307 PLCH2O75038 1416 aa10.46□□□□□ -0.74
NANOG-201ENST00000229307 EVC2Q86UK5 1308 aa10.45□□□□□ -0.74
NANOG-201ENST00000229307 CHMP4BQ9H444 224 aaKnown RBP10.45□□□□□ -0.74
NANOG-201ENST00000229307 KTN1Q86UP2 1357 aaKnown RBP10.45□□□□□ -0.74
NANOG-201ENST00000229307 HSPA5P11021 654 aaKnown RBP10.45□□□□□ -0.74
NANOG-201ENST00000229307 NUP153P49790 1475 aaKnown RBP10.45□□□□□ -0.74
NANOG-201ENST00000229307 CFAP43Q8NDM7 1665 aa10.45□□□□□ -0.74
NANOG-201ENST00000229307 TRAK1Q9UPV9 953 aa10.44□□□□□ -0.74
NANOG-201ENST00000229307 C9orf84Q5VXU9 1444 aa10.44□□□□□ -0.74
NANOG-201ENST00000229307 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
NANOG-201ENST00000229307 DHX57Q6P158 1386 aaKnown RBP10.44□□□□□ -0.74
NANOG-201ENST00000229307 MEX3CQ5U5Q3 659 aaKnown RBP10.43□□□□□ -0.74
NANOG-201ENST00000229307 PPP6R1Q9UPN7 881 aa10.43□□□□□ -0.74
NANOG-201ENST00000229307 SUPT6HQ7KZ85 1726 aaKnown RBP10.43□□□□□ -0.74
NANOG-201ENST00000229307 CALD1Q05682 793 aaKnown RBP10.43□□□□□ -0.74
NANOG-201ENST00000229307 LAS1LQ9Y4W2 734 aaKnown RBP10.43□□□□□ -0.74
NANOG-201ENST00000229307 UPF2Q9HAU5 1272 aaKnown RBP10.43□□□□□ -0.74
NANOG-201ENST00000229307 SLC52A1Q9NWF4 448 aa10.42□□□□□ -0.74
NANOG-201ENST00000229307 ZNF518AQ6AHZ1 1483 aa10.42□□□□□ -0.74
NANOG-201ENST00000229307 MS4A1P11836 297 aa10.42□□□□□ -0.74
NANOG-201ENST00000229307 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
NANOG-201ENST00000229307 TXNDC2Q86VQ3 553 aa10.41□□□□□ -0.74
NANOG-201ENST00000229307 RRBP1Q9P2E9 1410 aaKnown RBP10.41□□□□□ -0.74
NANOG-201ENST00000229307 SAMD9Q5K651 1589 aa10.41□□□□□ -0.74
NANOG-201ENST00000229307 CDK13Q14004 1512 aaKnown RBP10.41□□□□□ -0.74
NANOG-201ENST00000229307 PRKCSHP14314 528 aaPredicted RBP10.41□□□□□ -0.74
NANOG-201ENST00000229307 ANKLE2Q86XL3 938 aa10.41□□□□□ -0.74
NANOG-201ENST00000229307 AMPHP49418 695 aa10.41□□□□□ -0.74
NANOG-201ENST00000229307 NEUROD2Q15784 382 aa10.4□□□□□ -0.74
NANOG-201ENST00000229307 GTF3C3Q9Y5Q9 886 aa10.4□□□□□ -0.74
NANOG-201ENST00000229307 RALBP1Q15311 655 aa10.4□□□□□ -0.75
NANOG-201ENST00000229307 EVA1CP58658 441 aa10.39□□□□□ -0.75
NANOG-201ENST00000229307 PSME1Q06323 249 aa10.39□□□□□ -0.75
NANOG-201ENST00000229307 ARAP3Q8WWN8 1544 aa10.39□□□□□ -0.75
NANOG-201ENST00000229307 TIAM1Q13009 1591 aa10.39□□□□□ -0.75
NANOG-201ENST00000229307 ATP10AO60312 1499 aa10.38□□□□□ -0.75
NANOG-201ENST00000229307 ZFYVE16Q7Z3T8 1539 aa10.38□□□□□ -0.75
NANOG-201ENST00000229307 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
NANOG-201ENST00000229307 CNTLNQ9NXG0 1405 aa10.38□□□□□ -0.75
NANOG-201ENST00000229307 CCDC141Q6ZP82 1450 aa10.38□□□□□ -0.75
NANOG-201ENST00000229307 FTSJ3Q8IY81 847 aaKnown RBP10.38□□□□□ -0.75
NANOG-201ENST00000229307 COG3Q96JB2 828 aa10.37□□□□□ -0.75
NANOG-201ENST00000229307 NUTM2FA1L443 756 aa10.37□□□□□ -0.75
NANOG-201ENST00000229307 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
NANOG-201ENST00000229307 EIF5BO60841 1220 aaKnown RBP10.37□□□□□ -0.75
NANOG-201ENST00000229307 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
NANOG-201ENST00000229307 RPGRIP1LQ68CZ1 1315 aa10.36□□□□□ -0.75
NANOG-201ENST00000229307 RTL5Q5HYW3 569 aaPredicted RBP10.35□□□□□ -0.75
NANOG-201ENST00000229307 LMOD3Q0VAK6 560 aa10.35□□□□□ -0.75
NANOG-201ENST00000229307 TMX4Q9H1E5 349 aaPredicted RBP10.35□□□□□ -0.75
NANOG-201ENST00000229307 U2AF1L5P0DN76 240 aaPredicted RBP10.34□□□□□ -0.75
NANOG-201ENST00000229307 U2AF1Q01081 240 aaKnown RBP eCLIP10.34□□□□□ -0.75
NANOG-201ENST00000229307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.34□□□□□ -0.75
NANOG-201ENST00000229307 CGNL1Q0VF96 1302 aa10.34□□□□□ -0.75
NANOG-201ENST00000229307 DAPK1P53355 1430 aa10.34□□□□□ -0.75
NANOG-201ENST00000229307 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
NANOG-201ENST00000229307 CCDC136Q96JN2 1154 aa10.34□□□□□ -0.75
NANOG-201ENST00000229307 CENPJQ9HC77 1338 aaPredicted RBP10.34□□□□□ -0.75
NANOG-201ENST00000229307 GPRASP1Q5JY77 1395 aa10.33□□□□□ -0.76
NANOG-201ENST00000229307 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
NANOG-201ENST00000229307 ABCA9Q8IUA7 1624 aa10.32□□□□□ -0.76
NANOG-201ENST00000229307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.32□□□□□ -0.76
NANOG-201ENST00000229307 PCF11O94913 1555 aaKnown RBP10.32□□□□□ -0.76
NANOG-201ENST00000229307 HSP90AA1P07900 732 aaKnown RBP10.32□□□□□ -0.76
NANOG-201ENST00000229307 MAP3K4Q9Y6R4 1608 aa10.32□□□□□ -0.76
NANOG-201ENST00000229307 MIER1Q8N108 512 aa10.31□□□□□ -0.76
NANOG-201ENST00000229307 ROCK1Q13464 1354 aa10.31□□□□□ -0.76
NANOG-201ENST00000229307 KIF13AQ9H1H9 1805 aa10.31□□□□□ -0.76
NANOG-201ENST00000229307 MAP3K1Q13233 1512 aa10.31□□□□□ -0.76
NANOG-201ENST00000229307 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
NANOG-201ENST00000229307 FKBP8Q14318 412 aa10.31□□□□□ -0.76
NANOG-201ENST00000229307 CAMSAP2Q08AD1 1489 aa10.3□□□□□ -0.76
NANOG-201ENST00000229307 KIAA1107Q9UPP5 1409 aa10.3□□□□□ -0.76
NANOG-201ENST00000229307 ANP32AP39687 249 aaKnown RBP10.3□□□□□ -0.76
NANOG-201ENST00000229307 ST20-MTHFSA0A0A6YYL1 179 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms