RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 CEP170Q5SW79 1584 aa20.65■□□□□ 0.9
PXN-201ENST00000228307 WDR43Q15061 677 aaKnown RBP eCLIP20.65■□□□□ 0.9
PXN-201ENST00000228307 ARHGAP5Q13017 1502 aa20.65■□□□□ 0.9
PXN-201ENST00000228307 PDE4AP27815 886 aa20.65■□□□□ 0.9
PXN-201ENST00000228307 GPATCH8Q9UKJ3 1502 aaKnown RBP20.64■□□□□ 0.9
PXN-201ENST00000228307 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.9
PXN-201ENST00000228307 SLC4A3P48751 1232 aa20.64■□□□□ 0.9
PXN-201ENST00000228307 NBPF1Q3BBV0 1214 aa20.64■□□□□ 0.89
PXN-201ENST00000228307 ROCK2O75116 1388 aaKnown RBP20.64■□□□□ 0.89
PXN-201ENST00000228307 RAPGEF6Q8TEU7 1601 aa20.62■□□□□ 0.89
PXN-201ENST00000228307 NCOA1Q15788 1441 aa20.61■□□□□ 0.89
PXN-201ENST00000228307 TNNT2P45379 298 aaPredicted RBP20.6■□□□□ 0.89
PXN-201ENST00000228307 IL27Q8NEV9 243 aa20.6■□□□□ 0.89
PXN-201ENST00000228307 ANO8Q9HCE9 1232 aaPredicted RBP20.6■□□□□ 0.89
PXN-201ENST00000228307 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.89
PXN-201ENST00000228307 USP47Q96K76 1375 aa20.58■□□□□ 0.88
PXN-201ENST00000228307 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.57■□□□□ 0.88
PXN-201ENST00000228307 RAPGEF3O95398 923 aa20.56■□□□□ 0.88
PXN-201ENST00000228307 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
PXN-201ENST00000228307 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
PXN-201ENST00000228307 CCDC144AA2RUR9 1427 aa20.55■□□□□ 0.88
PXN-201ENST00000228307 NUP160Q12769 1436 aa20.55■□□□□ 0.88
PXN-201ENST00000228307 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
PXN-201ENST00000228307 KDM6BO15054 1643 aa20.52■□□□□ 0.88
PXN-201ENST00000228307 STK26Q9P289 416 aa20.52■□□□□ 0.88
PXN-201ENST00000228307 KIF14Q15058 1648 aa20.52■□□□□ 0.87
PXN-201ENST00000228307 SCAPERQ9BY12 1400 aa20.51■□□□□ 0.87
PXN-201ENST00000228307 ARID4BQ4LE39 1312 aaPredicted RBP20.5■□□□□ 0.87
PXN-201ENST00000228307 RALBP1Q15311 655 aa20.5■□□□□ 0.87
PXN-201ENST00000228307 CDCA7LQ96GN5 454 aa20.49■□□□□ 0.87
PXN-201ENST00000228307 NLRP13Q86W25 1043 aa20.48■□□□□ 0.87
PXN-201ENST00000228307 SKAP1Q86WV1 359 aa20.48■□□□□ 0.87
PXN-201ENST00000228307 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
PXN-201ENST00000228307 PNISRQ8TF01 805 aaKnown RBP20.47■□□□□ 0.87
PXN-201ENST00000228307 KIAA1107Q9UPP5 1409 aa20.47■□□□□ 0.87
PXN-201ENST00000228307 CRBNQ96SW2 442 aa20.47■□□□□ 0.87
PXN-201ENST00000228307 KTN1Q86UP2 1357 aaKnown RBP20.47■□□□□ 0.87
PXN-201ENST00000228307 KNSTRNQ9Y448 316 aa20.47■□□□□ 0.87
PXN-201ENST00000228307 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
PXN-201ENST00000228307 ROCK1Q13464 1354 aa20.46■□□□□ 0.87
PXN-201ENST00000228307 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
PXN-201ENST00000228307 NEUROD2Q15784 382 aa20.45■□□□□ 0.86
PXN-201ENST00000228307 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
PXN-201ENST00000228307 LRRIQ1Q96JM4 1722 aa20.44■□□□□ 0.86
PXN-201ENST00000228307 KANK1Q14678 1352 aa20.44■□□□□ 0.86
PXN-201ENST00000228307 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
PXN-201ENST00000228307 FAM69CQ0P6D2 419 aa20.43■□□□□ 0.86
PXN-201ENST00000228307 SMG6Q86US8 1419 aaKnown RBP20.43■□□□□ 0.86
PXN-201ENST00000228307 PLEKHH2Q8IVE3 1493 aa20.43■□□□□ 0.86
PXN-201ENST00000228307 TMF1P82094 1093 aa20.42■□□□□ 0.86
PXN-201ENST00000228307 PLEKHG5O94827 1062 aa20.41■□□□□ 0.86
PXN-201ENST00000228307 USP35Q9P2H5 1018 aa20.41■□□□□ 0.86
PXN-201ENST00000228307 PANK3Q9H999 370 aa20.4■□□□□ 0.86
PXN-201ENST00000228307 TCOF1Q13428 1488 aaKnown RBP20.4■□□□□ 0.86
PXN-201ENST00000228307 TMEM132EQ6IEE7 984 aa20.39■□□□□ 0.86
PXN-201ENST00000228307 FRAT1Q92837 279 aaPredicted RBP20.39■□□□□ 0.86
PXN-201ENST00000228307 GSE1Q14687 1217 aa20.39■□□□□ 0.85
PXN-201ENST00000228307 PDE3BQ13370 1112 aa20.38■□□□□ 0.85
PXN-201ENST00000228307 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
PXN-201ENST00000228307 BRPF3Q9ULD4 1205 aa20.38■□□□□ 0.85
PXN-201ENST00000228307 CFAP70Q5T0N1 1121 aa20.38■□□□□ 0.85
PXN-201ENST00000228307 CCDC141Q6ZP82 1450 aa20.37■□□□□ 0.85
PXN-201ENST00000228307 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
PXN-201ENST00000228307 BACH2Q9BYV9 841 aa20.36■□□□□ 0.85
PXN-201ENST00000228307 SPRYD3Q8NCJ5 442 aa20.36■□□□□ 0.85
PXN-201ENST00000228307 BECN1Q14457 450 aa20.35■□□□□ 0.85
PXN-201ENST00000228307 SYCP2Q9BX26 1530 aa20.35■□□□□ 0.85
PXN-201ENST00000228307 MS4A1P11836 297 aa20.34■□□□□ 0.85
PXN-201ENST00000228307 NFKBIBQ15653 356 aa20.34■□□□□ 0.85
PXN-201ENST00000228307 RPRD2Q5VT52 1461 aaKnown RBP20.33■□□□□ 0.85
PXN-201ENST00000228307 CCDC146Q8IYE0 955 aa20.33■□□□□ 0.84
PXN-201ENST00000228307 TRAPPC8Q9Y2L5 1435 aa20.33■□□□□ 0.84
PXN-201ENST00000228307 PRKCSHP14314 528 aaPredicted RBP20.3■□□□□ 0.84
PXN-201ENST00000228307 PZPP20742 1482 aa20.28■□□□□ 0.84
PXN-201ENST00000228307 HSP90AA1P07900 732 aaKnown RBP20.28■□□□□ 0.84
PXN-201ENST00000228307 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
PXN-201ENST00000228307 POGKQ9P215 609 aa20.26■□□□□ 0.83
PXN-201ENST00000228307 FAM161AQ3B820 660 aa20.26■□□□□ 0.83
PXN-201ENST00000228307 NUTM2FA1L443 756 aa20.25■□□□□ 0.83
PXN-201ENST00000228307 SRPK2P78362 688 aaKnown RBP20.25■□□□□ 0.83
PXN-201ENST00000228307 GZF1Q9H116 711 aaPredicted RBP20.25■□□□□ 0.83
PXN-201ENST00000228307 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
PXN-201ENST00000228307 CHD1O14646 1710 aa20.25■□□□□ 0.83
PXN-201ENST00000228307 DNMT1P26358 1616 aaKnown RBP20.24■□□□□ 0.83
PXN-201ENST00000228307 CENPQQ7L2Z9 268 aaPredicted RBP20.23■□□□□ 0.83
PXN-201ENST00000228307 DENND4BO75064 1496 aaPredicted RBP20.22■□□□□ 0.83
PXN-201ENST00000228307 FRAT2O75474 233 aaPredicted RBP20.21■□□□□ 0.83
PXN-201ENST00000228307 ADAMTS8Q9UP79 889 aa20.21■□□□□ 0.83
PXN-201ENST00000228307 SOX12O15370 315 aa20.2■□□□□ 0.82
PXN-201ENST00000228307 FANCAO15360 1455 aa20.2■□□□□ 0.82
PXN-201ENST00000228307 C20orf194Q5TEA3 1177 aa20.2■□□□□ 0.82
PXN-201ENST00000228307 NAP1L5Q96NT1 182 aaPredicted RBP20.2■□□□□ 0.82
PXN-201ENST00000228307 ASXL2Q76L83 1435 aa20.2■□□□□ 0.82
PXN-201ENST00000228307 ADGRL1O94910 1474 aa20.19■□□□□ 0.82
PXN-201ENST00000228307 PLCH2O75038 1416 aa20.19■□□□□ 0.82
PXN-201ENST00000228307 ABCA8O94911 1581 aa20.19■□□□□ 0.82
PXN-201ENST00000228307 CD109Q6YHK3 1445 aa20.18■□□□□ 0.82
PXN-201ENST00000228307 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
PXN-201ENST00000228307 CDCA8Q53HL2 280 aa20.17■□□□□ 0.82
PXN-201ENST00000228307 CLUAP1Q96AJ1 413 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms