RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 HS6ST3Q8IZP7 471 aa9.15□□□□□ -0.94
AFP-201ENST00000226359 SLAIN1Q8ND83 568 aa9.15□□□□□ -0.95
AFP-201ENST00000226359 CHRM1P11229 460 aaPredicted RBP9.14□□□□□ -0.95
AFP-201ENST00000226359 NBR1Q14596 966 aa9.13□□□□□ -0.95
AFP-201ENST00000226359 GTF3C3Q9Y5Q9 886 aa9.13□□□□□ -0.95
AFP-201ENST00000226359 KDM6BO15054 1643 aa9.13□□□□□ -0.95
AFP-201ENST00000226359 RAPGEF6Q8TEU7 1601 aa9.13□□□□□ -0.95
AFP-201ENST00000226359 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
AFP-201ENST00000226359 FMN1Q68DA7 1419 aa9.12□□□□□ -0.95
AFP-201ENST00000226359 KCNH8Q96L42 1107 aa9.12□□□□□ -0.95
AFP-201ENST00000226359 STK25O00506 426 aa9.11□□□□□ -0.95
AFP-201ENST00000226359 SNPHO15079 494 aa9.11□□□□□ -0.95
AFP-201ENST00000226359 CCDC61Q9Y6R9 512 aa9.11□□□□□ -0.95
AFP-201ENST00000226359 TIE1P35590 1138 aa9.11□□□□□ -0.95
AFP-201ENST00000226359 CD109Q6YHK3 1445 aa9.1□□□□□ -0.95
AFP-201ENST00000226359 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
AFP-201ENST00000226359 BMP2KQ9NSY1 1161 aaPredicted RBP9.1□□□□□ -0.95
AFP-201ENST00000226359 ATP10BO94823 1461 aa9.1□□□□□ -0.95
AFP-201ENST00000226359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.09□□□□□ -0.95
AFP-201ENST00000226359 NKX1-1Q15270 411 aaPredicted RBP9.09□□□□□ -0.95
AFP-201ENST00000226359 ZFP91Q96JP5 570 aaPredicted RBP9.09□□□□□ -0.95
AFP-201ENST00000226359 ATP1B4Q9UN42 357 aaPredicted RBP9.09□□□□□ -0.95
AFP-201ENST00000226359 TSPOAP1O95153 1857 aa9.09□□□□□ -0.95
AFP-201ENST00000226359 PLEKHD1A6NEE1 506 aa9.09□□□□□ -0.95
AFP-201ENST00000226359 CDK11AQ9UQ88 783 aaPredicted RBP9.09□□□□□ -0.95
AFP-201ENST00000226359 IER5LQ5T953 404 aa9.08□□□□□ -0.96
AFP-201ENST00000226359 NUP153P49790 1475 aaKnown RBP9.08□□□□□ -0.96
AFP-201ENST00000226359 MAP3K4Q9Y6R4 1608 aa9.08□□□□□ -0.96
AFP-201ENST00000226359 MAGI3Q5TCQ9 1506 aa9.08□□□□□ -0.96
AFP-201ENST00000226359 CFAP43Q8NDM7 1665 aa9.08□□□□□ -0.96
AFP-201ENST00000226359 BCL11BQ9C0K0 894 aaPredicted RBP9.07□□□□□ -0.96
AFP-201ENST00000226359 HECW1Q76N89 1606 aa9.07□□□□□ -0.96
AFP-201ENST00000226359 ARHGAP35Q9NRY4 1499 aa9.06□□□□□ -0.96
AFP-201ENST00000226359 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
AFP-201ENST00000226359 PCDHB8Q9UN66 801 aa9.06□□□□□ -0.96
AFP-201ENST00000226359 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
AFP-201ENST00000226359 PHLDB1Q86UU1 1377 aa9.06□□□□□ -0.96
AFP-201ENST00000226359 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
AFP-201ENST00000226359 COLQQ9Y215 455 aaPredicted RBP9.05□□□□□ -0.96
AFP-201ENST00000226359 CLIP1P30622 1438 aa9.04□□□□□ -0.96
AFP-201ENST00000226359 ARXQ96QS3 562 aa9.03□□□□□ -0.96
AFP-201ENST00000226359 PPRC1Q5VV67 1664 aaKnown RBP9.03□□□□□ -0.96
AFP-201ENST00000226359 ABCA9Q8IUA7 1624 aa9.02□□□□□ -0.97
AFP-201ENST00000226359 ZNF467Q7Z7K2 595 aaPredicted RBP9.02□□□□□ -0.97
AFP-201ENST00000226359 CCDC18Q5T9S5 1454 aa9.02□□□□□ -0.97
AFP-201ENST00000226359 NEO1Q92859 1461 aa9.02□□□□□ -0.97
AFP-201ENST00000226359 SGIP1Q9BQI5 828 aa9.01□□□□□ -0.97
AFP-201ENST00000226359 CDK13Q14004 1512 aaKnown RBP9.01□□□□□ -0.97
AFP-201ENST00000226359 MAP3K13O43283 966 aa9.01□□□□□ -0.97
AFP-201ENST00000226359 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
AFP-201ENST00000226359 CFAP74Q9C0B2 1584 aa9.01□□□□□ -0.97
AFP-201ENST00000226359 CASKIN1Q8WXD9 1431 aa9□□□□□ -0.97
AFP-201ENST00000226359 IFNL1Q8IU54 200 aa8.99□□□□□ -0.97
AFP-201ENST00000226359 FYCO1Q9BQS8 1478 aa8.99□□□□□ -0.97
AFP-201ENST00000226359 GTPBP6O43824 516 aaPredicted RBP8.99□□□□□ -0.97
AFP-201ENST00000226359 TROQ12816 1431 aaPredicted RBP8.98□□□□□ -0.97
AFP-201ENST00000226359 ARAP3Q8WWN8 1544 aa8.98□□□□□ -0.97
AFP-201ENST00000226359 KIF14Q15058 1648 aa8.98□□□□□ -0.97
AFP-201ENST00000226359 PCF11O94913 1555 aaKnown RBP8.98□□□□□ -0.97
AFP-201ENST00000226359 PDAP1Q13442 181 aaKnown RBP8.97□□□□□ -0.97
AFP-201ENST00000226359 FANCAO15360 1455 aa8.97□□□□□ -0.97
AFP-201ENST00000226359 DENND4BO75064 1496 aaPredicted RBP8.97□□□□□ -0.97
AFP-201ENST00000226359 CEP162Q5TB80 1403 aa8.96□□□□□ -0.98
AFP-201ENST00000226359 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.98
AFP-201ENST00000226359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.96□□□□□ -0.98
AFP-201ENST00000226359 PSEN1P49768 467 aa8.95□□□□□ -0.98
AFP-201ENST00000226359 TMEM132AQ24JP5 1023 aa8.95□□□□□ -0.98
AFP-201ENST00000226359 EFCAB2Q5VUJ9 269 aa8.95□□□□□ -0.98
AFP-201ENST00000226359 AKNAQ7Z591 1439 aa8.95□□□□□ -0.98
AFP-201ENST00000226359 TTC37Q6PGP7 1564 aa8.94□□□□□ -0.98
AFP-201ENST00000226359 TTLL13PA6NNM8 815 aa8.94□□□□□ -0.98
AFP-201ENST00000226359 MARVELD3Q96A59 401 aa8.94□□□□□ -0.98
AFP-201ENST00000226359 PLCH2O75038 1416 aa8.94□□□□□ -0.98
AFP-201ENST00000226359 ARHGAP5Q13017 1502 aa8.93□□□□□ -0.98
AFP-201ENST00000226359 ADGRL1O94910 1474 aa8.93□□□□□ -0.98
AFP-201ENST00000226359 MTUS2Q5JR59 1369 aa8.93□□□□□ -0.98
AFP-201ENST00000226359 ARID4BQ4LE39 1312 aaPredicted RBP8.92□□□□□ -0.98
AFP-201ENST00000226359 RAPGEF3O95398 923 aa8.92□□□□□ -0.98
AFP-201ENST00000226359 MYT1LQ9UL68 1186 aa8.92□□□□□ -0.98
AFP-201ENST00000226359 EMP3P54852 163 aa8.91□□□□□ -0.98
AFP-201ENST00000226359 TRPC6Q9Y210 931 aa8.91□□□□□ -0.98
AFP-201ENST00000226359 SCAPERQ9BY12 1400 aa8.91□□□□□ -0.98
AFP-201ENST00000226359 MYO5CQ9NQX4 1742 aa8.9□□□□□ -0.98
AFP-201ENST00000226359 PLCG2P16885 1265 aa8.9□□□□□ -0.98
AFP-201ENST00000226359 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
AFP-201ENST00000226359 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
AFP-201ENST00000226359 POGZQ7Z3K3 1410 aa8.9□□□□□ -0.98
AFP-201ENST00000226359 MAGI2Q86UL8 1455 aa8.9□□□□□ -0.99
AFP-201ENST00000226359 KDM4FA0A1W2PPD8 638 aa8.9□□□□□ -0.99
AFP-201ENST00000226359 ARHGEF40Q8TER5 1519 aa8.89□□□□□ -0.99
AFP-201ENST00000226359 TRIM35Q9UPQ4 493 aa8.89□□□□□ -0.99
AFP-201ENST00000226359 ZFYVE16Q7Z3T8 1539 aa8.89□□□□□ -0.99
AFP-201ENST00000226359 CCNB3Q8WWL7 1395 aa8.89□□□□□ -0.99
AFP-201ENST00000226359 ZNF518AQ6AHZ1 1483 aa8.89□□□□□ -0.99
AFP-201ENST00000226359 ZMYM4Q5VZL5 1548 aa8.88□□□□□ -0.99
AFP-201ENST00000226359 EHBP1L1Q8N3D4 1523 aa8.88□□□□□ -0.99
AFP-201ENST00000226359 C14orf37Q86TY3 774 aa8.88□□□□□ -0.99
AFP-201ENST00000226359 CABP2Q9NPB3 220 aa8.88□□□□□ -0.99
AFP-201ENST00000226359 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
AFP-201ENST00000226359 MFRPQ9BY79 579 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms