RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.32
LAMB1-201ENST00000222399 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.31
LAMB1-201ENST00000222399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
LAMB1-201ENST00000222399 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
LAMB1-201ENST00000222399 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
LAMB1-201ENST00000222399 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
LAMB1-201ENST00000222399 CLSTN1O94985 981 aa17■□□□□ 0.31
LAMB1-201ENST00000222399 PTPRGP23470 1445 aa17■□□□□ 0.31
LAMB1-201ENST00000222399 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
LAMB1-201ENST00000222399 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
LAMB1-201ENST00000222399 SLKQ9H2G2 1235 aaPredicted RBP16.99■□□□□ 0.31
LAMB1-201ENST00000222399 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
LAMB1-201ENST00000222399 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
LAMB1-201ENST00000222399 PANK3Q9H999 370 aa16.99■□□□□ 0.31
LAMB1-201ENST00000222399 CCDC9Q9Y3X0 531 aaKnown RBP16.98■□□□□ 0.31
LAMB1-201ENST00000222399 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
LAMB1-201ENST00000222399 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
LAMB1-201ENST00000222399 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.31
LAMB1-201ENST00000222399 CSPP1Q1MSJ5 1256 aa16.96■□□□□ 0.31
LAMB1-201ENST00000222399 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
LAMB1-201ENST00000222399 TPM4P67936 248 aa16.95■□□□□ 0.3
LAMB1-201ENST00000222399 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
LAMB1-201ENST00000222399 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
LAMB1-201ENST00000222399 COG3Q96JB2 828 aa16.95■□□□□ 0.3
LAMB1-201ENST00000222399 IPO9Q96P70 1041 aaKnown RBP16.94■□□□□ 0.3
LAMB1-201ENST00000222399 USP47Q96K76 1375 aa16.93■□□□□ 0.3
LAMB1-201ENST00000222399 E9PSI1 815 aa16.92■□□□□ 0.3
LAMB1-201ENST00000222399 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
LAMB1-201ENST00000222399 RUSC2Q8N2Y8 1516 aa16.92■□□□□ 0.3
LAMB1-201ENST00000222399 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
LAMB1-201ENST00000222399 ST18O60284 1047 aa16.91■□□□□ 0.3
LAMB1-201ENST00000222399 RRP7AQ9Y3A4 280 aaKnown RBP16.91■□□□□ 0.3
LAMB1-201ENST00000222399 CENPQQ7L2Z9 268 aaPredicted RBP16.9■□□□□ 0.3
LAMB1-201ENST00000222399 PRKRIP1Q9H875 184 aaPredicted RBP16.89■□□□□ 0.29
LAMB1-201ENST00000222399 MYOM3Q5VTT5 1437 aa16.89■□□□□ 0.29
LAMB1-201ENST00000222399 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
LAMB1-201ENST00000222399 C1orf141Q5JVX7 400 aa16.89■□□□□ 0.29
LAMB1-201ENST00000222399 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
LAMB1-201ENST00000222399 ZKSCAN2Q63HK3 967 aa16.88■□□□□ 0.29
LAMB1-201ENST00000222399 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
LAMB1-201ENST00000222399 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
LAMB1-201ENST00000222399 CUX1P39880 1505 aa16.87■□□□□ 0.29
LAMB1-201ENST00000222399 G3V3G9 751 aa16.86■□□□□ 0.29
LAMB1-201ENST00000222399 DCAF8Q5TAQ9 597 aa16.86■□□□□ 0.29
LAMB1-201ENST00000222399 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
LAMB1-201ENST00000222399 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
LAMB1-201ENST00000222399 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
LAMB1-201ENST00000222399 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
LAMB1-201ENST00000222399 PHF14O94880 888 aa16.84■□□□□ 0.29
LAMB1-201ENST00000222399 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
LAMB1-201ENST00000222399 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
LAMB1-201ENST00000222399 MINK1Q8N4C8 1332 aaPredicted RBP16.84■□□□□ 0.29
LAMB1-201ENST00000222399 RRP1P56182 461 aaKnown RBP16.84■□□□□ 0.29
LAMB1-201ENST00000222399 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.29
LAMB1-201ENST00000222399 FRAT2O75474 233 aaPredicted RBP16.83■□□□□ 0.28
LAMB1-201ENST00000222399 STAC3Q96MF2 364 aa16.82■□□□□ 0.28
LAMB1-201ENST00000222399 TEFQ10587 303 aa16.82■□□□□ 0.28
LAMB1-201ENST00000222399 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
LAMB1-201ENST00000222399 RASSF8Q8NHQ8 419 aa16.82■□□□□ 0.28
LAMB1-201ENST00000222399 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
LAMB1-201ENST00000222399 ANKRD45Q5TZF3 282 aa16.82■□□□□ 0.28
LAMB1-201ENST00000222399 TOMM22Q9NS69 142 aa16.82■□□□□ 0.28
LAMB1-201ENST00000222399 IGF1RP08069 1367 aa16.82■□□□□ 0.28
LAMB1-201ENST00000222399 ELL2O00472 640 aaPredicted RBP16.81■□□□□ 0.28
LAMB1-201ENST00000222399 DIAPH1O60610 1272 aaKnown RBP16.81■□□□□ 0.28
LAMB1-201ENST00000222399 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
LAMB1-201ENST00000222399 DDX11L8A8MPP1 907 aa16.81■□□□□ 0.28
LAMB1-201ENST00000222399 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
LAMB1-201ENST00000222399 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
LAMB1-201ENST00000222399 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
LAMB1-201ENST00000222399 RILPL2Q969X0 211 aa16.8■□□□□ 0.28
LAMB1-201ENST00000222399 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
LAMB1-201ENST00000222399 EVA1CP58658 441 aa16.79■□□□□ 0.28
LAMB1-201ENST00000222399 TTC5Q8N0Z6 440 aa16.79■□□□□ 0.28
LAMB1-201ENST00000222399 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
LAMB1-201ENST00000222399 DDX19BQ9UMR2 479 aa16.78■□□□□ 0.28
LAMB1-201ENST00000222399 APAF1O14727 1248 aa16.78■□□□□ 0.28
LAMB1-201ENST00000222399 LRRFIP1Q32MZ4 808 aaKnown RBP16.78■□□□□ 0.28
LAMB1-201ENST00000222399 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
LAMB1-201ENST00000222399 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.28
LAMB1-201ENST00000222399 PLIN1O60240 522 aa16.77■□□□□ 0.28
LAMB1-201ENST00000222399 EXOC6Q8TAG9 804 aa16.77■□□□□ 0.27
LAMB1-201ENST00000222399 NOC3LQ8WTT2 800 aaKnown RBP16.76■□□□□ 0.27
LAMB1-201ENST00000222399 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
LAMB1-201ENST00000222399 PDE4AP27815 886 aa16.76■□□□□ 0.27
LAMB1-201ENST00000222399 API5Q9BZZ5 524 aaKnown RBP16.76■□□□□ 0.27
LAMB1-201ENST00000222399 ROCK1Q13464 1354 aa16.76■□□□□ 0.27
LAMB1-201ENST00000222399 H3BQV1 296 aa16.76■□□□□ 0.27
LAMB1-201ENST00000222399 IFFO2Q5TF58 517 aa16.76■□□□□ 0.27
LAMB1-201ENST00000222399 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
LAMB1-201ENST00000222399 COG6Q9Y2V7 657 aa16.75■□□□□ 0.27
LAMB1-201ENST00000222399 RUFY2Q8WXA3 655 aa16.74■□□□□ 0.27
LAMB1-201ENST00000222399 RIPK4P57078 832 aa16.74■□□□□ 0.27
LAMB1-201ENST00000222399 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
LAMB1-201ENST00000222399 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
LAMB1-201ENST00000222399 RUNDC1Q96C34 613 aa16.74■□□□□ 0.27
LAMB1-201ENST00000222399 C9orf78Q9NZ63 289 aaPredicted RBP16.74■□□□□ 0.27
LAMB1-201ENST00000222399 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
LAMB1-201ENST00000222399 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
LAMB1-201ENST00000222399 MARCH6O60337 910 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms