RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 POLR1AO95602 1720 aaPredicted RBP24.72■■□□□ 1.55
GCDH-201ENST00000222214 CD109Q6YHK3 1445 aa24.72■■□□□ 1.55
GCDH-201ENST00000222214 ZNF518AQ6AHZ1 1483 aa24.72■■□□□ 1.55
GCDH-201ENST00000222214 RALGAPBQ86X10 1494 aa24.72■■□□□ 1.55
GCDH-201ENST00000222214 WASHC2AQ641Q2 1341 aa24.69■■□□□ 1.54
GCDH-201ENST00000222214 PLA2R1Q13018 1463 aa24.69■■□□□ 1.54
GCDH-201ENST00000222214 SCAF1Q9H7N4 1312 aaKnown RBP24.69■■□□□ 1.54
GCDH-201ENST00000222214 CCER2I3L3R5 266 aa24.69■■□□□ 1.54
GCDH-201ENST00000222214 DHX29Q7Z478 1369 aaKnown RBP24.66■■□□□ 1.54
GCDH-201ENST00000222214 KANK1Q14678 1352 aa24.65■■□□□ 1.54
GCDH-201ENST00000222214 CCDC7Q96M83 1385 aa24.65■■□□□ 1.54
GCDH-201ENST00000222214 KIDINS220Q9ULH0 1771 aa24.63■■□□□ 1.53
GCDH-201ENST00000222214 KDM5CP41229 1560 aa24.63■■□□□ 1.53
GCDH-201ENST00000222214 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
GCDH-201ENST00000222214 TET3O43151 1660 aa24.63■■□□□ 1.53
GCDH-201ENST00000222214 NEO1Q92859 1461 aa24.63■■□□□ 1.53
GCDH-201ENST00000222214 USP47Q96K76 1375 aa24.62■■□□□ 1.53
GCDH-201ENST00000222214 POGZQ7Z3K3 1410 aa24.61■■□□□ 1.53
GCDH-201ENST00000222214 PRDM15P57071 1507 aaPredicted RBP24.61■■□□□ 1.53
GCDH-201ENST00000222214 E9PCH4 1651 aa24.61■■□□□ 1.53
GCDH-201ENST00000222214 ZNF326Q5BKZ1 582 aaKnown RBP24.61■■□□□ 1.53
GCDH-201ENST00000222214 DCAF11Q8TEB1 546 aa24.61■■□□□ 1.53
GCDH-201ENST00000222214 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
GCDH-201ENST00000222214 MYT1LQ9UL68 1186 aa24.6■■□□□ 1.53
GCDH-201ENST00000222214 ARID4BQ4LE39 1312 aaPredicted RBP24.59■■□□□ 1.53
GCDH-201ENST00000222214 MLH3Q9UHC1 1453 aa24.59■■□□□ 1.53
GCDH-201ENST00000222214 TRPM2O94759 1503 aa24.58■■□□□ 1.53
GCDH-201ENST00000222214 PRAG1Q86YV5 1406 aa24.57■■□□□ 1.52
GCDH-201ENST00000222214 SPHKAPQ2M3C7 1700 aa24.56■■□□□ 1.52
GCDH-201ENST00000222214 PTPRTO14522 1441 aa24.55■■□□□ 1.52
GCDH-201ENST00000222214 A2MP01023 1474 aa24.55■■□□□ 1.52
GCDH-201ENST00000222214 HECW2Q9P2P5 1572 aa24.55■■□□□ 1.52
GCDH-201ENST00000222214 TRPM1Q7Z4N2 1603 aa24.55■■□□□ 1.52
GCDH-201ENST00000222214 RIMBP3CA6NJZ7 1639 aa24.54■■□□□ 1.52
GCDH-201ENST00000222214 RIMBP3BA6NNM3 1639 aa24.54■■□□□ 1.52
GCDH-201ENST00000222214 RIMBP3Q9UFD9 1639 aa24.54■■□□□ 1.52
GCDH-201ENST00000222214 KIF3BO15066 747 aa24.54■■□□□ 1.52
GCDH-201ENST00000222214 CARD11Q9BXL7 1154 aa24.54■■□□□ 1.52
GCDH-201ENST00000222214 KDM2AQ9Y2K7 1162 aa24.54■■□□□ 1.52
GCDH-201ENST00000222214 GLI2P10070 1586 aa24.54■■□□□ 1.52
GCDH-201ENST00000222214 KIF7Q2M1P5 1343 aa24.53■■□□□ 1.52
GCDH-201ENST00000222214 MROH1Q8NDA8 1641 aa24.53■■□□□ 1.52
GCDH-201ENST00000222214 MAP3K4Q9Y6R4 1608 aa24.53■■□□□ 1.52
GCDH-201ENST00000222214 C11orf95C9JLR9 678 aaPredicted RBP24.53■■□□□ 1.52
GCDH-201ENST00000222214 LAMC1P11047 1609 aa24.52■■□□□ 1.52
GCDH-201ENST00000222214 RNF17Q9BXT8 1623 aaKnown RBP24.52■■□□□ 1.52
GCDH-201ENST00000222214 STAC3Q96MF2 364 aa24.51■■□□□ 1.51
GCDH-201ENST00000222214 GTF3C3Q9Y5Q9 886 aa24.51■■□□□ 1.51
GCDH-201ENST00000222214 CEP152O94986 1710 aa24.51■■□□□ 1.51
GCDH-201ENST00000222214 ROCK2O75116 1388 aaKnown RBP24.5■■□□□ 1.51
GCDH-201ENST00000222214 BCORL1Q5H9F3 1711 aa24.5■■□□□ 1.51
GCDH-201ENST00000222214 NEURL4Q96JN8 1562 aa24.49■■□□□ 1.51
GCDH-201ENST00000222214 LMTK2Q8IWU2 1503 aa24.49■■□□□ 1.51
GCDH-201ENST00000222214 GPRASP1Q5JY77 1395 aa24.48■■□□□ 1.51
GCDH-201ENST00000222214 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
GCDH-201ENST00000222214 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
GCDH-201ENST00000222214 EFCAB6Q5THR3 1501 aa24.46■■□□□ 1.51
GCDH-201ENST00000222214 CLTCL1P53675 1640 aa24.43■■□□□ 1.5
GCDH-201ENST00000222214 FRMPD1Q5SYB0 1578 aa24.42■■□□□ 1.5
GCDH-201ENST00000222214 ABCA6Q8N139 1617 aa24.41■■□□□ 1.5
GCDH-201ENST00000222214 RICTORQ6R327 1708 aa24.4■■□□□ 1.5
GCDH-201ENST00000222214 PPRC1Q5VV67 1664 aaKnown RBP24.38■■□□□ 1.49
GCDH-201ENST00000222214 ST20-MTHFSA0A0A6YYL1 179 aa24.36■■□□□ 1.49
GCDH-201ENST00000222214 MADDQ8WXG6 1647 aa24.36■■□□□ 1.49
GCDH-201ENST00000222214 DIP2BQ9P265 1576 aa24.35■■□□□ 1.49
GCDH-201ENST00000222214 PRKRIP1Q9H875 184 aaPredicted RBP24.35■■□□□ 1.49
GCDH-201ENST00000222214 DIP2CQ9Y2E4 1556 aa24.35■■□□□ 1.49
GCDH-201ENST00000222214 KIF1BO60333 1816 aa24.33■■□□□ 1.49
GCDH-201ENST00000222214 RAPGEF3O95398 923 aa24.31■■□□□ 1.48
GCDH-201ENST00000222214 NBPF1Q3BBV0 1214 aa24.31■■□□□ 1.48
GCDH-201ENST00000222214 KIAA1210Q9ULL0 1709 aa24.3■■□□□ 1.48
GCDH-201ENST00000222214 ZMYM4Q5VZL5 1548 aa24.29■■□□□ 1.48
GCDH-201ENST00000222214 ABCC3O15438 1527 aa24.28■■□□□ 1.48
GCDH-201ENST00000222214 MYOM2P54296 1465 aa24.27■■□□□ 1.48
GCDH-201ENST00000222214 ZC3H13Q5T200 1668 aaKnown RBP24.27■■□□□ 1.48
GCDH-201ENST00000222214 FAM69CQ0P6D2 419 aa24.26■■□□□ 1.47
GCDH-201ENST00000222214 NPATQ14207 1427 aa24.25■■□□□ 1.47
GCDH-201ENST00000222214 GGT6Q6P531 493 aa24.25■■□□□ 1.47
GCDH-201ENST00000222214 POLR3GLQ9BT43 218 aa24.24■■□□□ 1.47
GCDH-201ENST00000222214 CAMSAP1Q5T5Y3 1602 aa24.24■■□□□ 1.47
GCDH-201ENST00000222214 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
GCDH-201ENST00000222214 COL17A1Q9UMD9 1497 aaPredicted RBP24.24■■□□□ 1.47
GCDH-201ENST00000222214 WASHC2CQ9Y4E1 1318 aa24.23■■□□□ 1.47
GCDH-201ENST00000222214 IFT172Q9UG01 1749 aa24.23■■□□□ 1.47
GCDH-201ENST00000222214 ADGRB3O60242 1522 aa24.22■■□□□ 1.47
GCDH-201ENST00000222214 KTN1Q86UP2 1357 aaKnown RBP24.21■■□□□ 1.47
GCDH-201ENST00000222214 UGGT1Q9NYU2 1555 aa24.21■■□□□ 1.47
GCDH-201ENST00000222214 ARHGAP31Q2M1Z3 1444 aa24.2■■□□□ 1.46
GCDH-201ENST00000222214 SCAF11Q99590 1463 aaKnown RBP24.19■■□□□ 1.46
GCDH-201ENST00000222214 TESK2Q96S53 571 aa24.19■■□□□ 1.46
GCDH-201ENST00000222214 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
GCDH-201ENST00000222214 TMF1P82094 1093 aa24.18■■□□□ 1.46
GCDH-201ENST00000222214 MROH2AA6NES4 1674 aa24.17■■□□□ 1.46
GCDH-201ENST00000222214 REREQ9P2R6 1566 aa24.17■■□□□ 1.46
GCDH-201ENST00000222214 NOS1P29475 1434 aa24.16■■□□□ 1.46
GCDH-201ENST00000222214 EIF3AQ14152 1382 aaKnown RBP24.16■■□□□ 1.46
GCDH-201ENST00000222214 NRXN1Q9ULB1 1477 aa24.16■■□□□ 1.46
GCDH-201ENST00000222214 MRS2Q9HD23 443 aa24.16■■□□□ 1.46
GCDH-201ENST00000222214 TSPOAP1O95153 1857 aa24.14■■□□□ 1.45
GCDH-201ENST00000222214 SLC24A1O60721 1099 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms