RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
TRMT1-201ENST00000221504 DUOX2Q9NRD8 1548 aa20.51■□□□□ 0.87
TRMT1-201ENST00000221504 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
TRMT1-201ENST00000221504 DCAF11Q8TEB1 546 aa20.51■□□□□ 0.87
TRMT1-201ENST00000221504 KDM2AQ9Y2K7 1162 aa20.5■□□□□ 0.87
TRMT1-201ENST00000221504 ABCC1P33527 1531 aa20.48■□□□□ 0.87
TRMT1-201ENST00000221504 PLA2R1Q13018 1463 aa20.48■□□□□ 0.87
TRMT1-201ENST00000221504 MAGI2Q86UL8 1455 aa20.48■□□□□ 0.87
TRMT1-201ENST00000221504 ERBINQ96RT1 1412 aa20.48■□□□□ 0.87
TRMT1-201ENST00000221504 ROCK2O75116 1388 aaKnown RBP20.48■□□□□ 0.87
TRMT1-201ENST00000221504 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
TRMT1-201ENST00000221504 FAM9BQ8IZU0 186 aa20.46■□□□□ 0.87
TRMT1-201ENST00000221504 POLR3GLQ9BT43 218 aa20.46■□□□□ 0.87
TRMT1-201ENST00000221504 MYT1Q01538 1121 aa20.45■□□□□ 0.86
TRMT1-201ENST00000221504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.862e-7■■■■□ 26.2
TRMT1-201ENST00000221504 TSHZ2Q9NRE2 1034 aa20.45■□□□□ 0.86
TRMT1-201ENST00000221504 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
TRMT1-201ENST00000221504 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
TRMT1-201ENST00000221504 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
TRMT1-201ENST00000221504 ZBED9Q6R2W3 1325 aa20.42■□□□□ 0.86
TRMT1-201ENST00000221504 ARAP3Q8WWN8 1544 aa20.41■□□□□ 0.86
TRMT1-201ENST00000221504 ATP10AO60312 1499 aa20.41■□□□□ 0.86
TRMT1-201ENST00000221504 A2MP01023 1474 aa20.41■□□□□ 0.86
TRMT1-201ENST00000221504 TRAPPC8Q9Y2L5 1435 aa20.41■□□□□ 0.86
TRMT1-201ENST00000221504 RIMBP3CA6NJZ7 1639 aa20.41■□□□□ 0.86
TRMT1-201ENST00000221504 RIMBP3BA6NNM3 1639 aa20.41■□□□□ 0.86
TRMT1-201ENST00000221504 RIMBP3Q9UFD9 1639 aa20.41■□□□□ 0.86
TRMT1-201ENST00000221504 E9PCH4 1651 aa20.38■□□□□ 0.85
TRMT1-201ENST00000221504 RGL3Q3MIN7 710 aa20.37■□□□□ 0.85
TRMT1-201ENST00000221504 GPRASP1Q5JY77 1395 aa20.37■□□□□ 0.85
TRMT1-201ENST00000221504 LAMC1P11047 1609 aa20.37■□□□□ 0.85
TRMT1-201ENST00000221504 ZFYVE16Q7Z3T8 1539 aa20.35■□□□□ 0.85
TRMT1-201ENST00000221504 EIF2AK4Q9P2K8 1649 aaKnown RBP20.35■□□□□ 0.85
TRMT1-201ENST00000221504 RTEL1-TNFRSF6BF6WH68 1400 aa20.35■□□□□ 0.85
TRMT1-201ENST00000221504 WDR7Q9Y4E6 1490 aa20.34■□□□□ 0.85
TRMT1-201ENST00000221504 SPAG9O60271 1321 aaKnown RBP20.33■□□□□ 0.85
TRMT1-201ENST00000221504 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
TRMT1-201ENST00000221504 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
TRMT1-201ENST00000221504 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
TRMT1-201ENST00000221504 KTN1Q86UP2 1357 aaKnown RBP20.3■□□□□ 0.84
TRMT1-201ENST00000221504 ABCA9Q8IUA7 1624 aa20.3■□□□□ 0.84
TRMT1-201ENST00000221504 AFAP1Q8N556 730 aa20.29■□□□□ 0.84
TRMT1-201ENST00000221504 ERICH6BQ5W0A0 696 aa20.28■□□□□ 0.84
TRMT1-201ENST00000221504 DEPDC5O75140 1603 aa20.28■□□□□ 0.84
TRMT1-201ENST00000221504 IRX6P78412 446 aaPredicted RBP20.28■□□□□ 0.84
TRMT1-201ENST00000221504 FANCAO15360 1455 aa20.27■□□□□ 0.84
TRMT1-201ENST00000221504 INO80Q9ULG1 1556 aaPredicted RBP20.27■□□□□ 0.84
TRMT1-201ENST00000221504 COL17A1Q9UMD9 1497 aaPredicted RBP20.26■□□□□ 0.83
TRMT1-201ENST00000221504 RNF17Q9BXT8 1623 aaKnown RBP20.26■□□□□ 0.83
TRMT1-201ENST00000221504 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
TRMT1-201ENST00000221504 TRPM2O94759 1503 aa20.25■□□□□ 0.83
TRMT1-201ENST00000221504 ATP7AQ04656 1500 aa20.25■□□□□ 0.83
TRMT1-201ENST00000221504 RALBP1Q15311 655 aa20.25■□□□□ 0.83
TRMT1-201ENST00000221504 TMC1Q8TDI8 760 aa20.25■□□□□ 0.83
TRMT1-201ENST00000221504 MYBBP1AQ9BQG0 1328 aaKnown RBP20.24■□□□□ 0.83
TRMT1-201ENST00000221504 BRD4O60885 1362 aaPredicted RBP20.24■□□□□ 0.83
TRMT1-201ENST00000221504 SPHKAPQ2M3C7 1700 aa20.23■□□□□ 0.83
TRMT1-201ENST00000221504 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
TRMT1-201ENST00000221504 TESK2Q96S53 571 aa20.22■□□□□ 0.83
TRMT1-201ENST00000221504 TET3O43151 1660 aa20.22■□□□□ 0.83
TRMT1-201ENST00000221504 CEP152O94986 1710 aa20.22■□□□□ 0.83
TRMT1-201ENST00000221504 PTPRTO14522 1441 aa20.21■□□□□ 0.83
TRMT1-201ENST00000221504 MADDQ8WXG6 1647 aa20.21■□□□□ 0.83
TRMT1-201ENST00000221504 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
TRMT1-201ENST00000221504 DISP3Q9P2K9 1392 aa20.2■□□□□ 0.82
TRMT1-201ENST00000221504 ADGRL1O94910 1474 aa20.2■□□□□ 0.82
TRMT1-201ENST00000221504 VWDEQ8N2E2 1590 aa20.2■□□□□ 0.82
TRMT1-201ENST00000221504 ASXL2Q76L83 1435 aa20.19■□□□□ 0.82
TRMT1-201ENST00000221504 PARD3Q8TEW0 1356 aa20.18■□□□□ 0.82
TRMT1-201ENST00000221504 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
TRMT1-201ENST00000221504 SCAPERQ9BY12 1400 aa20.17■□□□□ 0.82
TRMT1-201ENST00000221504 PPP4R2Q9NY27 417 aa20.17■□□□□ 0.82
TRMT1-201ENST00000221504 KANK1Q14678 1352 aa20.17■□□□□ 0.82
TRMT1-201ENST00000221504 PER1O15534 1290 aaPredicted RBP20.16■□□□□ 0.82
TRMT1-201ENST00000221504 NUDCQ9Y266 331 aa20.16■□□□□ 0.82
TRMT1-201ENST00000221504 TMF1P82094 1093 aa20.15■□□□□ 0.82
TRMT1-201ENST00000221504 CYB5RLQ6IPT4 315 aa20.15■□□□□ 0.82
TRMT1-201ENST00000221504 IQGAP1P46940 1657 aa20.15■□□□□ 0.82
TRMT1-201ENST00000221504 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
TRMT1-201ENST00000221504 WASHC2CQ9Y4E1 1318 aa20.13■□□□□ 0.81
TRMT1-201ENST00000221504 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
TRMT1-201ENST00000221504 STAC3Q96MF2 364 aa20.13■□□□□ 0.81
TRMT1-201ENST00000221504 KIF3BO15066 747 aa20.12■□□□□ 0.81
TRMT1-201ENST00000221504 RBM19Q9Y4C8 960 aaKnown RBP20.11■□□□□ 0.81
TRMT1-201ENST00000221504 NEURL4Q96JN8 1562 aa20.11■□□□□ 0.81
TRMT1-201ENST00000221504 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
TRMT1-201ENST00000221504 KIDINS220Q9ULH0 1771 aa20.1■□□□□ 0.81
TRMT1-201ENST00000221504 PANK3Q9H999 370 aa20.08■□□□□ 0.81
TRMT1-201ENST00000221504 RNF123Q5XPI4 1314 aa20.08■□□□□ 0.81
TRMT1-201ENST00000221504 SCAF11Q99590 1463 aaKnown RBP20.07■□□□□ 0.8
TRMT1-201ENST00000221504 ZNF518AQ6AHZ1 1483 aa20.07■□□□□ 0.8
TRMT1-201ENST00000221504 KIAA1210Q9ULL0 1709 aa20.06■□□□□ 0.8
TRMT1-201ENST00000221504 EFCAB6Q5THR3 1501 aa20.06■□□□□ 0.8
TRMT1-201ENST00000221504 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
TRMT1-201ENST00000221504 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
TRMT1-201ENST00000221504 CFAP74Q9C0B2 1584 aa20.03■□□□□ 0.8
TRMT1-201ENST00000221504 PPRC1Q5VV67 1664 aaKnown RBP20.02■□□□□ 0.8
TRMT1-201ENST00000221504 UGGT1Q9NYU2 1555 aa20.02■□□□□ 0.8
TRMT1-201ENST00000221504 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.8
TRMT1-201ENST00000221504 B4GALNT3Q6L9W6 998 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms