RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 SOGA1O94964 1423 aa13.17□□□□□ -0.3
TRPS1-201ENST00000220888 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
TRPS1-201ENST00000220888 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
TRPS1-201ENST00000220888 KIF3AQ9Y496 699 aa13.17□□□□□ -0.3
TRPS1-201ENST00000220888 MSNP26038 577 aaKnown RBP13.17□□□□□ -0.3
TRPS1-201ENST00000220888 FOXD1Q16676 465 aa13.16□□□□□ -0.3
TRPS1-201ENST00000220888 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
TRPS1-201ENST00000220888 AKAP17AQ02040 695 aaKnown RBP13.16□□□□□ -0.3
TRPS1-201ENST00000220888 HSPA5P11021 654 aaKnown RBP13.16□□□□□ -0.3
TRPS1-201ENST00000220888 COG3Q96JB2 828 aa13.15□□□□□ -0.3
TRPS1-201ENST00000220888 RALBP1Q15311 655 aa13.14□□□□□ -0.31
TRPS1-201ENST00000220888 TRAK1Q9UPV9 953 aa13.14□□□□□ -0.31
TRPS1-201ENST00000220888 NEXNQ0ZGT2 675 aa13.14□□□□□ -0.31
TRPS1-201ENST00000220888 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
TRPS1-201ENST00000220888 SYAP1Q96A49 352 aaPredicted RBP13.14□□□□□ -0.31
TRPS1-201ENST00000220888 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
TRPS1-201ENST00000220888 PSME1Q06323 249 aa13.14□□□□□ -0.31
TRPS1-201ENST00000220888 WWC1Q8IX03 1113 aa13.14□□□□□ -0.31
TRPS1-201ENST00000220888 ATF3P18847 181 aa13.13□□□□□ -0.31
TRPS1-201ENST00000220888 PTMSP20962 102 aa13.13□□□□□ -0.31
TRPS1-201ENST00000220888 LRRFIP1Q32MZ4 808 aaKnown RBP13.13□□□□□ -0.31
TRPS1-201ENST00000220888 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
TRPS1-201ENST00000220888 CECR2Q9BXF3 1484 aa13.12□□□□□ -0.31
TRPS1-201ENST00000220888 SF3B2Q13435 895 aaKnown RBP13.12□□□□□ -0.31
TRPS1-201ENST00000220888 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
TRPS1-201ENST00000220888 CSPP1Q1MSJ5 1256 aa13.12□□□□□ -0.31
TRPS1-201ENST00000220888 SYNE3Q6ZMZ3 975 aa13.12□□□□□ -0.31
TRPS1-201ENST00000220888 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
TRPS1-201ENST00000220888 VGFO15240 615 aaPredicted RBP13.12□□□□□ -0.31
TRPS1-201ENST00000220888 MPHOSPH9Q99550 1183 aa13.12□□□□□ -0.31
TRPS1-201ENST00000220888 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
TRPS1-201ENST00000220888 WASHC2AQ641Q2 1341 aa13.11□□□□□ -0.31
TRPS1-201ENST00000220888 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
TRPS1-201ENST00000220888 DHX16O60231 1041 aaKnown RBP13.1□□□□□ -0.31
TRPS1-201ENST00000220888 FMN1Q68DA7 1419 aa13.1□□□□□ -0.31
TRPS1-201ENST00000220888 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
TRPS1-201ENST00000220888 JPH4Q96JJ6 628 aa13.1□□□□□ -0.31
TRPS1-201ENST00000220888 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
TRPS1-201ENST00000220888 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
TRPS1-201ENST00000220888 TPM3P06753 285 aa13.1□□□□□ -0.31
TRPS1-201ENST00000220888 SETD5Q9C0A6 1442 aa13.1□□□□□ -0.31
TRPS1-201ENST00000220888 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
TRPS1-201ENST00000220888 PES1O00541 588 aaKnown RBP13.09□□□□□ -0.31
TRPS1-201ENST00000220888 TPD52L1Q16890 204 aaPredicted RBP13.08□□□□□ -0.32
TRPS1-201ENST00000220888 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.32
TRPS1-201ENST00000220888 CCDC43Q96MW1 224 aaKnown RBP13.07□□□□□ -0.32
TRPS1-201ENST00000220888 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
TRPS1-201ENST00000220888 FAM69CQ0P6D2 419 aa13.07□□□□□ -0.32
TRPS1-201ENST00000220888 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
TRPS1-201ENST00000220888 CPLX2Q6PUV4 134 aaKnown RBP13.06□□□□□ -0.32
TRPS1-201ENST00000220888 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
TRPS1-201ENST00000220888 MFAP1P55081 439 aaKnown RBP13.06□□□□□ -0.32
TRPS1-201ENST00000220888 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
TRPS1-201ENST00000220888 TPM2P07951 284 aa13.05□□□□□ -0.32
TRPS1-201ENST00000220888 CCDC146Q8IYE0 955 aa13.05□□□□□ -0.32
TRPS1-201ENST00000220888 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
TRPS1-201ENST00000220888 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
TRPS1-201ENST00000220888 EVC2Q86UK5 1308 aa13.05□□□□□ -0.32
TRPS1-201ENST00000220888 H3BQV1 296 aa13.05□□□□□ -0.32
TRPS1-201ENST00000220888 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
TRPS1-201ENST00000220888 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
TRPS1-201ENST00000220888 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
TRPS1-201ENST00000220888 DDX58O95786 925 aaKnown RBP13.05□□□□□ -0.32
TRPS1-201ENST00000220888 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
TRPS1-201ENST00000220888 CENPJQ9HC77 1338 aaPredicted RBP13.04□□□□□ -0.32
TRPS1-201ENST00000220888 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRPS1-201ENST00000220888 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
TRPS1-201ENST00000220888 APPP05067 770 aa13.04□□□□□ -0.32
TRPS1-201ENST00000220888 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
TRPS1-201ENST00000220888 MINK1Q8N4C8 1332 aaPredicted RBP13.03□□□□□ -0.32
TRPS1-201ENST00000220888 CCAR1Q8IX12 1150 aaKnown RBP13.02□□□□□ -0.32
TRPS1-201ENST00000220888 GOLGA6L1Q8N7Z2 621 aa13.02□□□□□ -0.32
TRPS1-201ENST00000220888 CCER2I3L3R5 266 aa13.02□□□□□ -0.32
TRPS1-201ENST00000220888 ELL2O00472 640 aaPredicted RBP13.02□□□□□ -0.32
TRPS1-201ENST00000220888 USP35Q9P2H5 1018 aa13.02□□□□□ -0.32
TRPS1-201ENST00000220888 CCDC47Q96A33 483 aaKnown RBP13.02□□□□□ -0.33
TRPS1-201ENST00000220888 RILPL2Q969X0 211 aa13.02□□□□□ -0.33
TRPS1-201ENST00000220888 ST18O60284 1047 aa13.02□□□□□ -0.33
TRPS1-201ENST00000220888 TRIM29Q14134 588 aa13.01□□□□□ -0.33
TRPS1-201ENST00000220888 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
TRPS1-201ENST00000220888 R3HCC1Q9Y3T6 440 aaKnown RBP13.01□□□□□ -0.33
TRPS1-201ENST00000220888 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
TRPS1-201ENST00000220888 PTPRGP23470 1445 aa13□□□□□ -0.33
TRPS1-201ENST00000220888 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
TRPS1-201ENST00000220888 NLRP2Q9NX02 1062 aa13□□□□□ -0.33
TRPS1-201ENST00000220888 TRDNQ13061 729 aa12.99□□□□□ -0.33
TRPS1-201ENST00000220888 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
TRPS1-201ENST00000220888 TPM1P09493 284 aa12.98□□□□□ -0.33
TRPS1-201ENST00000220888 NLRP13Q86W25 1043 aa12.98□□□□□ -0.33
TRPS1-201ENST00000220888 RRP7AQ9Y3A4 280 aaKnown RBP12.98□□□□□ -0.33
TRPS1-201ENST00000220888 ERICH2A1L162 156 aa12.98□□□□□ -0.33
TRPS1-201ENST00000220888 RUFY2Q8WXA3 655 aa12.97□□□□□ -0.33
TRPS1-201ENST00000220888 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
TRPS1-201ENST00000220888 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
TRPS1-201ENST00000220888 CPLX1O14810 134 aa12.97□□□□□ -0.33
TRPS1-201ENST00000220888 MCTP1Q6DN14 999 aa12.96□□□□□ -0.33
TRPS1-201ENST00000220888 GZF1Q9H116 711 aaPredicted RBP12.96□□□□□ -0.33
TRPS1-201ENST00000220888 G3BP1Q13283 466 aaKnown RBP eCLIP12.96□□□□□ -0.34
TRPS1-201ENST00000220888 FBXO3Q9UK99 471 aa12.96□□□□□ -0.34
TRPS1-201ENST00000220888 SMARCA2P51531 1590 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms