RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KIAA0556O60303 1618 aa20.04■□□□□ 0.8
EFNB1-201ENST00000204961 BCORL1Q5H9F3 1711 aa20.04■□□□□ 0.8
EFNB1-201ENST00000204961 NUTM2DQ5VT03 806 aaPredicted RBP20.04■□□□□ 0.8
EFNB1-201ENST00000204961 RGS3P49796 1198 aa20.03■□□□□ 0.8
EFNB1-201ENST00000204961 RTL5Q5HYW3 569 aaPredicted RBP20.03■□□□□ 0.8
EFNB1-201ENST00000204961 CRBNQ96SW2 442 aa20.03■□□□□ 0.8
EFNB1-201ENST00000204961 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
EFNB1-201ENST00000204961 AFAP1Q8N556 730 aa20.02■□□□□ 0.8
EFNB1-201ENST00000204961 ADAMTS8Q9UP79 889 aa20.02■□□□□ 0.79
EFNB1-201ENST00000204961 PTPRGP23470 1445 aa20.02■□□□□ 0.79
EFNB1-201ENST00000204961 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
EFNB1-201ENST00000204961 NLRP13Q86W25 1043 aa20.01■□□□□ 0.79
EFNB1-201ENST00000204961 KTN1Q86UP2 1357 aaKnown RBP20.01■□□□□ 0.79
EFNB1-201ENST00000204961 DNMT1P26358 1616 aaKnown RBP20■□□□□ 0.79
EFNB1-201ENST00000204961 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
EFNB1-201ENST00000204961 ERICH6BQ5W0A0 696 aa19.98■□□□□ 0.79
EFNB1-201ENST00000204961 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
EFNB1-201ENST00000204961 WDR43Q15061 677 aaKnown RBP eCLIP19.98■□□□□ 0.79
EFNB1-201ENST00000204961 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
EFNB1-201ENST00000204961 DISP3Q9P2K9 1392 aa19.97■□□□□ 0.79
EFNB1-201ENST00000204961 ATP10BO94823 1461 aa19.97■□□□□ 0.79
EFNB1-201ENST00000204961 RALBP1Q15311 655 aa19.97■□□□□ 0.79
EFNB1-201ENST00000204961 TMF1P82094 1093 aa19.94■□□□□ 0.78
EFNB1-201ENST00000204961 IPO9Q96P70 1041 aaKnown RBP19.94■□□□□ 0.78
EFNB1-201ENST00000204961 SAFB2Q14151 953 aaKnown RBP eCLIP19.94■□□□□ 0.78
EFNB1-201ENST00000204961 PDE4AP27815 886 aa19.94■□□□□ 0.78
EFNB1-201ENST00000204961 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
EFNB1-201ENST00000204961 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
EFNB1-201ENST00000204961 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
EFNB1-201ENST00000204961 ANO8Q9HCE9 1232 aaPredicted RBP19.91■□□□□ 0.78
EFNB1-201ENST00000204961 CEP170Q5SW79 1584 aa19.9■□□□□ 0.78
EFNB1-201ENST00000204961 PER1O15534 1290 aaPredicted RBP19.88■□□□□ 0.77
EFNB1-201ENST00000204961 NEFMP07197 916 aa19.88■□□□□ 0.77
EFNB1-201ENST00000204961 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
EFNB1-201ENST00000204961 KIF3BO15066 747 aa19.88■□□□□ 0.77
EFNB1-201ENST00000204961 APAF1O14727 1248 aa19.87■□□□□ 0.77
EFNB1-201ENST00000204961 FRAT1Q92837 279 aaPredicted RBP19.86■□□□□ 0.77
EFNB1-201ENST00000204961 TESK2Q96S53 571 aa19.86■□□□□ 0.77
EFNB1-201ENST00000204961 BCL2L13Q9BXK5 485 aa19.86■□□□□ 0.77
EFNB1-201ENST00000204961 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
EFNB1-201ENST00000204961 CFAP70Q5T0N1 1121 aa19.85■□□□□ 0.77
EFNB1-201ENST00000204961 BRD4O60885 1362 aaPredicted RBP19.84■□□□□ 0.77
EFNB1-201ENST00000204961 CANXP27824 592 aaKnown RBP19.84■□□□□ 0.77
EFNB1-201ENST00000204961 DAXXQ9UER7 740 aaPredicted RBP19.84■□□□□ 0.77
EFNB1-201ENST00000204961 ARHGAP5Q13017 1502 aa19.83■□□□□ 0.76
EFNB1-201ENST00000204961 ARXQ96QS3 562 aa19.82■□□□□ 0.76
EFNB1-201ENST00000204961 BCAR3O75815 825 aa19.82■□□□□ 0.76
EFNB1-201ENST00000204961 TRAK1Q9UPV9 953 aa19.81■□□□□ 0.76
EFNB1-201ENST00000204961 GGT6Q6P531 493 aa19.81■□□□□ 0.76
EFNB1-201ENST00000204961 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
EFNB1-201ENST00000204961 PPP2R1AP30153 589 aa19.8■□□□□ 0.76
EFNB1-201ENST00000204961 TMEM132EQ6IEE7 984 aa19.8■□□□□ 0.76
EFNB1-201ENST00000204961 KDM5CP41229 1560 aa19.79■□□□□ 0.76
EFNB1-201ENST00000204961 CLUAP1Q96AJ1 413 aa19.79■□□□□ 0.76
EFNB1-201ENST00000204961 RALGAPBQ86X10 1494 aa19.78■□□□□ 0.76
EFNB1-201ENST00000204961 SPAG9O60271 1321 aaKnown RBP19.78■□□□□ 0.76
EFNB1-201ENST00000204961 MBD5Q9P267 1494 aa19.78■□□□□ 0.76
EFNB1-201ENST00000204961 EFCAB2Q5VUJ9 269 aa19.77■□□□□ 0.76
EFNB1-201ENST00000204961 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
EFNB1-201ENST00000204961 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
EFNB1-201ENST00000204961 IL27Q8NEV9 243 aa19.75■□□□□ 0.75
EFNB1-201ENST00000204961 ARID4BQ4LE39 1312 aaPredicted RBP19.74■□□□□ 0.75
EFNB1-201ENST00000204961 RNF123Q5XPI4 1314 aa19.74■□□□□ 0.75
EFNB1-201ENST00000204961 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
EFNB1-201ENST00000204961 FAM135AQ9P2D6 1515 aa19.74■□□□□ 0.75
EFNB1-201ENST00000204961 ERBINQ96RT1 1412 aa19.74■□□□□ 0.75
EFNB1-201ENST00000204961 BACH2Q9BYV9 841 aa19.73■□□□□ 0.75
EFNB1-201ENST00000204961 TCERG1O14776 1098 aaKnown RBP19.73■□□□□ 0.75
EFNB1-201ENST00000204961 GOLGA2Q08379 1002 aa19.73■□□□□ 0.75
EFNB1-201ENST00000204961 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
EFNB1-201ENST00000204961 SPRYD3Q8NCJ5 442 aa19.72■□□□□ 0.75
EFNB1-201ENST00000204961 STK26Q9P289 416 aa19.72■□□□□ 0.75
EFNB1-201ENST00000204961 PANK1Q8TE04 598 aa19.71■□□□□ 0.75
EFNB1-201ENST00000204961 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.71■□□□□ 0.75
EFNB1-201ENST00000204961 COG6Q9Y2V7 657 aa19.71■□□□□ 0.75
EFNB1-201ENST00000204961 PLEKHH1Q9ULM0 1364 aa19.71■□□□□ 0.75
EFNB1-201ENST00000204961 CCDC141Q6ZP82 1450 aa19.71■□□□□ 0.75
EFNB1-201ENST00000204961 A2MP01023 1474 aa19.71■□□□□ 0.75
EFNB1-201ENST00000204961 PLA2R1Q13018 1463 aa19.71■□□□□ 0.75
EFNB1-201ENST00000204961 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
EFNB1-201ENST00000204961 PARD3Q8TEW0 1356 aa19.7■□□□□ 0.74
EFNB1-201ENST00000204961 CDC42BPAQ5VT25 1732 aa19.69■□□□□ 0.74
EFNB1-201ENST00000204961 ADGRL2O95490 1459 aa19.69■□□□□ 0.74
EFNB1-201ENST00000204961 SLC12A5Q9H2X9 1139 aa19.69■□□□□ 0.74
EFNB1-201ENST00000204961 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
EFNB1-201ENST00000204961 ITSN2Q9NZM3 1697 aa19.68■□□□□ 0.74
EFNB1-201ENST00000204961 ADGRF5Q8IZF2 1346 aa19.67■□□□□ 0.74
EFNB1-201ENST00000204961 PDE3BQ13370 1112 aa19.67■□□□□ 0.74
EFNB1-201ENST00000204961 UHRF1BP1Q6BDS2 1440 aa19.67■□□□□ 0.74
EFNB1-201ENST00000204961 DUSP27Q5VZP5 1158 aa19.66■□□□□ 0.74
EFNB1-201ENST00000204961 TRAPPC8Q9Y2L5 1435 aa19.65■□□□□ 0.74
EFNB1-201ENST00000204961 RSPH4AQ5TD94 716 aa19.65■□□□□ 0.74
EFNB1-201ENST00000204961 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
EFNB1-201ENST00000204961 NUP160Q12769 1436 aa19.64■□□□□ 0.73
EFNB1-201ENST00000204961 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
EFNB1-201ENST00000204961 PPM1GO15355 546 aaPredicted RBP19.64■□□□□ 0.73
EFNB1-201ENST00000204961 ADGBQ8N7X0 1667 aa19.62■□□□□ 0.73
EFNB1-201ENST00000204961 MORC1Q86VD1 984 aa19.62■□□□□ 0.73
EFNB1-201ENST00000204961 SLKQ9H2G2 1235 aaPredicted RBP19.62■□□□□ 0.73
EFNB1-201ENST00000204961 CFAP65Q6ZU64 1925 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms