RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PCMTD1Q96MG8 357 aaPredicted RBP4.26□□□□□ -1.73
NEB-201ENST00000172853 IPO8O15397 1037 aaKnown RBP4.26□□□□□ -1.73
NEB-201ENST00000172853 SYAP1Q96A49 352 aaPredicted RBP4.26□□□□□ -1.73
NEB-201ENST00000172853 SF3A1Q15459 793 aaKnown RBP4.26□□□□□ -1.73
NEB-201ENST00000172853 CPLX2Q6PUV4 134 aaKnown RBP4.26□□□□□ -1.73
NEB-201ENST00000172853 PAXIP1Q6ZW49 1069 aaPredicted RBP4.26□□□□□ -1.73
NEB-201ENST00000172853 ANKRD20A12PQ8NF67 263 aa4.26□□□□□ -1.73
NEB-201ENST00000172853 C16orf71Q8IYS4 520 aaPredicted RBP4.26□□□□□ -1.73
NEB-201ENST00000172853 NAP1L5Q96NT1 182 aaPredicted RBP4.26□□□□□ -1.73
NEB-201ENST00000172853 SCRIBQ14160 1630 aa4.26□□□□□ -1.73
NEB-201ENST00000172853 RGL3Q3MIN7 710 aa4.26□□□□□ -1.73
NEB-201ENST00000172853 NEBLO76041 1014 aa4.26□□□□□ -1.73
NEB-201ENST00000172853 ZFYVE27Q5T4F4 411 aa4.26□□□□□ -1.73
NEB-201ENST00000172853 FRAT1Q92837 279 aaPredicted RBP4.25□□□□□ -1.73
NEB-201ENST00000172853 MPHOSPH10O00566 681 aaKnown RBP4.25□□□□□ -1.73
NEB-201ENST00000172853 HOMER2Q9NSB8 354 aa4.25□□□□□ -1.73
NEB-201ENST00000172853 C1orf141Q5JVX7 400 aa4.25□□□□□ -1.73
NEB-201ENST00000172853 PATL2C9JE40 543 aaKnown RBP4.25□□□□□ -1.73
NEB-201ENST00000172853 GPS2Q13227 327 aa4.25□□□□□ -1.73
NEB-201ENST00000172853 SENP3-EIF4A1A0A087X0R7 540 aa4.25□□□□□ -1.73
NEB-201ENST00000172853 HSP90AB2PQ58FF8 381 aa4.25□□□□□ -1.73
NEB-201ENST00000172853 IPO7O95373 1038 aaKnown RBP4.25□□□□□ -1.73
NEB-201ENST00000172853 SAMD1Q6SPF0 538 aaPredicted RBP4.25□□□□□ -1.73
NEB-201ENST00000172853 RFX1P22670 979 aa4.25□□□□□ -1.73
NEB-201ENST00000172853 NGDNQ8NEJ9 315 aaKnown RBP4.24□□□□□ -1.73
NEB-201ENST00000172853 CCDC112Q8NEF3 446 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 ERICH2A1L162 156 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 EPS15P42566 896 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 HSP90AB4PQ58FF6 505 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 HOOK1Q9UJC3 728 aaKnown RBP4.24□□□□□ -1.73
NEB-201ENST00000172853 MYO6Q9UM54 1294 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 CCDC173Q0VFZ6 552 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 IKQ13123 557 aaPredicted RBP4.24□□□□□ -1.73
NEB-201ENST00000172853 IL27Q8NEV9 243 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 NEXNQ0ZGT2 675 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 TRIM29Q14134 588 aa4.24□□□□□ -1.73
NEB-201ENST00000172853 RSF1Q96T23 1441 aaPredicted RBP4.24□□□□□ -1.73
NEB-201ENST00000172853 TTC5Q8N0Z6 440 aa4.23□□□□□ -1.73
NEB-201ENST00000172853 SYCP1Q15431 976 aa4.23□□□□□ -1.73
NEB-201ENST00000172853 AMPHP49418 695 aa4.23□□□□□ -1.73
NEB-201ENST00000172853 TMF1P82094 1093 aa4.23□□□□□ -1.73
NEB-201ENST00000172853 DRC1Q96MC2 740 aa4.23□□□□□ -1.73
NEB-201ENST00000172853 MORC1Q86VD1 984 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 SYTL4Q96C24 671 aaPredicted RBP4.22□□□□□ -1.73
NEB-201ENST00000172853 RBM19Q9Y4C8 960 aaKnown RBP4.22□□□□□ -1.73
NEB-201ENST00000172853 PRDM2Q13029 1718 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 TRIM6-TRIM34B2RNG4 842 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 CBX1P83916 185 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 FAM184AQ8NB25 1140 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 CRBNQ96SW2 442 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 CFDP1Q9UEE9 299 aaPredicted RBP4.22□□□□□ -1.73
NEB-201ENST00000172853 LMOD3Q0VAK6 560 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 E9PSI1 815 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 H3BQV1 296 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 IFFO2Q5TF58 517 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 GGT6Q6P531 493 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 DCTN1Q14203 1278 aa4.22□□□□□ -1.73
NEB-201ENST00000172853 KIF16BQ96L93 1317 aa4.21□□□□□ -1.74
NEB-201ENST00000172853 PABPN1LA6NDY0 278 aaKnown RBP4.21□□□□□ -1.74
NEB-201ENST00000172853 TRDNQ13061 729 aa4.21□□□□□ -1.74
NEB-201ENST00000172853 HOMER1Q86YM7 354 aa4.21□□□□□ -1.74
NEB-201ENST00000172853 OFD1O75665 1012 aa4.21□□□□□ -1.74
NEB-201ENST00000172853 HMGN5P82970 282 aaKnown RBP4.21□□□□□ -1.74
NEB-201ENST00000172853 CARD11Q9BXL7 1154 aa4.21□□□□□ -1.74
NEB-201ENST00000172853 ATF3P18847 181 aa4.21□□□□□ -1.74
NEB-201ENST00000172853 DDX10Q13206 875 aaKnown RBP4.21□□□□□ -1.74
NEB-201ENST00000172853 RUFY1Q96T51 708 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 STK26Q9P289 416 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 SPRYD3Q8NCJ5 442 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 GBP4Q96PP9 640 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 BRMS1Q9HCU9 246 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 CHMP5Q9NZZ3 219 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 SEPT7Q16181 437 aaKnown RBP4.2□□□□□ -1.74
NEB-201ENST00000172853 FEZ1Q99689 392 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 SART3Q15020 963 aaKnown RBP4.2□□□□□ -1.74
NEB-201ENST00000172853 SLC3A2P08195 630 aaKnown RBP4.2□□□□□ -1.74
NEB-201ENST00000172853 STAC3Q96MF2 364 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 UQCRHLA0A096LP55 91 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 NFXL1Q6ZNB6 911 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 PDCL3Q9H2J4 239 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 CCDC191Q8NCU4 936 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 SLC4A3P48751 1232 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 XBP1P17861 261 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 APPP05067 770 aa4.2□□□□□ -1.74
NEB-201ENST00000172853 APBB1O00213 710 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 PLCD3Q8N3E9 789 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 MAPK8IP2Q13387 824 aaPredicted RBP4.19□□□□□ -1.74
NEB-201ENST00000172853 EZRP15311 586 aaKnown RBP4.19□□□□□ -1.74
NEB-201ENST00000172853 NEFHP12036 1026 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 GOLGA6L19H0YKK7 550 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 NAP1L1P55209 391 aaKnown RBP4.19□□□□□ -1.74
NEB-201ENST00000172853 PHF14O94880 888 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 SAFBQ15424 915 aaKnown RBP eCLIP4.19□□□□□ -1.74
NEB-201ENST00000172853 CA8P35219 290 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 FAM161AQ3B820 660 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 MPHOSPH6Q99547 160 aaKnown RBP4.19□□□□□ -1.74
NEB-201ENST00000172853 PIP4K2BP78356 416 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 LTV1Q96GA3 475 aaPredicted RBP4.19□□□□□ -1.74
NEB-201ENST00000172853 CLIP1P30622 1438 aa4.19□□□□□ -1.74
NEB-201ENST00000172853 TCERG1O14776 1098 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms