RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 RRP7AQ9Y3A4 280 aaKnown RBP14.56□□□□□ -0.08
PKP2-201ENST00000070846 CHMP3Q9Y3E7 222 aa14.56□□□□□ -0.08
PKP2-201ENST00000070846 CASKIN1Q8WXD9 1431 aa14.56□□□□□ -0.08
PKP2-201ENST00000070846 CUX1P39880 1505 aa14.55□□□□□ -0.08
PKP2-201ENST00000070846 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
PKP2-201ENST00000070846 ELL2O00472 640 aaPredicted RBP14.55□□□□□ -0.08
PKP2-201ENST00000070846 TMX4Q9H1E5 349 aaPredicted RBP14.55□□□□□ -0.08
PKP2-201ENST00000070846 CENPJQ9HC77 1338 aaPredicted RBP14.55□□□□□ -0.08
PKP2-201ENST00000070846 SLC4A10Q6U841 1118 aa14.55□□□□□ -0.08
PKP2-201ENST00000070846 SLC26A8Q96RN1 970 aa14.55□□□□□ -0.08
PKP2-201ENST00000070846 NAP1L2Q9ULW6 460 aaPredicted RBP14.55□□□□□ -0.08
PKP2-201ENST00000070846 DHX57Q6P158 1386 aaKnown RBP14.55□□□□□ -0.08
PKP2-201ENST00000070846 MSH5O43196 834 aa14.54□□□□□ -0.08
PKP2-201ENST00000070846 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
PKP2-201ENST00000070846 B4GALNT3Q6L9W6 998 aa14.54□□□□□ -0.08
PKP2-201ENST00000070846 NCOA2Q15596 1464 aa14.54□□□□□ -0.08
PKP2-201ENST00000070846 TEFQ10587 303 aa14.54□□□□□ -0.08
PKP2-201ENST00000070846 CLUAP1Q96AJ1 413 aa14.53□□□□□ -0.08
PKP2-201ENST00000070846 TPRNQ4KMQ1 711 aa14.53□□□□□ -0.08
PKP2-201ENST00000070846 ISY1Q9ULR0 285 aaKnown RBP14.53□□□□□ -0.08
PKP2-201ENST00000070846 C1orf141Q5JVX7 400 aa14.52□□□□□ -0.08
PKP2-201ENST00000070846 BECN1Q14457 450 aa14.52□□□□□ -0.08
PKP2-201ENST00000070846 TULP1O00294 542 aaPredicted RBP14.52□□□□□ -0.09
PKP2-201ENST00000070846 TAF7LQ5H9L4 462 aa14.52□□□□□ -0.09
PKP2-201ENST00000070846 SMC4Q9NTJ3 1288 aa14.52□□□□□ -0.09
PKP2-201ENST00000070846 USP47Q96K76 1375 aa14.52□□□□□ -0.09
PKP2-201ENST00000070846 ARAP1Q96P48 1450 aa14.52□□□□□ -0.09
PKP2-201ENST00000070846 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.09
PKP2-201ENST00000070846 NLRP6P59044 892 aa14.51□□□□□ -0.09
PKP2-201ENST00000070846 USP35Q9P2H5 1018 aa14.51□□□□□ -0.09
PKP2-201ENST00000070846 LRRC9Q6ZRR7 1453 aa14.51□□□□□ -0.09
PKP2-201ENST00000070846 ITPRIPQ8IWB1 547 aa14.51□□□□□ -0.09
PKP2-201ENST00000070846 NBR1Q14596 966 aa14.5□□□□□ -0.09
PKP2-201ENST00000070846 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
PKP2-201ENST00000070846 PPP4R2Q9NY27 417 aa14.5□□□□□ -0.09
PKP2-201ENST00000070846 ESCO1Q5FWF5 840 aa14.49□□□□□ -0.09
PKP2-201ENST00000070846 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
PKP2-201ENST00000070846 KIF21BO75037 1637 aa14.49□□□□□ -0.09
PKP2-201ENST00000070846 GORABQ5T7V8 394 aa14.49□□□□□ -0.09
PKP2-201ENST00000070846 NLRP2Q9NX02 1062 aa14.49□□□□□ -0.09
PKP2-201ENST00000070846 KIAA0586Q9BVV6 1533 aa14.49□□□□□ -0.09
PKP2-201ENST00000070846 TROQ12816 1431 aaPredicted RBP14.49□□□□□ -0.09
PKP2-201ENST00000070846 STAC3Q96MF2 364 aa14.49□□□□□ -0.09
PKP2-201ENST00000070846 ANKLE2Q86XL3 938 aa14.48□□□□□ -0.09
PKP2-201ENST00000070846 DNMBPQ6XZF7 1577 aa14.48□□□□□ -0.09
PKP2-201ENST00000070846 GGNBP2Q9H3C7 697 aa14.48□□□□□ -0.09
PKP2-201ENST00000070846 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
PKP2-201ENST00000070846 NGEFQ8N5V2 710 aa14.48□□□□□ -0.09
PKP2-201ENST00000070846 PMFBP1Q8TBY8 1022 aa14.48□□□□□ -0.09
PKP2-201ENST00000070846 PRXQ9BXM0 1461 aa14.47□□□□□ -0.09
PKP2-201ENST00000070846 SLC52A1Q9NWF4 448 aa14.47□□□□□ -0.09
PKP2-201ENST00000070846 FYCO1Q9BQS8 1478 aa14.47□□□□□ -0.09
PKP2-201ENST00000070846 NCLP19338 710 aaKnown RBP14.47□□□□□ -0.09
PKP2-201ENST00000070846 RAPGEF4Q8WZA2 1011 aa14.46□□□□□ -0.09
PKP2-201ENST00000070846 G3V3G9 751 aa14.46□□□□□ -0.1
PKP2-201ENST00000070846 DCAF8Q5TAQ9 597 aa14.46□□□□□ -0.1
PKP2-201ENST00000070846 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
PKP2-201ENST00000070846 TTC5Q8N0Z6 440 aa14.45□□□□□ -0.1
PKP2-201ENST00000070846 EIF5BO60841 1220 aaKnown RBP14.44□□□□□ -0.1
PKP2-201ENST00000070846 ABTB2Q8N961 1025 aa14.44□□□□□ -0.1
PKP2-201ENST00000070846 PRAM1Q96QH2 718 aa14.44□□□□□ -0.1
PKP2-201ENST00000070846 DIAPH1O60610 1272 aaKnown RBP14.44□□□□□ -0.1
PKP2-201ENST00000070846 CD109Q6YHK3 1445 aa14.43□□□□□ -0.1
PKP2-201ENST00000070846 FRAT2O75474 233 aaPredicted RBP14.43□□□□□ -0.1
PKP2-201ENST00000070846 HDAC5Q9UQL6 1122 aa14.43□□□□□ -0.1
PKP2-201ENST00000070846 EIF2S2P20042 333 aaKnown RBP14.43□□□□□ -0.1
PKP2-201ENST00000070846 BCL2L13Q9BXK5 485 aa14.43□□□□□ -0.1
PKP2-201ENST00000070846 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
PKP2-201ENST00000070846 PIP4K2BP78356 416 aa14.42□□□□□ -0.1
PKP2-201ENST00000070846 POGZQ7Z3K3 1410 aa14.42□□□□□ -0.1
PKP2-201ENST00000070846 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
PKP2-201ENST00000070846 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
PKP2-201ENST00000070846 C9orf84Q5VXU9 1444 aa14.42□□□□□ -0.1
PKP2-201ENST00000070846 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
PKP2-201ENST00000070846 NUTM2BA6NNL0 878 aaPredicted RBP14.41□□□□□ -0.1
PKP2-201ENST00000070846 NUTM2EB1AL46 878 aaPredicted RBP14.41□□□□□ -0.1
PKP2-201ENST00000070846 APAF1O14727 1248 aa14.41□□□□□ -0.1
PKP2-201ENST00000070846 CEBPAP49715 358 aaPredicted RBP14.41□□□□□ -0.1
PKP2-201ENST00000070846 ZRSR1Q15695 479 aaKnown RBP14.41□□□□□ -0.1
PKP2-201ENST00000070846 NUTM2AQ8IVF1 878 aaPredicted RBP14.41□□□□□ -0.1
PKP2-201ENST00000070846 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
PKP2-201ENST00000070846 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
PKP2-201ENST00000070846 GPRASP1Q5JY77 1395 aa14.4□□□□□ -0.1
PKP2-201ENST00000070846 ERICH3Q5RHP9 1530 aa14.4□□□□□ -0.1
PKP2-201ENST00000070846 HMOX1P09601 288 aa14.4□□□□□ -0.1
PKP2-201ENST00000070846 NBPF1Q3BBV0 1214 aa14.4□□□□□ -0.1
PKP2-201ENST00000070846 NECTIN2Q92692 538 aa14.4□□□□□ -0.1
PKP2-201ENST00000070846 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
PKP2-201ENST00000070846 PRKRIP1Q9H875 184 aaPredicted RBP14.39□□□□□ -0.11
PKP2-201ENST00000070846 STRN4Q9NRL3 753 aa14.39□□□□□ -0.11
PKP2-201ENST00000070846 TCERG1O14776 1098 aaKnown RBP14.39□□□□□ -0.11
PKP2-201ENST00000070846 PLB1Q6P1J6 1458 aa14.38□□□□□ -0.11
PKP2-201ENST00000070846 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
PKP2-201ENST00000070846 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
PKP2-201ENST00000070846 HMMRO75330 724 aa14.37□□□□□ -0.11
PKP2-201ENST00000070846 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
PKP2-201ENST00000070846 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
PKP2-201ENST00000070846 GRIN2AQ12879 1464 aa14.35□□□□□ -0.11
PKP2-201ENST00000070846 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
PKP2-201ENST00000070846 RIPK4P57078 832 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms