RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Cwc22Q8C5N3 908 aaKnown RBP29.45■■■□□ 2.31
Trim27-207ENSMUST00000223065 AI481877A2ALV5 1481 aa29.45■■■□□ 2.3
Trim27-207ENSMUST00000223065 Ifnlr1Q8CGK5 535 aa29.45■■■□□ 2.3
Trim27-207ENSMUST00000223065 Dot1lQ6XZL8 1540 aa29.44■■■□□ 2.3
Trim27-207ENSMUST00000223065 Znf608Q56A10 1511 aa29.44■■■□□ 2.3
Trim27-207ENSMUST00000223065 Rock1P70335 1354 aa29.43■■■□□ 2.3
Trim27-207ENSMUST00000223065 Zbtb7cQ8VCZ7 619 aa29.42■■■□□ 2.3
Trim27-207ENSMUST00000223065 Myom3A2ABU4 1439 aa29.41■■■□□ 2.3
Trim27-207ENSMUST00000223065 Rundc1Q0VDN7 615 aa29.41■■■□□ 2.3
Trim27-207ENSMUST00000223065 Cd109Q8R422 1442 aa29.41■■■□□ 2.3
Trim27-207ENSMUST00000223065 Spag9Q58A65 1321 aaKnown RBP29.4■■■□□ 2.3
Trim27-207ENSMUST00000223065 Cpsf1Q9EPU4 1441 aaKnown RBP29.38■■■□□ 2.29
Trim27-207ENSMUST00000223065 Kidins220E9Q9B7 1793 aa29.38■■■□□ 2.29
Trim27-207ENSMUST00000223065 Naip6Q9JIB6 1403 aa29.37■■■□□ 2.29
Trim27-207ENSMUST00000223065 Ak9G3UYQ4 1894 aa29.37■■■□□ 2.29
Trim27-207ENSMUST00000223065 Pcdh10E9PXQ7 1057 aa29.36■■■□□ 2.29
Trim27-207ENSMUST00000223065 Tnnt3Q9QZ47 272 aa29.36■■■□□ 2.29
Trim27-207ENSMUST00000223065 Atp7aQ64430 1491 aa29.35■■■□□ 2.29
Trim27-207ENSMUST00000223065 Znf710Q3U288 666 aa29.35■■■□□ 2.29
Trim27-207ENSMUST00000223065 Card11Q8CIS0 1159 aa29.35■■■□□ 2.29
Trim27-207ENSMUST00000223065 Plekhg5Q66T02 1073 aa29.34■■■□□ 2.29
Trim27-207ENSMUST00000223065 Grwd1Q810D6 446 aaKnown RBP29.34■■■□□ 2.29
Trim27-207ENSMUST00000223065 Polr3aB2RXC6 1390 aa29.34■■■□□ 2.29
Trim27-207ENSMUST00000223065 Iqgap1Q9JKF1 1657 aaKnown RBP29.32■■■□□ 2.28
Trim27-207ENSMUST00000223065 Cdk13Q69ZA1 1511 aaKnown RBP29.32■■■□□ 2.28
Trim27-207ENSMUST00000223065 Map3k5O35099 1380 aa29.31■■■□□ 2.28
Trim27-207ENSMUST00000223065 RalgapbQ8BQZ4 1484 aa29.3■■■□□ 2.28
Trim27-207ENSMUST00000223065 Robo2Q7TPD3 1470 aa29.3■■■□□ 2.28
Trim27-207ENSMUST00000223065 Pde4cQ3UEI1 686 aa29.3■■■□□ 2.28
Trim27-207ENSMUST00000223065 Gm13695A2AK44 830 aa29.28■■■□□ 2.28
Trim27-207ENSMUST00000223065 Washc2Q6PGL7 1334 aa29.28■■■□□ 2.28
Trim27-207ENSMUST00000223065 Ppip5k1A2ARP1 1436 aa29.27■■■□□ 2.28
Trim27-207ENSMUST00000223065 Zfyve16Q80U44 1528 aa29.26■■■□□ 2.28
Trim27-207ENSMUST00000223065 Tarbp1E9Q368 1579 aa29.25■■■□□ 2.27
Trim27-207ENSMUST00000223065 Abca17E9PX95 1733 aa29.24■■■□□ 2.27
Trim27-207ENSMUST00000223065 Hnrnpul2Q00PI9 745 aaKnown RBP29.23■■■□□ 2.27
Trim27-207ENSMUST00000223065 Usp54Q8BL06 1588 aaKnown RBP29.22■■■□□ 2.27
Trim27-207ENSMUST00000223065 Ppp1r18Q8BQ30 594 aa29.21■■■□□ 2.27
Trim27-207ENSMUST00000223065 Kif1bQ60575 1816 aaKnown RBP29.2■■■□□ 2.27
Trim27-207ENSMUST00000223065 ShprhQ7TPQ3 1674 aa29.2■■■□□ 2.27
Trim27-207ENSMUST00000223065 Arid3cA6PWV5 409 aa29.2■■■□□ 2.26
Trim27-207ENSMUST00000223065 Rock2P70336 1388 aa29.18■■■□□ 2.26
Trim27-207ENSMUST00000223065 1700123L14RikQ3V2K7 440 aa29.18■■■□□ 2.26
Trim27-207ENSMUST00000223065 Abca9Q8K449 1623 aa29.18■■■□□ 2.26
Trim27-207ENSMUST00000223065 Aplp2Q06335 707 aa29.17■■■□□ 2.26
Trim27-207ENSMUST00000223065 Hdac5Q9Z2V6 1113 aa29.16■■■□□ 2.26
Trim27-207ENSMUST00000223065 Nsd2Q8BVE8 1365 aa29.16■■■□□ 2.26
Trim27-207ENSMUST00000223065 Edc4Q3UJB9 1406 aaKnown RBP29.15■■■□□ 2.26
Trim27-207ENSMUST00000223065 Xrn1P97789 1719 aaKnown RBP29.15■■■□□ 2.26
Trim27-207ENSMUST00000223065 Mrs2Q5NCE8 434 aa29.13■■■□□ 2.25
Trim27-207ENSMUST00000223065 Lemd3Q9WU40 921 aa29.12■■■□□ 2.25
Trim27-207ENSMUST00000223065 Wwc2Q6NXJ0 1187 aa29.11■■■□□ 2.25
Trim27-207ENSMUST00000223065 Nos1Q9Z0J4 1429 aa29.11■■■□□ 2.25
Trim27-207ENSMUST00000223065 Exoc6Q8R313 802 aa29.09■■■□□ 2.25
Trim27-207ENSMUST00000223065 Adamts13Q769J6 1426 aa29.07■■■□□ 2.24
Trim27-207ENSMUST00000223065 Slc4a2P13808 1237 aaKnown RBP29.07■■■□□ 2.24
Trim27-207ENSMUST00000223065 Slc24a1Q91WD8 1130 aa29.06■■■□□ 2.24
Trim27-207ENSMUST00000223065 Clasp1Q80TV8 1535 aaKnown RBP29.06■■■□□ 2.24
Trim27-207ENSMUST00000223065 PnisrA2AJT4 805 aaKnown RBP29.04■■■□□ 2.24
Trim27-207ENSMUST00000223065 Ifit1bl1D3Z6F0 470 aa29.04■■■□□ 2.24
Trim27-207ENSMUST00000223065 Ylpm1Q9R0I7 1386 aaKnown RBP29.04■■■□□ 2.24
Trim27-207ENSMUST00000223065 Kif3bQ61771 747 aa29.03■■■□□ 2.24
Trim27-207ENSMUST00000223065 Myo5cE9Q1F5 1742 aa29.03■■■□□ 2.24
Trim27-207ENSMUST00000223065 Mroh3A0A1D5RM54 893 aa29.03■■■□□ 2.24
Trim27-207ENSMUST00000223065 Setd1aE9PYH6 1716 aa29■■■□□ 2.23
Trim27-207ENSMUST00000223065 Znf518aB2RRF6 1478 aaKnown RBP28.99■■■□□ 2.23
Trim27-207ENSMUST00000223065 Ttc37F8VPK0 1563 aa28.99■■■□□ 2.23
Trim27-207ENSMUST00000223065 NrdcQ8BHG1 1161 aa28.98■■■□□ 2.23
Trim27-207ENSMUST00000223065 Depdc5P61460 1591 aa28.98■■■□□ 2.23
Trim27-207ENSMUST00000223065 Tulp4Q9JIL5 1547 aa28.95■■■□□ 2.22
Trim27-207ENSMUST00000223065 Fndc1E9Q043 1732 aa28.93■■■□□ 2.22
Trim27-207ENSMUST00000223065 Kdm5cP41230 1554 aa28.92■■■□□ 2.22
Trim27-207ENSMUST00000223065 Erich6D3Z6S9 713 aa28.91■■■□□ 2.22
Trim27-207ENSMUST00000223065 Ttc21bQ0HA38 1315 aa28.91■■■□□ 2.22
Trim27-207ENSMUST00000223065 OvosQ3UU35 1456 aa28.91■■■□□ 2.22
Trim27-207ENSMUST00000223065 AnkarA2RT91 1465 aa28.9■■■□□ 2.22
Trim27-207ENSMUST00000223065 Abcc6Q9R1S7 1498 aa28.89■■■□□ 2.22
Trim27-207ENSMUST00000223065 Tmem131lQ3U3D7 1597 aa28.88■■■□□ 2.21
Trim27-207ENSMUST00000223065 Uggt2E9Q4X2 1504 aa28.88■■■□□ 2.21
Trim27-207ENSMUST00000223065 AdgbG3UZ78 1657 aa28.86■■■□□ 2.21
Trim27-207ENSMUST00000223065 Abca6Q8K441 1624 aa28.86■■■□□ 2.21
Trim27-207ENSMUST00000223065 Tubgcp6G5E8P0 1769 aa28.85■■■□□ 2.21
Trim27-207ENSMUST00000223065 Topbp1Q6ZQF0 1515 aa28.84■■■□□ 2.21
Trim27-207ENSMUST00000223065 Sall3Q62255 1320 aa28.84■■■□□ 2.21
Trim27-207ENSMUST00000223065 Plch2A2AP18 1501 aa28.83■■■□□ 2.21
Trim27-207ENSMUST00000223065 Atp10aO54827 1508 aa28.83■■■□□ 2.21
Trim27-207ENSMUST00000223065 Zbtb4Q5F293 982 aa28.81■■■□□ 2.2
Trim27-207ENSMUST00000223065 SafbD3YXK2 937 aaKnown RBP28.79■■■□□ 2.2
Trim27-207ENSMUST00000223065 Iqgap3F8VQ29 1632 aa28.79■■■□□ 2.2
Trim27-207ENSMUST00000223065 ErbinQ80TH2 1402 aa28.78■■■□□ 2.2
Trim27-207ENSMUST00000223065 AglF8VPN4 1532 aa28.77■■■□□ 2.2
Trim27-207ENSMUST00000223065 Gm38655A0A286YDK6 273 aa28.77■■■□□ 2.2
Trim27-207ENSMUST00000223065 Prex1Q69ZK0 1650 aa28.76■■■□□ 2.19
Trim27-207ENSMUST00000223065 Kdm2aP59997 1161 aa28.76■■■□□ 2.19
Trim27-207ENSMUST00000223065 Ptch1Q61115 1434 aa28.73■■■□□ 2.19
Trim27-207ENSMUST00000223065 Srcin1Q9QWI6 1250 aa28.73■■■□□ 2.19
Trim27-207ENSMUST00000223065 Gli2Q0VGT2 1544 aa28.73■■■□□ 2.19
Trim27-207ENSMUST00000223065 PrxO55103 1391 aa28.72■■■□□ 2.19
Trim27-207ENSMUST00000223065 CenpbP27790 599 aa28.72■■■□□ 2.19
Trim27-207ENSMUST00000223065 Stk24Q99KH8 431 aa28.72■■■□□ 2.19
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms