RNA–Protein interactions for RNA: ENSMUST00000193170.1

Ccdc71-202, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-202ENSMUST00000193170 Pkd2O35245 966 aa12.1□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Rbm27Q5SFM8 1060 aaKnown RBP12.1□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Pak3Q61036 559 aa12.09□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Hap1O35668 628 aa12.08□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 MafgO54790 162 aa12.08□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Mroh2bQ7M6Y6 1581 aa12.08□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Mrc2Q64449 1479 aa12.08□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 CadpsQ80TJ1 1355 aa12.08□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Tcf3P15806 651 aa12.08□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Hdac6Q9Z2V5 1149 aa12.08□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Map3k1P53349 1493 aa12.07□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Camsap1A2AHC3 1581 aa12.07□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Ccdc69Q3TCJ8 202 aa12.07□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 CanxP35564 591 aaKnown RBP12.06□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Tmco4Q91WU4 631 aa12.06□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Chrna2Q91X60 512 aa12.05□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Wwc2Q6NXJ0 1187 aa12.05□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Cux1P53564 1515 aa12.04□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Slc4a3P16283 1227 aa12.04□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Erich3F6QRE9 1637 aa12.04□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Cux2P70298 1426 aa12.04□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Noa1Q9JJG9 693 aaKnown RBP12.04□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Wdr43Q6ZQL4 677 aaKnown RBP12.03□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Apbb1Q9QXJ1 710 aa12.03□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Washc2Q6PGL7 1334 aa12.03□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Mrs2Q5NCE8 434 aa12.03□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Ak7Q9D2H2 614 aa12.03□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Grin2bQ01097 1482 aa12.03□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Slc4a2P13808 1237 aaKnown RBP12.03□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Zfyve27Q3TXX3 415 aa12.03□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Fhad1A6PWD2 1420 aa12.02□□□□□ -0.48
Ccdc71-202ENSMUST00000193170 Ipo4Q8VI75 1082 aa12.02□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Liat1Q810M6 228 aa12.01□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Lmod3E9QA62 571 aa12.01□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Ankrd36D3Z4K0 1415 aa12.01□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Naip5Q9R016 1403 aa12□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Cwc22Q8C5N3 908 aaKnown RBP12□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Naip2Q9QUK4 1447 aa12□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Lmo7E9PYF4 1699 aaKnown RBP11.99□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Safb2Q80YR5 991 aaKnown RBP11.99□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Smarca5Q91ZW3 1051 aaKnown RBP11.99□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 CntlnA2AM05 1397 aa11.99□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 UncxO08934 530 aa11.99□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 ChgaP26339 463 aaKnown RBP11.99□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Dennd4bQ3U1Y4 1499 aa11.98□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 FosbP13346 338 aa11.98□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Vps8Q0P5W1 1427 aa11.98□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Gm7298A0A0N4SVU1 1476 aa11.98□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Mia2Q91ZV0 1396 aa11.98□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Kcnh8P59111 1102 aa11.97□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Ncoa2Q61026 1462 aa11.97□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Ccer2J3QPU5 274 aa11.97□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Stk10O55098 966 aa11.97□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Gsdma3Q5Y4Y6 464 aa11.97□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Fyco1Q8VDC1 1437 aa11.97□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Egfem1Q8C088 590 aa11.96□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Exoc6Q8R313 802 aa11.96□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 A2mQ6GQT1 1474 aa11.96□□□□□ -0.49
Ccdc71-202ENSMUST00000193170 Slc24a3Q99PD7 645 aa11.96□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Ankrd13aQ80UP5 588 aa11.95□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Efcab5A0JP43 1406 aa11.95□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Gimap8Q75N62 688 aa11.94□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Gm1043A0A140LJC2 1431 aa11.94□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 1700122O11RikJ3QPW6 241 aa11.94□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Fam117aQ7TNF9 451 aa11.93□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Zfp644E9QA22 1323 aa11.93□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Fam43aQ8BUP8 424 aa11.93□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Rimbp2Q80U40 1072 aa11.92□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Dnttip2Q8R2M2 758 aaKnown RBP11.92□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Slc7a3P70423 618 aa11.92□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Mphosph9A6H5Y1 991 aa11.91□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Carmil1Q6EDY6 1374 aa11.91□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Dnajc14Q921R4 703 aa11.91□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Kif21aQ9QXL2 1672 aa11.9□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Urb2E9Q7L1 1524 aaKnown RBP11.9□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Ccnb3Q810T2 1396 aa11.9□□□□□ -0.5
Ccdc71-202ENSMUST00000193170 Crocc2F6XLV1 1638 aa11.9□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Znf526Q8BI66 675 aa11.89□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Arhgap27A2AB59 869 aa11.89□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 SowahcQ8C0J6 512 aa11.89□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 StimateQ3UF25 288 aa11.89□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Gtf2e1Q9D0D5 440 aa11.88□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Jade2Q6ZQF7 829 aa11.87□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Pwp2Q8BU03 919 aaKnown RBP11.87□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 SelenooQ9DBC0 667 aa11.86□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Camsap2Q8C1B1 1461 aa11.86□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Ppme1Q8BVQ5 386 aa11.86□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Wdhd1P59328 1117 aa11.86□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Fkbp15Q6P9Q6 1216 aaKnown RBP11.86□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Pprc1Q6NZN1 1644 aa11.85□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Zc3h4Q6ZPZ3 1304 aaKnown RBP11.85□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 L3mbtl2P59178 703 aa11.84□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Znf622Q91VY9 476 aa11.84□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Speer4f1Q9D5Q6 258 aa11.84□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Cabp1Q9JLK7 227 aa11.84□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Ncoa1P70365 1447 aa11.84□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 LrpprcQ6PB66 1392 aaKnown RBP11.83□□□□□ -0.51
Ccdc71-202ENSMUST00000193170 Sirt1Q923E4 737 aa11.83□□□□□ -0.52
Ccdc71-202ENSMUST00000193170 Usp47Q8BY87 1376 aa11.83□□□□□ -0.52
Ccdc71-202ENSMUST00000193170 PnisrA2AJT4 805 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms