RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Topbp1Q6ZQF0 1515 aa20.73■□□□□ 0.91
Ercc1-203ENSMUST00000160369 MyclP10166 368 aa20.71■□□□□ 0.91
Ercc1-203ENSMUST00000160369 Usp54Q8BL06 1588 aaKnown RBP20.7■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Fhad1A6PWD2 1420 aa20.7■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Zbtb7cQ8VCZ7 619 aa20.69■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Ube2uB1AUC4 352 aa20.68■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Vps8Q0P5W1 1427 aa20.68■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Supt6hQ62383 1726 aaKnown RBP20.67■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Myom2Q14BI5 1463 aa20.67■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Trpm2Q91YD4 1506 aa20.67■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Abca6Q8K441 1624 aa20.65■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Hnrnpul2Q00PI9 745 aaKnown RBP20.65■□□□□ 0.9
Ercc1-203ENSMUST00000160369 Naip5Q9R016 1403 aa20.64■□□□□ 0.89
Ercc1-203ENSMUST00000160369 Brwd3A2AHJ4 1799 aa20.64■□□□□ 0.89
Ercc1-203ENSMUST00000160369 Nup155Q99P88 1391 aaKnown RBP20.63■□□□□ 0.89
Ercc1-203ENSMUST00000160369 Kif1bQ60575 1816 aaKnown RBP20.63■□□□□ 0.89
Ercc1-203ENSMUST00000160369 Pde4cQ3UEI1 686 aa20.63■□□□□ 0.89
Ercc1-203ENSMUST00000160369 PtprmP28828 1452 aa20.62■□□□□ 0.89
Ercc1-203ENSMUST00000160369 ShprhQ7TPQ3 1674 aa20.61■□□□□ 0.89
Ercc1-203ENSMUST00000160369 Map4P27546 1125 aaKnown RBP20.61■□□□□ 0.89
Ercc1-203ENSMUST00000160369 Myo5cE9Q1F5 1742 aa20.59■□□□□ 0.89
Ercc1-203ENSMUST00000160369 CltcQ68FD5 1675 aaKnown RBP20.59■□□□□ 0.89
Ercc1-203ENSMUST00000160369 AlkP97793 1621 aa20.59■□□□□ 0.89
Ercc1-203ENSMUST00000160369 RictorQ6QI06 1708 aa20.56■□□□□ 0.88
Ercc1-203ENSMUST00000160369 Gm13697A2AK42 830 aa20.56■□□□□ 0.88
Ercc1-203ENSMUST00000160369 Cyb5rlB1AS42 316 aa20.56■□□□□ 0.88
Ercc1-203ENSMUST00000160369 Zfp644E9QA22 1323 aa20.54■□□□□ 0.88
Ercc1-203ENSMUST00000160369 Knl1Q66JQ7 1612 aa20.53■□□□□ 0.88
Ercc1-203ENSMUST00000160369 Ccer2J3QPU5 274 aa20.53■□□□□ 0.88
Ercc1-203ENSMUST00000160369 Adamts7Q68SA9 1657 aa20.51■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Nsd2Q8BVE8 1365 aa20.51■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Prex1Q69ZK0 1650 aa20.51■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Ylpm1Q9R0I7 1386 aaKnown RBP20.5■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Hfm1D3Z4R1 1434 aa20.5■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Dip2bQ3UH60 1574 aa20.49■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Arhgap23Q69ZH9 1483 aa20.49■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Med14A2ABV5 1459 aaKnown RBP20.48■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Robo2Q7TPD3 1470 aa20.48■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Ahdc1Q6PAL7 1594 aaKnown RBP20.47■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Myom3A2ABU4 1439 aa20.47■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Ttll5Q8CHB8 1328 aa20.47■□□□□ 0.87
Ercc1-203ENSMUST00000160369 4930407I10RikD3Z5T8 1512 aa20.47■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Bcl9Q9D219 1425 aa20.46■□□□□ 0.87
Ercc1-203ENSMUST00000160369 Ttc21bQ0HA38 1315 aa20.46■□□□□ 0.87
Ercc1-203ENSMUST00000160369 PtprgQ05909 1442 aa20.44■□□□□ 0.86
Ercc1-203ENSMUST00000160369 Cd109Q8R422 1442 aa20.44■□□□□ 0.86
Ercc1-203ENSMUST00000160369 Abcc6Q9R1S7 1498 aa20.43■□□□□ 0.86
Ercc1-203ENSMUST00000160369 Trak1Q6PD31 939 aa20.42■□□□□ 0.86
Ercc1-203ENSMUST00000160369 Mphosph9A6H5Y1 991 aa20.41■□□□□ 0.86
Ercc1-203ENSMUST00000160369 AnkarA2RT91 1465 aa20.41■□□□□ 0.86
Ercc1-203ENSMUST00000160369 Asxl1P59598 1514 aa20.41■□□□□ 0.86
Ercc1-203ENSMUST00000160369 Mier1Q5UAK0 511 aa20.4■□□□□ 0.86
Ercc1-203ENSMUST00000160369 Hdac5Q9Z2V6 1113 aa20.4■□□□□ 0.86
Ercc1-203ENSMUST00000160369 Tmem131lQ3U3D7 1597 aa20.38■□□□□ 0.85
Ercc1-203ENSMUST00000160369 Lamc1P02468 1607 aaKnown RBP20.38■□□□□ 0.85
Ercc1-203ENSMUST00000160369 GphnQ8BUV3 769 aaKnown RBP20.37■□□□□ 0.85
Ercc1-203ENSMUST00000160369 Topaz1E5FYH1 1653 aa20.36■□□□□ 0.85
Ercc1-203ENSMUST00000160369 Akap12Q9WTQ5 1684 aa20.36■□□□□ 0.85
Ercc1-203ENSMUST00000160369 Adgrb3Q80ZF8 1522 aa20.33■□□□□ 0.85
Ercc1-203ENSMUST00000160369 Ercc6l2Q9JIM3 1537 aa20.32■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Tarbp1E9Q368 1579 aa20.31■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Erich6D3Z6S9 713 aa20.31■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Skint5A7XUY5 1461 aa20.3■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Atp7aQ64430 1491 aa20.3■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Tecpr2Q3UH45 1423 aa20.28■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Ino80Q6ZPV2 1559 aa20.28■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Kif21bQ9QXL1 1668 aa20.28■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Kdm5aQ3UXZ9 1690 aa20.27■□□□□ 0.84
Ercc1-203ENSMUST00000160369 Pkd2O35245 966 aa20.26■□□□□ 0.83
Ercc1-203ENSMUST00000160369 Iqgap3F8VQ29 1632 aa20.26■□□□□ 0.83
Ercc1-203ENSMUST00000160369 Efcab6Q6P1E8 1516 aa20.26■□□□□ 0.83
Ercc1-203ENSMUST00000160369 Uggt1Q6P5E4 1551 aa20.23■□□□□ 0.83
Ercc1-203ENSMUST00000160369 ErbinQ80TH2 1402 aa20.23■□□□□ 0.83
Ercc1-203ENSMUST00000160369 Chd2E9PZM4 1827 aaKnown RBP20.23■□□□□ 0.83
Ercc1-203ENSMUST00000160369 Dip2aQ8BWT5 1523 aa20.22■□□□□ 0.83
Ercc1-203ENSMUST00000160369 Stk24Q99KH8 431 aa20.22■□□□□ 0.83
Ercc1-203ENSMUST00000160369 Edc4Q3UJB9 1406 aaKnown RBP20.21■□□□□ 0.83
Ercc1-203ENSMUST00000160369 Ankrd36D3Z4K0 1415 aa20.2■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Dhx9O70133 1380 aaKnown RBP20.2■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Rimbp3Q3V0F0 1606 aa20.18■□□□□ 0.82
Ercc1-203ENSMUST00000160369 DroshaQ5HZJ0 1373 aaKnown RBP20.17■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Txndc2Q6P902 515 aa20.16■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Arid4bA2CG63 1314 aaKnown RBP20.16■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Kif13aQ9EQW7 1749 aa20.16■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Ppip5k1A2ARP1 1436 aa20.15■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Naip7Q9JIB3 1402 aa20.15■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Prdm2A2A7B5 1709 aaKnown RBP20.15■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Itsn1Q9Z0R4 1714 aa20.15■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Scn4aQ9ER60 1841 aa20.15■□□□□ 0.82
Ercc1-203ENSMUST00000160369 Pik3c2gO70167 1506 aa20.13■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Ncoa1P70365 1447 aa20.13■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Abca8aQ8K442 1620 aa20.13■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Scaf11E9PZM7 1456 aaKnown RBP20.12■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Gemin5Q8BX17 1502 aaKnown RBP20.12■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Phlpp1Q8CHE4 1687 aa20.11■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Rims2Q9EQZ7 1530 aa20.11■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Gm13695A2AK44 830 aa20.1■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Pip4k2bQ80XI4 416 aa20.1■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Mroh1E0CZ22 1640 aa20.09■□□□□ 0.81
Ercc1-203ENSMUST00000160369 Mroh3A0A1D5RM54 893 aa20.09■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 121.2 ms