RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 AdgbG3UZ78 1657 aa18.99■□□□□ 0.63
Syn1-202ENSMUST00000115345 Mre11Q61216 706 aa18.98■□□□□ 0.63
Syn1-202ENSMUST00000115345 Ttc37F8VPK0 1563 aa18.98■□□□□ 0.63
Syn1-202ENSMUST00000115345 Gys2Q8VCB3 704 aa18.95■□□□□ 0.62
Syn1-202ENSMUST00000115345 Cers3Q1A3B0 383 aa18.94■□□□□ 0.62
Syn1-202ENSMUST00000115345 Skap1Q3UUV5 355 aa18.94■□□□□ 0.62
Syn1-202ENSMUST00000115345 Mapkbp1Q6NS57 1503 aa18.94■□□□□ 0.62
Syn1-202ENSMUST00000115345 Gab3Q8BSM5 595 aa18.94■□□□□ 0.62
Syn1-202ENSMUST00000115345 Abca5Q8K448 1642 aa18.94■□□□□ 0.62
Syn1-202ENSMUST00000115345 Gtpbp6Q3U6U5 514 aa18.94■□□□□ 0.62
Syn1-202ENSMUST00000115345 Map3k1P53349 1493 aa18.93■□□□□ 0.62
Syn1-202ENSMUST00000115345 Pdia4P08003 638 aaKnown RBP18.92■□□□□ 0.62
Syn1-202ENSMUST00000115345 Nkx1-2P42580 305 aa18.92■□□□□ 0.62
Syn1-202ENSMUST00000115345 Carmil1Q6EDY6 1374 aa18.91■□□□□ 0.62
Syn1-202ENSMUST00000115345 Gm7298A0A0N4SVU1 1476 aa18.91■□□□□ 0.62
Syn1-202ENSMUST00000115345 Zhx1P70121 873 aa18.91■□□□□ 0.62
Syn1-202ENSMUST00000115345 Ripk4Q9ERK0 786 aa18.91■□□□□ 0.62
Syn1-202ENSMUST00000115345 MpndQ3TV65 487 aa18.9■□□□□ 0.62
Syn1-202ENSMUST00000115345 Jph4Q80WT0 628 aa18.89■□□□□ 0.62
Syn1-202ENSMUST00000115345 P3h3Q8CG70 732 aa18.89■□□□□ 0.61
Syn1-202ENSMUST00000115345 Arhgef11Q68FM7 1552 aa18.89■□□□□ 0.61
Syn1-202ENSMUST00000115345 Rrbp1Q99PL5 1605 aaKnown RBP18.87■□□□□ 0.61
Syn1-202ENSMUST00000115345 Lrrc9Q8CDN9 1456 aa18.86■□□□□ 0.61
Syn1-202ENSMUST00000115345 Tmed8Q3UHI4 326 aa18.86■□□□□ 0.61
Syn1-202ENSMUST00000115345 1700017N19RikA0A087WPJ1 469 aa18.84■□□□□ 0.61
Syn1-202ENSMUST00000115345 Kiaa0753Q6A000 959 aa18.84■□□□□ 0.61
Syn1-202ENSMUST00000115345 Polr1aO35134 1717 aaKnown RBP18.84■□□□□ 0.61
Syn1-202ENSMUST00000115345 Kdm5bQ80Y84 1544 aa18.84■□□□□ 0.61
Syn1-202ENSMUST00000115345 Kcng1A2BDX4 514 aa18.84■□□□□ 0.61
Syn1-202ENSMUST00000115345 Speer4f2E9Q366 295 aa18.82■□□□□ 0.6
Syn1-202ENSMUST00000115345 Ppp6r1Q7TSI3 856 aa18.82■□□□□ 0.6
Syn1-202ENSMUST00000115345 Chmp4cQ9D7F7 232 aa18.82■□□□□ 0.6
Syn1-202ENSMUST00000115345 Sh3bp1P55194 680 aa18.81■□□□□ 0.6
Syn1-202ENSMUST00000115345 Depdc5P61460 1591 aa18.81■□□□□ 0.6
Syn1-202ENSMUST00000115345 Plekhg3Q4VAC9 1341 aa18.81■□□□□ 0.6
Syn1-202ENSMUST00000115345 Ddrgk1Q80WW9 315 aa18.8■□□□□ 0.6
Syn1-202ENSMUST00000115345 Igf1rQ60751 1373 aa18.8■□□□□ 0.6
Syn1-202ENSMUST00000115345 Zfyve16Q80U44 1528 aa18.8■□□□□ 0.6
Syn1-202ENSMUST00000115345 Npm2Q80W85 207 aa18.79■□□□□ 0.6
Syn1-202ENSMUST00000115345 Alpk3Q924C5 1678 aa18.79■□□□□ 0.6
Syn1-202ENSMUST00000115345 Arhgap4B1AUY3 965 aa18.79■□□□□ 0.6
Syn1-202ENSMUST00000115345 Arhgap35Q91YM2 1499 aa18.78■□□□□ 0.6
Syn1-202ENSMUST00000115345 Cald1E9QA15 768 aaKnown RBP18.78■□□□□ 0.6
Syn1-202ENSMUST00000115345 ErmnQ5EBJ4 281 aa18.78■□□□□ 0.6
Syn1-202ENSMUST00000115345 Dnai1Q8C0M8 701 aa18.78■□□□□ 0.6
Syn1-202ENSMUST00000115345 Cwc22Q8C5N3 908 aaKnown RBP18.78■□□□□ 0.6
Syn1-202ENSMUST00000115345 Fam114a1Q9D281 569 aa18.76■□□□□ 0.59
Syn1-202ENSMUST00000115345 Eid3Q3V124 375 aa18.76■□□□□ 0.59
Syn1-202ENSMUST00000115345 Gpatch11Q3UFS4 262 aa18.75■□□□□ 0.59
Syn1-202ENSMUST00000115345 WrnO09053 1401 aa18.75■□□□□ 0.59
Syn1-202ENSMUST00000115345 Sh3bp5Q9Z131 463 aa18.75■□□□□ 0.59
Syn1-202ENSMUST00000115345 Wdr7Q920I9 1489 aa18.75■□□□□ 0.59
Syn1-202ENSMUST00000115345 Rangap1P46061 589 aaKnown RBP18.75■□□□□ 0.59
Syn1-202ENSMUST00000115345 Plin1Q8CGN5 517 aa18.75■□□□□ 0.59
Syn1-202ENSMUST00000115345 Znf608Q56A10 1511 aa18.75■□□□□ 0.59
Syn1-202ENSMUST00000115345 Gse1Q3U3C9 1213 aa18.74■□□□□ 0.59
Syn1-202ENSMUST00000115345 NhsB1AV60 1647 aa18.74■□□□□ 0.59
Syn1-202ENSMUST00000115345 Cul7Q8VE73 1689 aa18.73■□□□□ 0.59
Syn1-202ENSMUST00000115345 MycnP03966 462 aaKnown RBP18.73■□□□□ 0.59
Syn1-202ENSMUST00000115345 Kcnh8P59111 1102 aa18.72■□□□□ 0.59
Syn1-202ENSMUST00000115345 Erich4Q3UNU4 136 aa18.72■□□□□ 0.59
Syn1-202ENSMUST00000115345 Fndc1E9Q043 1732 aa18.72■□□□□ 0.59
Syn1-202ENSMUST00000115345 Arid3cA6PWV5 409 aa18.71■□□□□ 0.59
Syn1-202ENSMUST00000115345 Spryd3E9Q9B3 442 aa18.7■□□□□ 0.58
Syn1-202ENSMUST00000115345 FanciQ8K368 1330 aa18.7■□□□□ 0.58
Syn1-202ENSMUST00000115345 Cux1P53564 1515 aa18.7■□□□□ 0.58
Syn1-202ENSMUST00000115345 Erbb4Q61527 1308 aa18.69■□□□□ 0.58
Syn1-202ENSMUST00000115345 AglF8VPN4 1532 aa18.67■□□□□ 0.58
Syn1-202ENSMUST00000115345 VgfQ0VGU4 617 aa18.67■□□□□ 0.58
Syn1-202ENSMUST00000115345 Ano8Q6PB70 1060 aa18.64■□□□□ 0.58
Syn1-202ENSMUST00000115345 Trim44Q9QXA7 346 aa18.64■□□□□ 0.58
Syn1-202ENSMUST00000115345 Smg6P61406 1418 aaKnown RBP18.64■□□□□ 0.57
Syn1-202ENSMUST00000115345 Htatsf1Q8BGC0 757 aa18.63■□□□□ 0.57
Syn1-202ENSMUST00000115345 Ccdc141E9Q8Q6 1531 aa18.62■□□□□ 0.57
Syn1-202ENSMUST00000115345 Sin3aQ60520 1274 aaKnown RBP18.62■□□□□ 0.57
Syn1-202ENSMUST00000115345 Fyco1Q8VDC1 1437 aa18.61■□□□□ 0.57
Syn1-202ENSMUST00000115345 Lmod3E9QA62 571 aa18.61■□□□□ 0.57
Syn1-202ENSMUST00000115345 Ccdc94Q9D6J3 314 aa18.61■□□□□ 0.57
Syn1-202ENSMUST00000115345 Arhgap31A6X8Z5 1425 aa18.6■□□□□ 0.57
Syn1-202ENSMUST00000115345 Erich6D3Z6S9 713 aa18.6■□□□□ 0.57
Syn1-202ENSMUST00000115345 Ppm1gQ61074 542 aa18.6■□□□□ 0.57
Syn1-202ENSMUST00000115345 Mrvi1Q9WUX5 899 aaKnown RBP18.6■□□□□ 0.57
Syn1-202ENSMUST00000115345 Atp10dQ8K2X1 1416 aa18.6■□□□□ 0.57
Syn1-202ENSMUST00000115345 Fam50aQ9WV03 339 aaKnown RBP18.59■□□□□ 0.57
Syn1-202ENSMUST00000115345 Clip1Q922J3 1391 aa18.59■□□□□ 0.57
Syn1-202ENSMUST00000115345 Fam13bQ8K2H3 851 aa18.59■□□□□ 0.57
Syn1-202ENSMUST00000115345 Kiaa1210E9Q0C6 1637 aa18.59■□□□□ 0.57
Syn1-202ENSMUST00000115345 Il4rP16382 810 aa18.59■□□□□ 0.57
Syn1-202ENSMUST00000115345 Prdm4Q80V63 803 aa18.59■□□□□ 0.57
Syn1-202ENSMUST00000115345 E2f4Q8R0K9 410 aa18.59■□□□□ 0.57
Syn1-202ENSMUST00000115345 Gcc2Q8CHG3 1679 aa18.58■□□□□ 0.57
Syn1-202ENSMUST00000115345 Esx1O88933 382 aa18.58■□□□□ 0.57
Syn1-202ENSMUST00000115345 Nol7Q9D7Z3 254 aaKnown RBP18.57■□□□□ 0.56
Syn1-202ENSMUST00000115345 Ercc6lQ8BHK9 1240 aa18.57■□□□□ 0.56
Syn1-202ENSMUST00000115345 Ssr1Q9CY50 286 aaKnown RBP18.57■□□□□ 0.56
Syn1-202ENSMUST00000115345 Dhx16G3X8X0 1044 aaKnown RBP18.56■□□□□ 0.56
Syn1-202ENSMUST00000115345 Gtpbp4Q99ME9 634 aaKnown RBP18.55■□□□□ 0.56
Syn1-202ENSMUST00000115345 Mroh2aD3Z750 1679 aa18.55■□□□□ 0.56
Syn1-202ENSMUST00000115345 Igsf3Q6ZQA6 1194 aa18.55■□□□□ 0.56
Syn1-202ENSMUST00000115345 PtmsQ9D0J8 101 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms