RNA–Protein interactions for RNA: ENSMUST00000112577.7

Pkp4-203, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,222 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-203ENSMUST00000112577 Pabpn1Q8CCS6 302 aaKnown RBP11.33□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Unc13aQ4KUS2 1712 aa11.33□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Map3k5O35099 1380 aa11.33□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Trim26Q99PN3 545 aa11.33□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Rangap1P46061 589 aaKnown RBP11.33□□□□□ -0.6
Pkp4-203ENSMUST00000112577 PnisrA2AJT4 805 aaKnown RBP11.32□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Speer4f1Q9D5Q6 258 aa11.32□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Lmtk2Q3TYD6 1471 aa11.32□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Slc4a2P13808 1237 aaKnown RBP11.32□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Fam184bQ0KK56 942 aa11.31□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Mapk8ip3Q9ESN9 1337 aa11.31□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Rapgef6Q5NCJ1 1609 aa11.31□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Zscan10Q3URR7 782 aa11.31□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Camsap2Q8C1B1 1461 aa11.31□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Slc4a3P16283 1227 aa11.3□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Shroom2A2ALU4 1481 aa11.3□□□□□ -0.6
Pkp4-203ENSMUST00000112577 ErbinQ80TH2 1402 aa11.3□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Stk26Q99JT2 416 aa11.3□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Usp40Q8BWR4 1235 aa11.3□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Rsph4aQ8BYM7 716 aa11.3□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Supt16hQ920B9 1047 aa11.29□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Golga2Q921M4 999 aa11.29□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Nup160Q9Z0W3 1402 aaKnown RBP11.29□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Rock1P70335 1354 aa11.29□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Pik3c2gO70167 1506 aa11.28□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Rpgrip1lQ8CG73 1264 aa11.27□□□□□ -0.6
Pkp4-203ENSMUST00000112577 DroshaQ5HZJ0 1373 aaKnown RBP11.27□□□□□ -0.6
Pkp4-203ENSMUST00000112577 Trim30dE9PWL0 497 aa11.27□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Igf1rQ60751 1373 aa11.27□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Ncoa1P70365 1447 aa11.27□□□□□ -0.61
Pkp4-203ENSMUST00000112577 CrbnQ8C7D2 445 aa11.27□□□□□ -0.61
Pkp4-203ENSMUST00000112577 ArxO35085 564 aa11.26□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Fancd2Q80V62 1450 aa11.26□□□□□ -0.61
Pkp4-203ENSMUST00000112577 CanxP35564 591 aaKnown RBP11.25□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Abca5Q8K448 1642 aa11.25□□□□□ -0.61
Pkp4-203ENSMUST00000112577 CenpjQ569L8 1344 aa11.25□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Nolc1E9Q5C9 702 aaKnown RBP11.25□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Kdm5bQ80Y84 1544 aa11.24□□□□□ -0.61
Pkp4-203ENSMUST00000112577 U2af1Q9D883 239 aaKnown RBP11.24□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Kif7B7ZNG0 1348 aa11.23□□□□□ -0.61
Pkp4-203ENSMUST00000112577 NudcO35685 332 aaKnown RBP11.23□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Esx1O88933 382 aa11.23□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Polr3aB2RXC6 1390 aa11.22□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Asxl1P59598 1514 aa11.22□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Chmp5Q9D7S9 219 aa11.22□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Adamts12Q811B3 1600 aa11.22□□□□□ -0.61
Pkp4-203ENSMUST00000112577 B4galnt3Q6L8S8 986 aa11.21□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Dbr1Q923B1 550 aa11.21□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Hsp90ab1P11499 724 aaKnown RBP11.21□□□□□ -0.61
Pkp4-203ENSMUST00000112577 Arhgef40Q3UPH7 1517 aa11.2□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Puf60Q3UEB3 564 aaKnown RBP11.2□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Prex2Q3LAC4 1598 aa11.2□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Zfp777B9EKF4 885 aa11.2□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Utp14aQ640M1 767 aaKnown RBP11.2□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Iqcf3Q9D498 203 aa11.2□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Washc2Q6PGL7 1334 aa11.19□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Q7TT23 1179 aa11.19□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Pbrm1Q8BSQ9 1634 aaKnown RBP11.19□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Ppm1gQ61074 542 aa11.19□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Atp10dQ8K2X1 1416 aa11.19□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Gm6268A2A3U9 297 aa11.18□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Fgd1P52734 960 aa11.18□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Adcy10Q8C0T9 1614 aa11.18□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Arhgef12Q8R4H2 1543 aaKnown RBP11.18□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Kdm3bQ6ZPY7 1562 aa11.18□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Gcc2Q8CHG3 1679 aa11.18□□□□□ -0.62
Pkp4-203ENSMUST00000112577 EspnQ9ET47 871 aa11.17□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Psme1P97371 249 aa11.17□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Chmp4bQ9D8B3 224 aaKnown RBP11.17□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Ccdc27Q3V036 639 aa11.17□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Txndc2Q6P902 515 aa11.17□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Shq1Q7TMX5 569 aa11.17□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Kcna4Q61423 654 aa11.17□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Ralbp1Q62172 648 aa11.17□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Adgrb2Q8CGM1 1561 aa11.16□□□□□ -0.62
Pkp4-203ENSMUST00000112577 NgefQ8CHT1 710 aa11.16□□□□□ -0.62
Pkp4-203ENSMUST00000112577 GsdmaQ9EST1 446 aa11.16□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Ppp2r1aQ76MZ3 589 aa11.15□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Hsp90aa1P07901 733 aaKnown RBP11.15□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Tsen2Q6P7W5 460 aa11.15□□□□□ -0.62
Pkp4-203ENSMUST00000112577 Trappc8E9PWG2 1437 aa11.15□□□□□ -0.62
Pkp4-203ENSMUST00000112577 PrxO55103 1391 aa11.14□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Rab3gap2Q8BMG7 1366 aa11.14□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Zfp444Q3TDV8 331 aaKnown RBP11.14□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Ccdc9Q8VC31 543 aaKnown RBP11.14□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Ttc21bQ0HA38 1315 aa11.14□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Birc3O08863 600 aa11.14□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Ksr2Q3UVC0 959 aa11.14□□□□□ -0.63
Pkp4-203ENSMUST00000112577 AI481877A2ALV5 1481 aa11.13□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Wdr7Q920I9 1489 aa11.13□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Map7O88735 730 aa11.12□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Ccar1Q8CH18 1146 aaKnown RBP11.12□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Armcx1Q9CX83 456 aa11.12□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Atp7aQ64430 1491 aa11.12□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Mapkbp1Q6NS57 1503 aa11.12□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Ipo9Q91YE6 1041 aa11.12□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Mink1Q9JM52 1308 aa11.12□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Arhgef11Q68FM7 1552 aa11.11□□□□□ -0.63
Pkp4-203ENSMUST00000112577 Ylpm1Q9R0I7 1386 aaKnown RBP11.11□□□□□ -0.63
Pkp4-203ENSMUST00000112577 4930567H17RikQ3V0K5 233 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms