RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Tnpo1Q8BFY9 898 aaKnown RBP9.76□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Ssh1Q76I79 1042 aa9.76□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Camsap1A2AHC3 1581 aa9.76□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Ripk4Q9ERK0 786 aa9.75□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Mroh2bQ7M6Y6 1581 aa9.75□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Cul9Q80TT8 1865 aa9.75□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Sptbn5F6UCX4 1208 aa9.75□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Mapk8ip3Q9ESN9 1337 aa9.75□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Plcb2A3KGF7 1181 aa9.75□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Ccnb3Q810T2 1396 aa9.75□□□□□ -0.85
Bdnf-209ENSMUST00000111050 TnnQ80Z71 1560 aa9.74□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Esx1O88933 382 aa9.74□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Erbb4Q61527 1308 aa9.74□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Tnnt2P50752 301 aa9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Ddrgk1Q80WW9 315 aa9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Grwd1Q810D6 446 aaKnown RBP9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Cux1P53564 1515 aa9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Aebp1Q640N1 1128 aa9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Fam43aQ8BUP8 424 aa9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Abca5Q8K448 1642 aa9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Gm1043A0A140LJC2 1431 aa9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Arid4bA2CG63 1314 aaKnown RBP9.73□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Mug1P28665 1476 aa9.72□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Kif16bB1AVY7 1312 aa9.72□□□□□ -0.85
Bdnf-209ENSMUST00000111050 CatipB9EKE5 520 aa9.72□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Tspyl2Q7TQI8 677 aa9.72□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Tmc1Q8R4P5 757 aa9.72□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Fhod3Q76LL6 1578 aa9.72□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Mtus2Q3UHD3 1353 aa9.71□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Vsig10D3YX43 558 aa9.71□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Dhx16G3X8X0 1044 aaKnown RBP9.71□□□□□ -0.85
Bdnf-209ENSMUST00000111050 KarsQ99MN1 595 aaKnown RBP9.71□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Cabp1Q9JLK7 227 aa9.71□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Kif21bQ9QXL1 1668 aa9.71□□□□□ -0.86
Bdnf-209ENSMUST00000111050 SynmQ70IV5 1561 aa9.71□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Soga1E1U8D0 1418 aa9.7□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Setbp1Q9Z180 1582 aa9.7□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Gys2Q8VCB3 704 aa9.7□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Catsper2A2ARP9 588 aa9.69□□□□□ -0.86
Bdnf-209ENSMUST00000111050 DekQ7TNV0 380 aaKnown RBP9.69□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Fbxo2Q80UW2 297 aa9.69□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Ythdc1E9Q5K9 736 aaKnown RBP9.69□□□□□ -0.86
Bdnf-209ENSMUST00000111050 VgfQ0VGU4 617 aa9.69□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Naip6Q9JIB6 1403 aa9.69□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Zmym4A2A791 1549 aaKnown RBP9.68□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Peg3Q3URU2 1571 aa9.68□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Neurod2Q62414 383 aa9.68□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Rabep1O35551 862 aa9.67□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Erich6bQ9D4S6 220 aa9.67□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Dhx9O70133 1380 aaKnown RBP9.67□□□□□ -0.86
Bdnf-209ENSMUST00000111050 LrpprcQ6PB66 1392 aaKnown RBP9.67□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Mug2P28666 1451 aa9.67□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Pik3c2gO70167 1506 aa9.66□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Dnajc14Q921R4 703 aa9.66□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Plekhh1Q80TI1 1356 aa9.66□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Lekr1B2RVN1 116 aa9.66□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Gse1Q3U3C9 1213 aa9.65□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Zmym3Q9JLM4 1370 aa9.65□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Ift140E9PY46 1464 aa9.65□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Rock1P70335 1354 aa9.65□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Iqgap2Q3UQ44 1575 aa9.65□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Pank1Q8K4K6 548 aa9.65□□□□□ -0.86
Bdnf-209ENSMUST00000111050 Carmil1Q6EDY6 1374 aa9.65□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Lmod3E9QA62 571 aa9.65□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Mknk2Q8CDB0 459 aa9.65□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Mfap1aC0HKD8 439 aaKnown RBP9.64□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Mfap1bC0HKD9 439 aaKnown RBP9.64□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Speer4f1Q9D5Q6 258 aa9.64□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Arhgef12Q8R4H2 1543 aaKnown RBP9.64□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Ttc41Q692V3 1318 aa9.64□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Urb2E9Q7L1 1524 aaKnown RBP9.63□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Rlbp1Q9Z275 317 aa9.63□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Kif15Q6P9L6 1387 aa9.63□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Pnmal2G3X9N3 661 aa9.63□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Terf2O35144 541 aa9.63□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Ppp2r3aB2RXC8 1150 aa9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Kif27Q7M6Z4 1394 aa9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Tbc1d32Q3URV1 1296 aa9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Pank3Q8R2W9 370 aa9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Inpp5dQ9ES52 1191 aa9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Mbd5B1AYB6 1498 aa9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Cdk13Q69ZA1 1511 aaKnown RBP9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Nectin2P32507 530 aa9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Rfx1P48377 963 aa9.62□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Ush1cQ9ES64 910 aa9.61□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Grin2bQ01097 1482 aa9.61□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Frmpd1A2AKB4 1549 aa9.61□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Ddit3P35639 168 aa9.6□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Isy1Q69ZQ2 285 aaKnown RBP9.6□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Nsfl1cQ9CZ44 370 aaKnown RBP9.6□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Kif14L0N7N1 1674 aaKnown RBP9.6□□□□□ -0.87
Bdnf-209ENSMUST00000111050 CadpsQ80TJ1 1355 aa9.6□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Ccdc30Q8BVF4 654 aa9.6□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Zhx1P70121 873 aa9.59□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Cers3Q1A3B0 383 aa9.59□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Trak1Q6PD31 939 aa9.59□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Ylpm1Q9R0I7 1386 aaKnown RBP9.59□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Cux2P70298 1426 aa9.59□□□□□ -0.87
Bdnf-209ENSMUST00000111050 Duxf3A0A0N4SV92 674 aa9.58□□□□□ -0.88
Bdnf-209ENSMUST00000111050 Fam13bQ8K2H3 851 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms