RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Rrp7aQ9D1C9 280 aaKnown RBP16.98■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Nolc1E9Q5C9 702 aaKnown RBP16.97■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Kidins220E9Q9B7 1793 aa16.95■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Igf1rQ60751 1373 aa16.95■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Dot1lQ6XZL8 1540 aa16.95■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Ythdc2B2RR83 1445 aaKnown RBP16.95■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Stra8P70278 393 aa16.94■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Rgl3Q3UYI5 709 aa16.94■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Mug2P28666 1451 aa16.93■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Smg6P61406 1418 aaKnown RBP16.93■□□□□ 0.3
Vamp1-203ENSMUST00000100942 PtprtQ99M80 1454 aa16.91■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Clstn2Q9ER65 966 aa16.91■□□□□ 0.3
Vamp1-203ENSMUST00000100942 AI481877A2ALV5 1481 aa16.9■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Dapk1Q80YE7 1442 aa16.9■□□□□ 0.3
Vamp1-203ENSMUST00000100942 Iqgap1Q9JKF1 1657 aaKnown RBP16.89■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Amer1Q7TS75 1132 aa16.89■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Prdm16A2A935 1275 aa16.88■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Znf710Q3U288 666 aa16.88■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Abca17E9PX95 1733 aa16.88■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Calr4Q3TQS0 420 aa16.88■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Cd109Q8R422 1442 aa16.87■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Rock1P70335 1354 aa16.87■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Cdk13Q69ZA1 1511 aaKnown RBP16.87■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Zfyve16Q80U44 1528 aa16.87■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Robo2Q7TPD3 1470 aa16.87■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Myom3A2ABU4 1439 aa16.86■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Atp7aQ64430 1491 aa16.86■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Zbtb7cQ8VCZ7 619 aa16.86■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Cpsf1Q9EPU4 1441 aaKnown RBP16.85■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Naip6Q9JIB6 1403 aa16.85■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Spag9Q58A65 1321 aaKnown RBP16.85■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Gapvd1Q6PAR5 1458 aa16.85■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Abca9Q8K449 1623 aa16.85■□□□□ 0.29
Vamp1-203ENSMUST00000100942 P3h3Q8CG70 732 aa16.84■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Xrn1P97789 1719 aaKnown RBP16.84■□□□□ 0.29
Vamp1-203ENSMUST00000100942 ShprhQ7TPQ3 1674 aa16.84■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Rundc1Q0VDN7 615 aa16.83■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Usp54Q8BL06 1588 aaKnown RBP16.83■□□□□ 0.29
Vamp1-203ENSMUST00000100942 Map3k5O35099 1380 aa16.83■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Tarbp1E9Q368 1579 aa16.83■□□□□ 0.28
Vamp1-203ENSMUST00000100942 RalgapbQ8BQZ4 1484 aa16.82■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Kif1bQ60575 1816 aaKnown RBP16.82■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Polr3aB2RXC6 1390 aa16.81■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Cwc22Q8C5N3 908 aaKnown RBP16.81■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Washc2Q6PGL7 1334 aa16.8■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Ppip5k1A2ARP1 1436 aa16.8■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Ppp4r2Q0VGB7 417 aa16.8■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Grwd1Q810D6 446 aaKnown RBP16.8■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Cep170Q6A065 1588 aa16.79■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Pde4cQ3UEI1 686 aa16.79■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Plekhg5Q66T02 1073 aa16.78■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Card11Q8CIS0 1159 aa16.78■□□□□ 0.28
Vamp1-203ENSMUST00000100942 Myo5cE9Q1F5 1742 aa16.76■□□□□ 0.27
Vamp1-203ENSMUST00000100942 Nos1Q9Z0J4 1429 aa16.74■□□□□ 0.27
Vamp1-203ENSMUST00000100942 Edc4Q3UJB9 1406 aaKnown RBP16.74■□□□□ 0.27
Vamp1-203ENSMUST00000100942 Arid3cA6PWV5 409 aa16.74■□□□□ 0.27
Vamp1-203ENSMUST00000100942 Gm13695A2AK44 830 aa16.73■□□□□ 0.27
Vamp1-203ENSMUST00000100942 Supt16hQ920B9 1047 aa16.73■□□□□ 0.27
Vamp1-203ENSMUST00000100942 Adamts13Q769J6 1426 aa16.73■□□□□ 0.27
Vamp1-203ENSMUST00000100942 Pabpn1Q8CCS6 302 aaKnown RBP16.71■□□□□ 0.27
Vamp1-203ENSMUST00000100942 Nsd2Q8BVE8 1365 aa16.7■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Slc4a3P16283 1227 aa16.7■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Fndc1E9Q043 1732 aa16.69■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Setd1aE9PYH6 1716 aa16.69■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Rock2P70336 1388 aa16.68■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Lemd3Q9WU40 921 aa16.67■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Hdac5Q9Z2V6 1113 aa16.67■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Znf518aB2RRF6 1478 aaKnown RBP16.67■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Tmem131lQ3U3D7 1597 aa16.66■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Ylpm1Q9R0I7 1386 aaKnown RBP16.66■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Tulp4Q9JIL5 1547 aa16.65■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Wwc2Q6NXJ0 1187 aa16.64■□□□□ 0.26
Vamp1-203ENSMUST00000100942 Kif3bQ61771 747 aa16.64■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Exoc6Q8R313 802 aa16.64■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Tubgcp6G5E8P0 1769 aa16.64■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Abca6Q8K441 1624 aa16.64■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Kdm5cP41230 1554 aa16.64■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Slc4a2P13808 1237 aaKnown RBP16.64■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Mrs2Q5NCE8 434 aa16.64■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Ifit1bl1D3Z6F0 470 aa16.63■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Pak3Q61036 559 aa16.63■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Ak9G3UYQ4 1894 aa16.63■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Uggt2E9Q4X2 1504 aa16.63■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Topbp1Q6ZQF0 1515 aa16.62■□□□□ 0.25
Vamp1-203ENSMUST00000100942 AnkarA2RT91 1465 aa16.62■□□□□ 0.25
Vamp1-203ENSMUST00000100942 PnisrA2AJT4 805 aaKnown RBP16.61■□□□□ 0.25
Vamp1-203ENSMUST00000100942 OvosQ3UU35 1456 aa16.61■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Abcc6Q9R1S7 1498 aa16.61■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Mroh3A0A1D5RM54 893 aa16.6■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Iqgap3F8VQ29 1632 aa16.59■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Gm156Q58A37 223 aa16.59■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Wdr43Q6ZQL4 677 aaKnown RBP16.59■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Prex1Q69ZK0 1650 aa16.59■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Ccdc9Q8VC31 543 aaKnown RBP16.59■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Plch2A2AP18 1501 aa16.58■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Atp10aO54827 1508 aa16.58■□□□□ 0.25
Vamp1-203ENSMUST00000100942 Ttc21bQ0HA38 1315 aa16.58■□□□□ 0.24
Vamp1-203ENSMUST00000100942 AglF8VPN4 1532 aa16.58■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Upf2A2AT37 1269 aaKnown RBP16.56■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Sall3Q62255 1320 aa16.56■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms