RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Cdk13Q69ZA1 1511 aaKnown RBP15.39■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Rusc2Q80U22 1514 aa15.38■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Arhgef11Q68FM7 1552 aa15.38■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Os9Q8K2C7 672 aa15.38■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Naip6Q9JIB6 1403 aa15.37■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Zscan21Q07231 555 aa15.37■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Ccdc141E9Q8Q6 1531 aa15.36■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Fgd6Q69ZL1 1399 aa15.36■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Wdr7Q920I9 1489 aa15.35■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Mak16Q8BGS0 296 aaKnown RBP15.35■□□□□ 0.05
Col9a1-202ENSMUST00000088349 B4galnt3Q6L8S8 986 aa15.35■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Amer1Q7TS75 1132 aa15.35■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Fam163aQ8CAA5 168 aa15.34■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Supt6hQ62383 1726 aaKnown RBP15.34■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Mbd5B1AYB6 1498 aa15.34■□□□□ 0.05
Col9a1-202ENSMUST00000088349 Arid3cA6PWV5 409 aa15.32■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Pbrm1Q8BSQ9 1634 aaKnown RBP15.32■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Arhgef12Q8R4H2 1543 aaKnown RBP15.32■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Cdc42bpaQ3UU96 1719 aa15.32■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Trappc8E9PWG2 1437 aa15.31■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Map3k5O35099 1380 aa15.31■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Hdac5Q9Z2V6 1113 aa15.31■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Mroh3A0A1D5RM54 893 aa15.31■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Mroh2aD3Z750 1679 aa15.31■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Hsp90aa1P07901 733 aaKnown RBP15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Dbr1Q923B1 550 aa15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Kank1E9Q238 1360 aa15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Lamc1P02468 1607 aaKnown RBP15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 DaxxO35613 739 aa15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Pank3Q8R2W9 370 aa15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Inpp5dQ9ES52 1191 aa15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Map3k4O08648 1597 aa15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Eif4g3Q80XI3 1579 aaKnown RBP15.3■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Apbb1Q9QXJ1 710 aa15.29■□□□□ 0.04
Col9a1-202ENSMUST00000088349 4933416C03RikQ3V063 378 aa15.29■□□□□ 0.04
Col9a1-202ENSMUST00000088349 RalgapbQ8BQZ4 1484 aa15.28■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Rock2P70336 1388 aa15.28■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Esx1O88933 382 aa15.28■□□□□ 0.04
Col9a1-202ENSMUST00000088349 CrbnQ8C7D2 445 aa15.27■□□□□ 0.04
Col9a1-202ENSMUST00000088349 Kiaa1551Q5DTW7 1521 aa15.27■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Sall3Q62255 1320 aa15.27■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Prkrip1Q9CWV6 186 aaKnown RBP15.26■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Stk24Q99KH8 431 aa15.25■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Iqcf3Q9D498 203 aa15.25■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Ttll13A4Q9F6 804 aa15.25■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Arhgap5P97393 1501 aa15.25■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Gm14025A2AP89 1413 aa15.24■□□□□ 0.03
Col9a1-202ENSMUST00000088349 CanxP35564 591 aaKnown RBP15.23■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Ssh2Q5SW75 1423 aa15.23■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Cd109Q8R422 1442 aa15.23■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Clstn2Q9ER65 966 aa15.23■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Polr3aB2RXC6 1390 aa15.22■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Spag9Q58A65 1321 aaKnown RBP15.21■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Ecm2Q5FW85 670 aa15.21■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Cnga1P29974 684 aa15.21■□□□□ 0.03
Col9a1-202ENSMUST00000088349 Pde4cQ3UEI1 686 aa15.2■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Mapkbp1Q6NS57 1503 aa15.2■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Kif21bQ9QXL1 1668 aa15.2■□□□□ 0.02
Col9a1-202ENSMUST00000088349 PrxO55103 1391 aa15.2■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Slc4a1apE9PX68 744 aa15.2■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Asxl1P59598 1514 aa15.19■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Dnmt1P13864 1620 aaKnown RBP15.19■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Cpsf1Q9EPU4 1441 aaKnown RBP15.18■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Zscan10Q3URR7 782 aa15.18■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Kif3bQ61771 747 aa15.18■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Neurod2Q62414 383 aa15.18■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Mlh3A0A1Y7VMP7 1443 aa15.18■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Zcchc11B2RX14 1644 aaKnown RBP15.18■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Atp7aQ64430 1491 aa15.17■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Rock1P70335 1354 aa15.16■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Abcc1O35379 1528 aa15.16■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Pabpn1Q8CCS6 302 aaKnown RBP15.15■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Kif16bB1AVY7 1312 aa15.15■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Tmf1B9EKI3 1091 aa15.15■□□□□ 0.02
Col9a1-202ENSMUST00000088349 Fancd2Q80V62 1450 aa15.14■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Dot1lQ6XZL8 1540 aa15.14■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Trpm2Q91YD4 1506 aa15.14■□□□□ 0.01
Col9a1-202ENSMUST00000088349 ArxO35085 564 aa15.14■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Gtf3c3Q3TMP1 882 aa15.14■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Sart3Q9JLI8 962 aaKnown RBP15.14■□□□□ 0.01
Col9a1-202ENSMUST00000088349 DroshaQ5HZJ0 1373 aaKnown RBP15.14■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Gm20521D3Z5F7 333 aa15.13■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Rwdd1Q9CQK7 243 aa15.13■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Chmp5Q9D7S9 219 aa15.13■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Znf608Q56A10 1511 aa15.13■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Irx3P81067 507 aa15.12■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Ythdc2B2RR83 1445 aaKnown RBP15.12■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Zmym4A2A791 1549 aaKnown RBP15.12■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Fan1Q69ZT1 1020 aa15.12■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Srcin1Q9QWI6 1250 aa15.12■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Nlrp6Q91WS2 869 aa15.11■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Speer4f1Q9D5Q6 258 aa15.11■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Ppp2r1aQ76MZ3 589 aa15.11■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Caskin1Q6P9K8 1431 aa15.11■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Mink1Q9JM52 1308 aa15.11■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Ccdc9Q8VC31 543 aaKnown RBP15.1■□□□□ 0.01
Col9a1-202ENSMUST00000088349 EspnQ9ET47 871 aa15.1■□□□□ 0.01
Col9a1-202ENSMUST00000088349 PtprgQ05909 1442 aa15.09■□□□□ 0.01
Col9a1-202ENSMUST00000088349 4930567H17RikQ3V0K5 233 aa15.09■□□□□ 0.01
Col9a1-202ENSMUST00000088349 Trim30dE9PWL0 497 aa15.08■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms