RNA–Protein interactions for RNA: ENSMUST00000077672.11

Col4a3bp-201, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3bp, Length 2,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-201ENSMUST00000077672 Kcnh8P59111 1102 aa23.45■■□□□ 1.34
Col4a3bp-201ENSMUST00000077672 Cpsf1Q9EPU4 1441 aaKnown RBP23.44■■□□□ 1.34
Col4a3bp-201ENSMUST00000077672 Mlh3A0A1Y7VMP7 1443 aa23.43■■□□□ 1.34
Col4a3bp-201ENSMUST00000077672 Rock2P70336 1388 aa23.43■■□□□ 1.34
Col4a3bp-201ENSMUST00000077672 Map4P27546 1125 aaKnown RBP23.41■■□□□ 1.34
Col4a3bp-201ENSMUST00000077672 Prex2Q3LAC4 1598 aa23.41■■□□□ 1.34
Col4a3bp-201ENSMUST00000077672 Ccdc141E9Q8Q6 1531 aa23.4■■□□□ 1.34
Col4a3bp-201ENSMUST00000077672 Mroh2aD3Z750 1679 aa23.39■■□□□ 1.33
Col4a3bp-201ENSMUST00000077672 Polr3aB2RXC6 1390 aa23.38■■□□□ 1.33
Col4a3bp-201ENSMUST00000077672 Caskin1Q6P9K8 1431 aa23.37■■□□□ 1.33
Col4a3bp-201ENSMUST00000077672 Kank1E9Q238 1360 aa23.36■■□□□ 1.33
Col4a3bp-201ENSMUST00000077672 Erbb3Q61526 1339 aa23.36■■□□□ 1.33
Col4a3bp-201ENSMUST00000077672 Rpgrip1lQ8CG73 1264 aa23.35■■□□□ 1.33
Col4a3bp-201ENSMUST00000077672 Plcd4Q8K3R3 807 aa23.33■■□□□ 1.33
Col4a3bp-201ENSMUST00000077672 Asxl1P59598 1514 aa23.33■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Dot1lQ6XZL8 1540 aa23.32■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Iqcf3Q9D498 203 aa23.31■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Iqgap1Q9JKF1 1657 aaKnown RBP23.3■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 PtprgQ05909 1442 aa23.3■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Rock1P70335 1354 aa23.29■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Fmn2Q9JL04 1578 aa23.28■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Mink1Q9JM52 1308 aa23.28■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Zscan21Q07231 555 aa23.28■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Zfp444Q3TDV8 331 aaKnown RBP23.28■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Gapvd1Q6PAR5 1458 aa23.27■■□□□ 1.32
Col4a3bp-201ENSMUST00000077672 Mak16Q8BGS0 296 aaKnown RBP23.24■■□□□ 1.31
Col4a3bp-201ENSMUST00000077672 Zcchc11B2RX14 1644 aaKnown RBP23.24■■□□□ 1.31
Col4a3bp-201ENSMUST00000077672 Q7TT23 1179 aa23.24■■□□□ 1.31
Col4a3bp-201ENSMUST00000077672 Lrrc9Q8CDN9 1456 aa23.23■■□□□ 1.31
Col4a3bp-201ENSMUST00000077672 Anp32bQ9EST5 272 aaKnown RBP23.23■■□□□ 1.31
Col4a3bp-201ENSMUST00000077672 Adgrl2Q8JZZ7 1487 aa23.23■■□□□ 1.31
Col4a3bp-201ENSMUST00000077672 Ssh2Q5SW75 1423 aa23.21■■□□□ 1.31
Col4a3bp-201ENSMUST00000077672 Kdm5cP41230 1554 aa23.2■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Clstn2Q9ER65 966 aa23.2■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Tubgcp6G5E8P0 1769 aa23.2■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Fkbp15Q6P9Q6 1216 aaKnown RBP23.19■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Zbtb4Q5F293 982 aa23.19■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Zbtb7cQ8VCZ7 619 aa23.19■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Dnajc5bQ9CQ94 199 aa23.19■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Jph4Q80WT0 628 aa23.17■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Rrp7aQ9D1C9 280 aaKnown RBP23.17■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Ipo4Q8VI75 1082 aa23.17■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Prkrip1Q9CWV6 186 aaKnown RBP23.17■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Atp7aQ64430 1491 aa23.15■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Setd1aE9PYH6 1716 aa23.15■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Eif4g3Q80XI3 1579 aaKnown RBP23.15■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Cd109Q8R422 1442 aa23.15■■□□□ 1.3
Col4a3bp-201ENSMUST00000077672 Tarbp1E9Q368 1579 aa23.14■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Fancd2Q80V62 1450 aa23.14■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Pknox2Q8BG99 474 aa23.14■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Fam208aQ69ZR9 1610 aaKnown RBP23.14■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Pank3Q8R2W9 370 aa23.13■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Rad21Q61550 635 aaKnown RBP23.12■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 PrxO55103 1391 aa23.12■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Neo1P97798 1493 aa23.11■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 NeflP08551 543 aa23.11■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 TnikP83510 1323 aa23.11■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Dnmt1P13864 1620 aaKnown RBP23.1■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 4933416C03RikQ3V063 378 aa23.1■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Zmym4A2A791 1549 aaKnown RBP23.1■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Inpp5dQ9ES52 1191 aa23.09■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Ifit1bl1D3Z6F0 470 aa23.08■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 Trappc8E9PWG2 1437 aa23.08■■□□□ 1.29
Col4a3bp-201ENSMUST00000077672 DaxxO35613 739 aa23.07■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Sart1Q9Z315 806 aaKnown RBP23.06■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Lrriq1Q0P5X1 1673 aa23.06■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Ppip5k1A2ARP1 1436 aa23.05■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 ChgaP26339 463 aaKnown RBP23.05■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Mast1Q9R1L5 1570 aa23.05■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Gm32742A0A1B0GT42 1604 aa23.04■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Adamts13Q769J6 1426 aa23.04■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Zscan10Q3URR7 782 aa23.04■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Plch2A2AP18 1501 aa23.03■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Arhgap5P97393 1501 aa23.03■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Rrbp1Q99PL5 1605 aaKnown RBP23.03■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Tex14Q7M6U3 1450 aa23.03■■□□□ 1.28
Col4a3bp-201ENSMUST00000077672 Arid4bA2CG63 1314 aaKnown RBP23■■□□□ 1.27
Col4a3bp-201ENSMUST00000077672 Esx1O88933 382 aa23■■□□□ 1.27
Col4a3bp-201ENSMUST00000077672 Neurl4Q5NCX5 1563 aa22.98■■□□□ 1.27
Col4a3bp-201ENSMUST00000077672 Ttll13A4Q9F6 804 aa22.98■■□□□ 1.27
Col4a3bp-201ENSMUST00000077672 Rusc2Q80U22 1514 aa22.98■■□□□ 1.27
Col4a3bp-201ENSMUST00000077672 Ttc41Q692V3 1318 aa22.97■■□□□ 1.27
Col4a3bp-201ENSMUST00000077672 Tmf1B9EKI3 1091 aa22.97■■□□□ 1.27
Col4a3bp-201ENSMUST00000077672 Kif16bB1AVY7 1312 aa22.95■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Sbno1Q689Z5 1390 aa22.94■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Rnf17Q99MV7 1640 aa22.94■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Mroh3A0A1D5RM54 893 aa22.94■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Mbd3Q9Z2D8 285 aaKnown RBP22.94■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Spag9Q58A65 1321 aaKnown RBP22.93■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Edc4Q3UJB9 1406 aaKnown RBP22.93■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 AknaQ80VW7 1404 aa22.93■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Nkx1-2P42580 305 aa22.93■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Ak9G3UYQ4 1894 aa22.93■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Pde4cQ3UEI1 686 aa22.93■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Ppp2r1aQ76MZ3 589 aa22.93■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 CrbnQ8C7D2 445 aa22.92■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Robo2Q7TPD3 1470 aa22.91■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Cfap74Q3UY96 1578 aa22.9■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Slc4a1apE9PX68 744 aa22.9■■□□□ 1.26
Col4a3bp-201ENSMUST00000077672 Pdcd11Q6NS46 1862 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 118.5 ms