RNA–Protein interactions for RNA: ENSMUST00000036690.6

Ptchd3-201, Transcript of Patched domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd3, Length 3,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3-201ENSMUST00000036690 Ncoa1P70365 1447 aa16.13■□□□□ 0.17
Ptchd3-201ENSMUST00000036690 Slc4a3P16283 1227 aa16.13■□□□□ 0.17
Ptchd3-201ENSMUST00000036690 Ssh2Q5SW75 1423 aa16.1■□□□□ 0.17
Ptchd3-201ENSMUST00000036690 Kif14L0N7N1 1674 aaKnown RBP16.1■□□□□ 0.17
Ptchd3-201ENSMUST00000036690 Spag9Q58A65 1321 aaKnown RBP16.09■□□□□ 0.17
Ptchd3-201ENSMUST00000036690 Atp10dQ8K2X1 1416 aa16.09■□□□□ 0.17
Ptchd3-201ENSMUST00000036690 Wdr7Q920I9 1489 aa16.09■□□□□ 0.17
Ptchd3-201ENSMUST00000036690 Znf608Q56A10 1511 aa16.08■□□□□ 0.17
Ptchd3-201ENSMUST00000036690 Egfem1Q8C088 590 aa16.08■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Ifit1bl1D3Z6F0 470 aa16.07■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 PnisrA2AJT4 805 aaKnown RBP16.06■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Os9Q8K2C7 672 aa16.06■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Cd109Q8R422 1442 aa16.06■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Kdm2aP59997 1161 aa16.05■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Cwc22Q8C5N3 908 aaKnown RBP16.05■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Fam208aQ69ZR9 1610 aaKnown RBP16.05■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Mroh3A0A1D5RM54 893 aa16.05■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Lamc1P02468 1607 aaKnown RBP16.04■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Ofd1Q80Z25 1017 aa16.04■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Pde4cQ3UEI1 686 aa16.04■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Ythdc2B2RR83 1445 aaKnown RBP16.04■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Kif3bQ61771 747 aa16.03■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Fmn2Q9JL04 1578 aa16.03■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Ccdc27Q3V036 639 aa16.02■□□□□ 0.16
Ptchd3-201ENSMUST00000036690 Chd1P40201 1711 aa16.02■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Mug2P28666 1451 aa16.02■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Cdk13Q69ZA1 1511 aaKnown RBP16.01■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Myom3A2ABU4 1439 aa16■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Lrrc9Q8CDN9 1456 aa16■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Kcnh8P59111 1102 aa15.99■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Stk24Q99KH8 431 aa15.98■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Atp7aQ64430 1491 aa15.98■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Upf2A2AT37 1269 aaKnown RBP15.98■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Lemd3Q9WU40 921 aa15.97■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Trpm2Q91YD4 1506 aa15.97■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Kif21bQ9QXL1 1668 aa15.97■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Asxl1P59598 1514 aa15.96■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Adgrl2Q8JZZ7 1487 aa15.96■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Ipo9Q91YE6 1041 aa15.96■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 Gm32742A0A1B0GT42 1604 aa15.96■□□□□ 0.15
Ptchd3-201ENSMUST00000036690 L3mbtl2P59178 703 aa15.95■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Tcerg1Q8CGF7 1100 aaKnown RBP15.95■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Sall3Q62255 1320 aa15.95■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Prdm16A2A935 1275 aa15.95■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Rnf17Q99MV7 1640 aa15.94■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 NhsB1AV60 1647 aa15.94■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 AI481877A2ALV5 1481 aa15.94■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Prdm10Q3UTQ7 1184 aa15.94■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 PtprgQ05909 1442 aa15.94■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Pabpn1Q8CCS6 302 aaKnown RBP15.93■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Hdac5Q9Z2V6 1113 aa15.93■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Igf1rQ60751 1373 aa15.92■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 PtprtQ99M80 1454 aa15.91■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Dot1lQ6XZL8 1540 aa15.9■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Cdc42bpbQ7TT50 1713 aa15.9■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Cfap74Q3UY96 1578 aa15.9■□□□□ 0.14
Ptchd3-201ENSMUST00000036690 Amer1Q7TS75 1132 aa15.89■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Mbd5B1AYB6 1498 aa15.89■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Plekhg5Q66T02 1073 aa15.89■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Gapvd1Q6PAR5 1458 aa15.88■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Naip6Q9JIB6 1403 aa15.87■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Polr3aB2RXC6 1390 aa15.87■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Tarbp1E9Q368 1579 aa15.87■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Abca8bQ8K440 1620 aa15.86■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Rock2P70336 1388 aa15.86■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Gm20521D3Z5F7 333 aa15.85■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 RalgapbQ8BQZ4 1484 aa15.85■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Anp32bQ9EST5 272 aaKnown RBP15.84■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Rock1P70335 1354 aa15.84■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Pank3Q8R2W9 370 aa15.84■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Abcc3B2RX12 1523 aa15.83■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 DroshaQ5HZJ0 1373 aaKnown RBP15.83■□□□□ 0.13
Ptchd3-201ENSMUST00000036690 Hsp90aa1P07901 733 aaKnown RBP15.83■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Inpp5dQ9ES52 1191 aa15.83■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Pdcd11Q6NS46 1862 aaKnown RBP15.82■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Usp54Q8BL06 1588 aaKnown RBP15.82■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Rad21Q61550 635 aaKnown RBP15.81■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Nsd2Q8BVE8 1365 aa15.81■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Fan1Q69ZT1 1020 aa15.81■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Srcin1Q9QWI6 1250 aa15.81■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Cpsf1Q9EPU4 1441 aaKnown RBP15.81■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Mast1Q9R1L5 1570 aa15.81■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Kidins220E9Q9B7 1793 aa15.8■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Rpgrip1lQ8CG73 1264 aa15.8■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 NeflP08551 543 aa15.8■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Srpk2O54781 681 aaKnown RBP15.79■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 ChgaP26339 463 aaKnown RBP15.79■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Erbb3Q61526 1339 aa15.79■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Slc4a1apE9PX68 744 aa15.79■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Edc4Q3UJB9 1406 aaKnown RBP15.78■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Kif1bQ60575 1816 aaKnown RBP15.78■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Q7TT23 1179 aa15.78■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Ccdc9Q8VC31 543 aaKnown RBP15.78■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Kiaa1210E9Q0C6 1637 aa15.77■□□□□ 0.12
Ptchd3-201ENSMUST00000036690 Ttc21bQ0HA38 1315 aa15.77■□□□□ 0.11
Ptchd3-201ENSMUST00000036690 Cnga1P29974 684 aa15.76■□□□□ 0.11
Ptchd3-201ENSMUST00000036690 Gm156Q58A37 223 aa15.76■□□□□ 0.11
Ptchd3-201ENSMUST00000036690 Iqcf3Q9D498 203 aa15.76■□□□□ 0.11
Ptchd3-201ENSMUST00000036690 Atp1b4Q99ME6 356 aa15.76■□□□□ 0.11
Ptchd3-201ENSMUST00000036690 Kank1E9Q238 1360 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms