RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Slc12a5Q91V14 1138 aa12.74□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Gpatch8A2A6A1 1505 aa12.73□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Mroh2bQ7M6Y6 1581 aa12.73□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Arhgap35Q91YM2 1499 aa12.72□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Hyal3Q8VEI3 412 aa12.72□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 JmyQ9QXM1 983 aa12.72□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Eif4g1Q6NZJ6 1600 aaKnown RBP12.71□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Saxo1B1AXP3 476 aa12.71□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 AqrQ8CFQ3 1481 aaKnown RBP12.71□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Kctd12Q6WVG3 327 aa12.69□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Ffar3Q3UFD7 319 aa12.68□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 LipiF6YQT7 476 aa12.67□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Map4k4P97820 1233 aaKnown RBP12.67□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Rem2Q8VEL9 341 aa12.67□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Ms4a4cQ9D3F6 226 aa12.67□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Cep162Q6ZQ06 1403 aa12.66□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Masp1P98064 704 aa12.66□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 PxdnQ3UQ28 1475 aa12.65□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 A930017K11RikE0CXQ2 571 aa12.65□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Fbxo31Q3TQF0 507 aa12.65□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Pdia6Q922R8 440 aaKnown RBP12.65□□□□□ -0.38
Ssbp1-201ENSMUST00000031971 Abcc2Q8VI47 1543 aa12.64□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Zeb1Q64318 1117 aa12.64□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 EprsQ8CGC7 1512 aaKnown RBP12.63□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Skap1Q3UUV5 355 aa12.63□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Map3k1P53349 1493 aa12.62□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Dnajc5P60904 198 aa12.62□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Abca16E9PWJ7 1678 aa12.61□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 WizO88286 1684 aaKnown RBP12.61□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Carmil1Q6EDY6 1374 aa12.61□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Pabpn1Q8CCS6 302 aaKnown RBP12.61□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Fgd6Q69ZL1 1399 aa12.6□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Prrt3Q6PE13 971 aa12.6□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Col17a1Q07563 1470 aa12.59□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Adamts12Q811B3 1600 aa12.59□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Mllt6B1AR10 1109 aa12.59□□□□□ -0.39
Ssbp1-201ENSMUST00000031971 Lrfn2Q80TG9 788 aa12.58□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 Cux1P53564 1515 aa12.57□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 Ufsp1Q9CZP0 217 aa12.57□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 CadpsQ80TJ1 1355 aa12.56□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 TchhA0A0B4J1F9 1599 aa12.56□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 Dnmt1P13864 1620 aaKnown RBP12.56□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 Dnajc5gQ8C632 165 aa12.56□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 BC005561E9Q5E2 1589 aa12.56□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 Map3k4O08648 1597 aa12.54□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 Ddx11Q6AXC6 880 aa12.53□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 Itgbl1Q8VDV0 494 aa12.53□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 AknaQ80VW7 1404 aa12.53□□□□□ -0.4
Ssbp1-201ENSMUST00000031971 Arhgap27A2AB59 869 aa12.52□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Gm13695A2AK44 830 aa12.52□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 CatipB9EKE5 520 aa12.52□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Itga6Q61739 1091 aa12.52□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 OscarQ8VBT3 265 aa12.52□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Clip1Q922J3 1391 aa12.52□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Gm7298A0A0N4SVU1 1476 aa12.52□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Nfxl1E9Q8I7 918 aaKnown RBP12.51□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 P3h3Q8CG70 732 aa12.51□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Rpap1Q80TE0 1409 aa12.51□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Neo1P97798 1493 aa12.51□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Abcc1O35379 1528 aa12.51□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Abca5Q8K448 1642 aa12.49□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Slx4Q6P1D7 1565 aa12.49□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Plekhg3Q4VAC9 1341 aa12.49□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Fbxo11Q7TPD1 930 aaKnown RBP12.49□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Soga1E1U8D0 1418 aa12.48□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Ankrd26Q811D2 1581 aa12.47□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Gapvd1Q6PAR5 1458 aa12.47□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Zcchc11B2RX14 1644 aaKnown RBP12.47□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 PtprtQ99M80 1454 aa12.46□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Tmc3Q7TQ69 1130 aa12.46□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Fam221bQ8C627 487 aa12.46□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Krtap3-2Q9D638 99 aa12.46□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Krtap3-3Q9D7P0 99 aa12.46□□□□□ -0.41
Ssbp1-201ENSMUST00000031971 Cep170Q6A065 1588 aa12.46□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Chd1P40201 1711 aa12.45□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Farp1F8VPU2 1048 aa12.45□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Nudt12Q9DCN1 462 aa12.45□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 AaasP58742 546 aa12.44□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Cacna1iE9Q7P2 2199 aa12.43□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Ythdc2B2RR83 1445 aaKnown RBP12.43□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Polr1aO35134 1717 aaKnown RBP12.42□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Mre11Q61216 706 aa12.42□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Gpr37l1Q99JG2 481 aa12.42□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 WrnO09053 1401 aa12.41□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Fyco1Q8VDC1 1437 aa12.41□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Adgrl3Q80TS3 1537 aa12.41□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Gm14025A2AP89 1413 aa12.4□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Gm156Q58A37 223 aa12.4□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 MetrnQ8C1Q4 291 aa12.4□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Unc5aQ8K1S4 898 aa12.4□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Arhgef12Q8R4H2 1543 aaKnown RBP12.4□□□□□ -0.42
Ssbp1-201ENSMUST00000031971 Ints3Q7TPD0 1041 aaKnown RBP12.38□□□□□ -0.43
Ssbp1-201ENSMUST00000031971 Ttll13A4Q9F6 804 aa12.36□□□□□ -0.43
Ssbp1-201ENSMUST00000031971 Krtap4-2B1AQ85 167 aa12.35□□□□□ -0.43
Ssbp1-201ENSMUST00000031971 Erich3F6QRE9 1637 aa12.35□□□□□ -0.43
Ssbp1-201ENSMUST00000031971 Lmo7E9PYF4 1699 aaKnown RBP12.35□□□□□ -0.43
Ssbp1-201ENSMUST00000031971 Arap1Q4LDD4 1452 aa12.34□□□□□ -0.43
Ssbp1-201ENSMUST00000031971 Spata31d1aE9QA35 1336 aa12.34□□□□□ -0.43
Ssbp1-201ENSMUST00000031971 Pprc1Q6NZN1 1644 aa12.33□□□□□ -0.43
Ssbp1-201ENSMUST00000031971 Setd5Q5XJV7 1441 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms