RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Dot1lQ6XZL8 1540 aa27.99■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Mug2P28666 1451 aa27.99■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Smg6P61406 1418 aaKnown RBP27.98■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 AI481877A2ALV5 1481 aa27.98■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Dapk1Q80YE7 1442 aa27.97■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Prdm16A2A935 1275 aa27.96■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Gapvd1Q6PAR5 1458 aa27.96■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Cd109Q8R422 1442 aa27.96■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 SafbD3YXK2 937 aaKnown RBP27.96■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Map3k5O35099 1380 aa27.96■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Spag9Q58A65 1321 aaKnown RBP27.95■■■□□ 2.07
Ctdsp1-201ENSMUST00000027367 Tnnt3Q9QZ47 272 aa27.93■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Amer1Q7TS75 1132 aa27.92■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Myom3A2ABU4 1439 aa27.91■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Atp7aQ64430 1491 aa27.9■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Hnrnpul2Q00PI9 745 aaKnown RBP27.9■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Grwd1Q810D6 446 aaKnown RBP27.9■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Rundc1Q0VDN7 615 aa27.9■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Cdk13Q69ZA1 1511 aaKnown RBP27.89■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Zfyve16Q80U44 1528 aa27.89■■■□□ 2.06
Ctdsp1-201ENSMUST00000027367 Arid3cA6PWV5 409 aa27.88■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Rock1P70335 1354 aa27.88■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Iqgap1Q9JKF1 1657 aaKnown RBP27.85■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Pde4cQ3UEI1 686 aa27.84■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Card11Q8CIS0 1159 aa27.84■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Usp54Q8BL06 1588 aaKnown RBP27.83■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Abca9Q8K449 1623 aa27.83■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Abca17E9PX95 1733 aa27.83■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Cpsf1Q9EPU4 1441 aaKnown RBP27.83■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Naip6Q9JIB6 1403 aa27.83■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Cwc22Q8C5N3 908 aaKnown RBP27.83■■■□□ 2.05
Ctdsp1-201ENSMUST00000027367 Stra8P70278 393 aa27.82■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Washc2Q6PGL7 1334 aa27.82■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Xrn1P97789 1719 aaKnown RBP27.82■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Robo2Q7TPD3 1470 aa27.82■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Tarbp1E9Q368 1579 aa27.82■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Kif1bQ60575 1816 aaKnown RBP27.81■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 ShprhQ7TPQ3 1674 aa27.81■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Pabpn1Q8CCS6 302 aaKnown RBP27.8■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 RalgapbQ8BQZ4 1484 aa27.8■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Polr3aB2RXC6 1390 aa27.79■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Cep170Q6A065 1588 aa27.78■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Rtl5Q5DTT4 599 aa27.77■■■□□ 2.04
Ctdsp1-201ENSMUST00000027367 Ppip5k1A2ARP1 1436 aa27.73■■■□□ 2.03
Ctdsp1-201ENSMUST00000027367 Lemd3Q9WU40 921 aa27.71■■■□□ 2.03
Ctdsp1-201ENSMUST00000027367 Plekhg5Q66T02 1073 aa27.71■■■□□ 2.03
Ctdsp1-201ENSMUST00000027367 Anp32aO35381 247 aa27.7■■■□□ 2.02
Ctdsp1-201ENSMUST00000027367 Znf710Q3U288 666 aa27.7■■■□□ 2.02
Ctdsp1-201ENSMUST00000027367 Nos1Q9Z0J4 1429 aa27.68■■■□□ 2.02
Ctdsp1-201ENSMUST00000027367 Nsd2Q8BVE8 1365 aa27.68■■■□□ 2.02
Ctdsp1-201ENSMUST00000027367 Edc4Q3UJB9 1406 aaKnown RBP27.68■■■□□ 2.02
Ctdsp1-201ENSMUST00000027367 Gm13695A2AK44 830 aa27.67■■■□□ 2.02
Ctdsp1-201ENSMUST00000027367 Myo5cE9Q1F5 1742 aa27.67■■■□□ 2.02
Ctdsp1-201ENSMUST00000027367 Kif3bQ61771 747 aa27.65■■■□□ 2.02
Ctdsp1-201ENSMUST00000027367 Adamts13Q769J6 1426 aa27.62■■■□□ 2.01
Ctdsp1-201ENSMUST00000027367 Slc24a1Q91WD8 1130 aa27.62■■■□□ 2.01
Ctdsp1-201ENSMUST00000027367 Ifit1bl1D3Z6F0 470 aa27.61■■■□□ 2.01
Ctdsp1-201ENSMUST00000027367 Mrs2Q5NCE8 434 aa27.6■■■□□ 2.01
Ctdsp1-201ENSMUST00000027367 Rock2P70336 1388 aa27.59■■■□□ 2.01
Ctdsp1-201ENSMUST00000027367 Wwc2Q6NXJ0 1187 aa27.59■■■□□ 2.01
Ctdsp1-201ENSMUST00000027367 Znf518aB2RRF6 1478 aaKnown RBP27.58■■■□□ 2.01
Ctdsp1-201ENSMUST00000027367 Erich6D3Z6S9 713 aa27.58■■■□□ 2.01
Ctdsp1-201ENSMUST00000027367 Ylpm1Q9R0I7 1386 aaKnown RBP27.57■■■□□ 2
Ctdsp1-201ENSMUST00000027367 Mroh3A0A1D5RM54 893 aa27.57■■■□□ 2
Ctdsp1-201ENSMUST00000027367 Exoc6Q8R313 802 aa27.57■■■□□ 2
Ctdsp1-201ENSMUST00000027367 Hdac5Q9Z2V6 1113 aa27.56■■■□□ 2
Ctdsp1-201ENSMUST00000027367 Gm156Q58A37 223 aa27.55■■■□□ 2
Ctdsp1-201ENSMUST00000027367 Fndc1E9Q043 1732 aa27.55■■■□□ 2
Ctdsp1-201ENSMUST00000027367 OvosQ3UU35 1456 aa27.54■■■□□ 2
Ctdsp1-201ENSMUST00000027367 Ak9G3UYQ4 1894 aa27.54■■■□□ 2
Ctdsp1-201ENSMUST00000027367 Tulp4Q9JIL5 1547 aa27.53■■■□□ 2
Ctdsp1-201ENSMUST00000027367 Abca6Q8K441 1624 aa27.51■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Zbtb4Q5F293 982 aa27.5■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Slc4a2P13808 1237 aaKnown RBP27.5■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Setd1aE9PYH6 1716 aa27.49■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Kdm5cP41230 1554 aa27.49■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Sall3Q62255 1320 aa27.48■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Abcc6Q9R1S7 1498 aa27.48■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 AnkarA2RT91 1465 aa27.47■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Tmem131lQ3U3D7 1597 aa27.47■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Ttc21bQ0HA38 1315 aa27.47■■□□□ 1.99
Ctdsp1-201ENSMUST00000027367 Topbp1Q6ZQF0 1515 aa27.44■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 PnisrA2AJT4 805 aaKnown RBP27.44■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Uggt2E9Q4X2 1504 aa27.44■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Atp10aO54827 1508 aa27.43■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 NrdcQ8BHG1 1161 aa27.42■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Ptch1Q61115 1434 aa27.42■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Prex1Q69ZK0 1650 aa27.42■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Plch2A2AP18 1501 aa27.42■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Iqgap3F8VQ29 1632 aa27.4■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Col17a1Q07563 1470 aa27.4■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 AglF8VPN4 1532 aa27.39■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Gli2Q0VGT2 1544 aa27.39■■□□□ 1.98
Ctdsp1-201ENSMUST00000027367 Tubgcp6G5E8P0 1769 aa27.37■■□□□ 1.97
Ctdsp1-201ENSMUST00000027367 ErbinQ80TH2 1402 aa27.36■■□□□ 1.97
Ctdsp1-201ENSMUST00000027367 Kdm2aP59997 1161 aa27.36■■□□□ 1.97
Ctdsp1-201ENSMUST00000027367 Stk24Q99KH8 431 aa27.35■■□□□ 1.97
Ctdsp1-201ENSMUST00000027367 Adgrl3Q80TS3 1537 aa27.34■■□□□ 1.97
Ctdsp1-201ENSMUST00000027367 Clasp1Q80TV8 1535 aaKnown RBP27.33■■□□□ 1.97
Ctdsp1-201ENSMUST00000027367 Cdc42bpgQ80UW5 1551 aa27.33■■□□□ 1.97
Retrieved 100 of 22,080 RNA–protein pairs in 7.1 ms