RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Irx3P81067 507 aa25,64■■□□□ 1,7
Tram1-201ENSMUST00000027068 Arhgap31A6X8Z5 1425 aa25,64■■□□□ 1,7
Tram1-201ENSMUST00000027068 RalgapbQ8BQZ4 1484 aa25,64■■□□□ 1,7
Tram1-201ENSMUST00000027068 Anp32bQ9EST5 272 aaKnown RBP25,64■■□□□ 1,7
Tram1-201ENSMUST00000027068 Setd1bQ8CFT2 1985 aa25,61■■□□□ 1,69
Tram1-201ENSMUST00000027068 Hsp90aa1P07901 733 aaKnown RBP25,6■■□□□ 1,69
Tram1-201ENSMUST00000027068 Iqcf3Q9D498 203 aa25,6■■□□□ 1,69
Tram1-201ENSMUST00000027068 Kiaa1551Q5DTW7 1521 aa25,59■■□□□ 1,69
Tram1-201ENSMUST00000027068 Rock2P70336 1388 aa25,59■■□□□ 1,69
Tram1-201ENSMUST00000027068 B4galnt3Q6L8S8 986 aa25,58■■□□□ 1,69
Tram1-201ENSMUST00000027068 Prkrip1Q9CWV6 186 aaKnown RBP25,58■■□□□ 1,69
Tram1-201ENSMUST00000027068 Mrc2Q64449 1479 aa25,57■■□□□ 1,68
Tram1-201ENSMUST00000027068 Shroom2A2ALU4 1481 aa25,56■■□□□ 1,68
Tram1-201ENSMUST00000027068 Pank3Q8R2W9 370 aa25,54■■□□□ 1,68
Tram1-201ENSMUST00000027068 Ttll13A4Q9F6 804 aa25,54■■□□□ 1,68
Tram1-201ENSMUST00000027068 Inpp5dQ9ES52 1191 aa25,53■■□□□ 1,68
Tram1-201ENSMUST00000027068 Prex2Q3LAC4 1598 aa25,53■■□□□ 1,68
Tram1-201ENSMUST00000027068 Polr3aB2RXC6 1390 aa25,53■■□□□ 1,68
Tram1-201ENSMUST00000027068 Magi1Q6RHR9 1471 aa25,52■■□□□ 1,68
Tram1-201ENSMUST00000027068 Dbr1Q923B1 550 aa25,51■■□□□ 1,67
Tram1-201ENSMUST00000027068 Cpsf1Q9EPU4 1441 aaKnown RBP25,51■■□□□ 1,67
Tram1-201ENSMUST00000027068 Esx1O88933 382 aa25,51■■□□□ 1,67
Tram1-201ENSMUST00000027068 Trpm2Q91YD4 1506 aa25,5■■□□□ 1,67
Tram1-201ENSMUST00000027068 Rrp7aQ9D1C9 280 aaKnown RBP25,5■■□□□ 1,67
Tram1-201ENSMUST00000027068 DaxxO35613 739 aa25,49■■□□□ 1,67
Tram1-201ENSMUST00000027068 Asxl1P59598 1514 aa25,48■■□□□ 1,67
Tram1-201ENSMUST00000027068 Ccdc141E9Q8Q6 1531 aa25,47■■□□□ 1,67
Tram1-201ENSMUST00000027068 Mink1Q9JM52 1308 aa25,47■■□□□ 1,67
Tram1-201ENSMUST00000027068 CrbnQ8C7D2 445 aa25,47■■□□□ 1,67
Tram1-201ENSMUST00000027068 Fam163aQ8CAA5 168 aa25,47■■□□□ 1,67
Tram1-201ENSMUST00000027068 Ifit1bl1D3Z6F0 470 aa25,47■■□□□ 1,67
Tram1-201ENSMUST00000027068 Abcc2Q8VI47 1543 aa25,46■■□□□ 1,67
Tram1-201ENSMUST00000027068 Dot1lQ6XZL8 1540 aa25,45■■□□□ 1,66
Tram1-201ENSMUST00000027068 DroshaQ5HZJ0 1373 aaKnown RBP25,44■■□□□ 1,66
Tram1-201ENSMUST00000027068 4933416C03RikQ3V063 378 aa25,44■■□□□ 1,66
Tram1-201ENSMUST00000027068 Apbb1Q9QXJ1 710 aa25,44■■□□□ 1,66
Tram1-201ENSMUST00000027068 PrxO55103 1391 aa25,44■■□□□ 1,66
Tram1-201ENSMUST00000027068 Ak9G3UYQ4 1894 aa25,43■■□□□ 1,66
Tram1-201ENSMUST00000027068 Nup160Q9Z0W3 1402 aaKnown RBP25,43■■□□□ 1,66
Tram1-201ENSMUST00000027068 CanxP35564 591 aaKnown RBP25,42■■□□□ 1,66
Tram1-201ENSMUST00000027068 Mapkbp1Q6NS57 1503 aa25,42■■□□□ 1,66
Tram1-201ENSMUST00000027068 Mroh2aD3Z750 1679 aa25,42■■□□□ 1,66
Tram1-201ENSMUST00000027068 Zmym4A2A791 1549 aaKnown RBP25,39■■□□□ 1,66
Tram1-201ENSMUST00000027068 Mlh3A0A1Y7VMP7 1443 aa25,38■■□□□ 1,65
Tram1-201ENSMUST00000027068 Iqgap1Q9JKF1 1657 aaKnown RBP25,38■■□□□ 1,65
Tram1-201ENSMUST00000027068 Kdm5cP41230 1554 aa25,37■■□□□ 1,65
Tram1-201ENSMUST00000027068 Zscan10Q3URR7 782 aa25,37■■□□□ 1,65
Tram1-201ENSMUST00000027068 Rock1P70335 1354 aa25,36■■□□□ 1,65
Tram1-201ENSMUST00000027068 Kif16bB1AVY7 1312 aa25,35■■□□□ 1,65
Tram1-201ENSMUST00000027068 Ssh2Q5SW75 1423 aa25,34■■□□□ 1,65
Tram1-201ENSMUST00000027068 Ccdc9Q8VC31 543 aaKnown RBP25,34■■□□□ 1,65
Tram1-201ENSMUST00000027068 PtprgQ05909 1442 aa25,34■■□□□ 1,65
Tram1-201ENSMUST00000027068 TnikP83510 1323 aa25,33■■□□□ 1,65
Tram1-201ENSMUST00000027068 Nkx1-2P42580 305 aa25,33■■□□□ 1,65
Tram1-201ENSMUST00000027068 Ipo4Q8VI75 1082 aa25,33■■□□□ 1,65
Tram1-201ENSMUST00000027068 Sart3Q9JLI8 962 aaKnown RBP25,33■■□□□ 1,65
Tram1-201ENSMUST00000027068 Cd109Q8R422 1442 aa25,33■■□□□ 1,65
Tram1-201ENSMUST00000027068 Atp7aQ64430 1491 aa25,32■■□□□ 1,64
Tram1-201ENSMUST00000027068 Tarbp1E9Q368 1579 aa25,32■■□□□ 1,64
Tram1-201ENSMUST00000027068 Clstn2Q9ER65 966 aa25,31■■□□□ 1,64
Tram1-201ENSMUST00000027068 Slc4a1apE9PX68 744 aa25,3■■□□□ 1,64
Tram1-201ENSMUST00000027068 Caskin1Q6P9K8 1431 aa25,3■■□□□ 1,64
Tram1-201ENSMUST00000027068 Tubgcp6G5E8P0 1769 aa25,29■■□□□ 1,64
Tram1-201ENSMUST00000027068 Gapvd1Q6PAR5 1458 aa25,29■■□□□ 1,64
Tram1-201ENSMUST00000027068 Tmf1B9EKI3 1091 aa25,28■■□□□ 1,64
Tram1-201ENSMUST00000027068 Neurod2Q62414 383 aa25,27■■□□□ 1,64
Tram1-201ENSMUST00000027068 Ppp2r1aQ76MZ3 589 aa25,27■■□□□ 1,64
Tram1-201ENSMUST00000027068 Rwdd1Q9CQK7 243 aa25,27■■□□□ 1,64
Tram1-201ENSMUST00000027068 Mroh3A0A1D5RM54 893 aa25,26■■□□□ 1,63
Tram1-201ENSMUST00000027068 Chmp5Q9D7S9 219 aa25,26■■□□□ 1,63
Tram1-201ENSMUST00000027068 Kdm2aP59997 1161 aa25,26■■□□□ 1,63
Tram1-201ENSMUST00000027068 Sart1Q9Z315 806 aaKnown RBP25,26■■□□□ 1,63
Tram1-201ENSMUST00000027068 Fmn2Q9JL04 1578 aa25,25■■□□□ 1,63
Tram1-201ENSMUST00000027068 Lrrc9Q8CDN9 1456 aa25,25■■□□□ 1,63
Tram1-201ENSMUST00000027068 Erich6D3Z6S9 713 aa25,25■■□□□ 1,63
Tram1-201ENSMUST00000027068 EspnQ9ET47 871 aa25,25■■□□□ 1,63
Tram1-201ENSMUST00000027068 Kdm2bQ6P1G2 1309 aa25,25■■□□□ 1,63
Tram1-201ENSMUST00000027068 Dnajc5bQ9CQ94 199 aa25,23■■□□□ 1,63
Tram1-201ENSMUST00000027068 Jph4Q80WT0 628 aa25,22■■□□□ 1,63
Tram1-201ENSMUST00000027068 Mbd3Q9Z2D8 285 aaKnown RBP25,22■■□□□ 1,63
Tram1-201ENSMUST00000027068 Plch2A2AP18 1501 aa25,22■■□□□ 1,63
Tram1-201ENSMUST00000027068 Trappc8E9PWG2 1437 aa25,21■■□□□ 1,63
Tram1-201ENSMUST00000027068 Speer4f1Q9D5Q6 258 aa25,21■■□□□ 1,63
Tram1-201ENSMUST00000027068 Eif4g3Q80XI3 1579 aaKnown RBP25,21■■□□□ 1,63
Tram1-201ENSMUST00000027068 Prdm10Q3UTQ7 1184 aa25,2■■□□□ 1,63
Tram1-201ENSMUST00000027068 Tex14Q7M6U3 1450 aa25,2■■□□□ 1,62
Tram1-201ENSMUST00000027068 NudcO35685 332 aaKnown RBP25,2■■□□□ 1,62
Tram1-201ENSMUST00000027068 Setd1aE9PYH6 1716 aa25,19■■□□□ 1,62
Tram1-201ENSMUST00000027068 Dnai1Q8C0M8 701 aa25,19■■□□□ 1,62
Tram1-201ENSMUST00000027068 Zcchc11B2RX14 1644 aaKnown RBP25,18■■□□□ 1,62
Tram1-201ENSMUST00000027068 Pbrm1Q8BSQ9 1634 aaKnown RBP25,17■■□□□ 1,62
Tram1-201ENSMUST00000027068 Adgrl2Q8JZZ7 1487 aa25,16■■□□□ 1,62
Tram1-201ENSMUST00000027068 Srcin1Q9QWI6 1250 aa25,16■■□□□ 1,62
Tram1-201ENSMUST00000027068 Neo1P97798 1493 aa25,15■■□□□ 1,62
Tram1-201ENSMUST00000027068 Dcaf11Q91VU6 549 aa25,15■■□□□ 1,62
Tram1-201ENSMUST00000027068 AknaQ80VW7 1404 aa25,14■■□□□ 1,61
Tram1-201ENSMUST00000027068 Fam184bQ0KK56 942 aa25,13■■□□□ 1,61
Tram1-201ENSMUST00000027068 4930567H17RikQ3V0K5 233 aa25,13■■□□□ 1,61
Tram1-201ENSMUST00000027068 Os9Q8K2C7 672 aa25,13■■□□□ 1,61
Tram1-201ENSMUST00000027068 Arhgap5P97393 1501 aa25,13■■□□□ 1,61
Retrieved 100 of 22,080 RNA–protein pairs in 10,7 ms