RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Ttll5Q8CHB8 1328 aa23.24■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Pla2r1Q62028 1487 aa23.23■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Zmym4A2A791 1549 aaKnown RBP23.23■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Trak1Q6PD31 939 aa23.23■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Dbr1Q923B1 550 aa23.23■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Wdr7Q920I9 1489 aa23.23■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Pdcl3Q8BVF2 240 aa23.21■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Chmp5Q9D7S9 219 aa23.21■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Supt6hQ62383 1726 aaKnown RBP23.21■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 DroshaQ5HZJ0 1373 aaKnown RBP23.2■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Ubl4bQ9CQ84 188 aa23.2■■□□□ 1.3
Sqstm1-201ENSMUST00000015981 Cpsf1Q9EPU4 1441 aaKnown RBP23.19■■□□□ 1.3
Sqstm1-201ENSMUST00000015981 Ttc41Q692V3 1318 aa23.18■■□□□ 1.3
Sqstm1-201ENSMUST00000015981 Mroh3A0A1D5RM54 893 aa23.18■■□□□ 1.3
Sqstm1-201ENSMUST00000015981 Ncoa3O09000 1398 aa23.18■■□□□ 1.3
Sqstm1-201ENSMUST00000015981 Soga1E1U8D0 1418 aa23.17■■□□□ 1.3
Sqstm1-201ENSMUST00000015981 Fam135aQ6NS59 1506 aa23.16■■□□□ 1.3
Sqstm1-201ENSMUST00000015981 Plb1Q3TTY0 1478 aa23.15■■□□□ 1.3
Sqstm1-201ENSMUST00000015981 Gapvd1Q6PAR5 1458 aa23.14■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Zmym3Q9JLM4 1370 aa23.13■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Asxl1P59598 1514 aa23.12■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Polr3aB2RXC6 1390 aa23.12■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Adcy10Q8C0T9 1614 aa23.12■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Rwdd1Q9CQK7 243 aa23.11■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Tubgcp6G5E8P0 1769 aa23.11■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Kif16bB1AVY7 1312 aa23.1■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Rock1P70335 1354 aa23.1■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Smc5Q8CG46 1101 aaKnown RBP23.09■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Eif2s2Q99L45 331 aaKnown RBP23.09■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 AU015836B2RUM3 263 aa23.08■■□□□ 1.29
Sqstm1-201ENSMUST00000015981 Kdm5cP41230 1554 aa23.08■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 WizO88286 1684 aaKnown RBP23.07■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Esx1O88933 382 aa23.07■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Gtf2a1Q99PM3 378 aa23.07■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Magi3Q9EQJ9 1476 aa23.07■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Arid4bA2CG63 1314 aaKnown RBP23.06■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Nup155Q99P88 1391 aaKnown RBP23.05■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Adamts12Q811B3 1600 aa23.05■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Mapk8ip3Q9ESN9 1337 aa23.05■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Ipo8Q7TMY7 1010 aa23.05■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 CrbnQ8C7D2 445 aa23.05■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Trpm2Q91YD4 1506 aa23.04■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Iqgap1Q9JKF1 1657 aaKnown RBP23.04■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Plekhh1Q80TI1 1356 aa23.03■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Setd1aE9PYH6 1716 aa23.03■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Plch2A2AP18 1501 aa23.03■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Trim30dE9PWL0 497 aa23.03■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Zbtb4Q5F293 982 aa23.03■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Pank3Q8R2W9 370 aa23.03■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Ak7Q9D2H2 614 aa23.02■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 WrnO09053 1401 aa23.02■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Tex14Q7M6U3 1450 aa23.02■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Rapgef6Q5NCJ1 1609 aa23.02■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 Hsp90ab1P11499 724 aaKnown RBP23.02■■□□□ 1.28
Sqstm1-201ENSMUST00000015981 PrxO55103 1391 aa23■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Ppp1r9bQ6R891 817 aaKnown RBP23■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Tmc1Q8R4P5 757 aa23■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Dnajc5bQ9CQ94 199 aa23■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Inpp5dQ9ES52 1191 aa22.99■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Htatsf1Q8BGC0 757 aa22.99■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Cdc42bpaQ3UU96 1719 aa22.99■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Grin2aP35436 1464 aa22.99■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Apbb1Q9QXJ1 710 aa22.98■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Clasp1Q80TV8 1535 aaKnown RBP22.98■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Dcaf11Q91VU6 549 aa22.97■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Tarbp1E9Q368 1579 aa22.97■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Dot1lQ6XZL8 1540 aa22.97■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Arhgap31A6X8Z5 1425 aa22.96■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 Map4P27546 1125 aaKnown RBP22.96■■□□□ 1.27
Sqstm1-201ENSMUST00000015981 PxdnQ3UQ28 1475 aa22.95■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Cc2d2bA0A286YDU8 1405 aa22.95■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Arhgef11Q68FM7 1552 aa22.95■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Zscan10Q3URR7 782 aa22.95■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Ccdc141E9Q8Q6 1531 aa22.94■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 4930567H17RikQ3V0K5 233 aa22.94■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Gm14025A2AP89 1413 aa22.94■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Kiaa1551Q5DTW7 1521 aa22.93■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Ccdc183A2AJB1 534 aa22.93■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Rrp9Q91WM3 475 aaKnown RBP22.92■■□□□ 1.26
Sqstm1-201ENSMUST00000015981 Dnttip2Q8R2M2 758 aaKnown RBP22.89■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Eif4g3Q80XI3 1579 aaKnown RBP22.88■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Gm6268A2A3U9 297 aa22.87■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Tmf1B9EKI3 1091 aa22.87■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Ppp2r1aQ76MZ3 589 aa22.87■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 4933402E13RikQ9D4D2 429 aa22.87■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Phf14Q9D4H9 881 aa22.87■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Zbtb7cQ8VCZ7 619 aa22.86■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Rrbp1Q99PL5 1605 aaKnown RBP22.86■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 ArxO35085 564 aa22.84■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Speer4f1Q9D5Q6 258 aa22.84■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 PtprgQ05909 1442 aa22.83■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Tspyl2Q7TQI8 677 aa22.83■■□□□ 1.25
Sqstm1-201ENSMUST00000015981 Tdrd9Q14BI7 1383 aa22.83■■□□□ 1.24
Sqstm1-201ENSMUST00000015981 Atf7ipQ7TT18 1306 aa22.82■■□□□ 1.24
Sqstm1-201ENSMUST00000015981 Kif20aP97329 887 aa22.82■■□□□ 1.24
Sqstm1-201ENSMUST00000015981 Rab3gap2Q8BMG7 1366 aa22.81■■□□□ 1.24
Sqstm1-201ENSMUST00000015981 Znf692Q3U381 531 aa22.81■■□□□ 1.24
Sqstm1-201ENSMUST00000015981 Ccdc30Q8BVF4 654 aa22.81■■□□□ 1.24
Sqstm1-201ENSMUST00000015981 Spryd3E9Q9B3 442 aa22.8■■□□□ 1.24
Sqstm1-201ENSMUST00000015981 Abca16E9PWJ7 1678 aa22.8■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms