RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 4930567H17RikQ3V0K5 233 aa13.53□□□□□ -0.24
Clip3-201ENSMUST00000014065 Il16O54824 1322 aa13.53□□□□□ -0.24
Clip3-201ENSMUST00000014065 Sart3Q9JLI8 962 aaKnown RBP13.53□□□□□ -0.24
Clip3-201ENSMUST00000014065 Pbrm1Q8BSQ9 1634 aaKnown RBP13.53□□□□□ -0.24
Clip3-201ENSMUST00000014065 Kdm6bQ5NCY0 1641 aa13.52□□□□□ -0.24
Clip3-201ENSMUST00000014065 Gcc2Q8CHG3 1679 aa13.52□□□□□ -0.24
Clip3-201ENSMUST00000014065 Soga1E1U8D0 1418 aa13.52□□□□□ -0.24
Clip3-201ENSMUST00000014065 Mroh3A0A1D5RM54 893 aa13.52□□□□□ -0.24
Clip3-201ENSMUST00000014065 Polr3glQ8R0C0 218 aa13.52□□□□□ -0.24
Clip3-201ENSMUST00000014065 Ccdc9Q8VC31 543 aaKnown RBP13.52□□□□□ -0.24
Clip3-201ENSMUST00000014065 Plb1Q3TTY0 1478 aa13.52□□□□□ -0.25
Clip3-201ENSMUST00000014065 Cdk13Q69ZA1 1511 aaKnown RBP13.52□□□□□ -0.25
Clip3-201ENSMUST00000014065 Plcd4Q8K3R3 807 aa13.52□□□□□ -0.25
Clip3-201ENSMUST00000014065 Kank1E9Q238 1360 aa13.51□□□□□ -0.25
Clip3-201ENSMUST00000014065 Rwdd1Q9CQK7 243 aa13.5□□□□□ -0.25
Clip3-201ENSMUST00000014065 SphkapQ6NSW3 1687 aa13.5□□□□□ -0.25
Clip3-201ENSMUST00000014065 Slc4a1apE9PX68 744 aa13.5□□□□□ -0.25
Clip3-201ENSMUST00000014065 Arhgap31A6X8Z5 1425 aa13.5□□□□□ -0.25
Clip3-201ENSMUST00000014065 Setbp1Q9Z180 1582 aa13.5□□□□□ -0.25
Clip3-201ENSMUST00000014065 Rock2P70336 1388 aa13.49□□□□□ -0.25
Clip3-201ENSMUST00000014065 Naip6Q9JIB6 1403 aa13.49□□□□□ -0.25
Clip3-201ENSMUST00000014065 Speer4f1Q9D5Q6 258 aa13.49□□□□□ -0.25
Clip3-201ENSMUST00000014065 AlkP97793 1621 aa13.48□□□□□ -0.25
Clip3-201ENSMUST00000014065 Wdr7Q920I9 1489 aa13.48□□□□□ -0.25
Clip3-201ENSMUST00000014065 Clstn2Q9ER65 966 aa13.48□□□□□ -0.25
Clip3-201ENSMUST00000014065 Dnai1Q8C0M8 701 aa13.48□□□□□ -0.25
Clip3-201ENSMUST00000014065 Armcx1Q9CX83 456 aa13.48□□□□□ -0.25
Clip3-201ENSMUST00000014065 Kif14L0N7N1 1674 aaKnown RBP13.48□□□□□ -0.25
Clip3-201ENSMUST00000014065 Abca16E9PWJ7 1678 aa13.47□□□□□ -0.25
Clip3-201ENSMUST00000014065 EspnQ9ET47 871 aa13.47□□□□□ -0.25
Clip3-201ENSMUST00000014065 Kdm3bQ6ZPY7 1562 aa13.47□□□□□ -0.25
Clip3-201ENSMUST00000014065 Zscan10Q3URR7 782 aa13.47□□□□□ -0.25
Clip3-201ENSMUST00000014065 Rangap1P46061 589 aaKnown RBP13.46□□□□□ -0.25
Clip3-201ENSMUST00000014065 Trim26Q99PN3 545 aa13.46□□□□□ -0.25
Clip3-201ENSMUST00000014065 Tmf1B9EKI3 1091 aa13.46□□□□□ -0.26
Clip3-201ENSMUST00000014065 Rock1P70335 1354 aa13.45□□□□□ -0.26
Clip3-201ENSMUST00000014065 Adcy10Q8C0T9 1614 aa13.45□□□□□ -0.26
Clip3-201ENSMUST00000014065 Hsp90ab1P11499 724 aaKnown RBP13.45□□□□□ -0.26
Clip3-201ENSMUST00000014065 Disp1Q3TDN0 1521 aa13.44□□□□□ -0.26
Clip3-201ENSMUST00000014065 PrxO55103 1391 aa13.44□□□□□ -0.26
Clip3-201ENSMUST00000014065 Kif16bB1AVY7 1312 aa13.44□□□□□ -0.26
Clip3-201ENSMUST00000014065 NudcO35685 332 aaKnown RBP13.43□□□□□ -0.26
Clip3-201ENSMUST00000014065 Spryd3E9Q9B3 442 aa13.42□□□□□ -0.26
Clip3-201ENSMUST00000014065 Eif2s2Q99L45 331 aaKnown RBP13.42□□□□□ -0.26
Clip3-201ENSMUST00000014065 Sart1Q9Z315 806 aaKnown RBP13.42□□□□□ -0.26
Clip3-201ENSMUST00000014065 Cnga1P29974 684 aa13.42□□□□□ -0.26
Clip3-201ENSMUST00000014065 Arhgef12Q8R4H2 1543 aaKnown RBP13.41□□□□□ -0.26
Clip3-201ENSMUST00000014065 Srcin1Q9QWI6 1250 aa13.41□□□□□ -0.26
Clip3-201ENSMUST00000014065 RalgapbQ8BQZ4 1484 aa13.41□□□□□ -0.26
Clip3-201ENSMUST00000014065 Rapgef6Q5NCJ1 1609 aa13.4□□□□□ -0.26
Clip3-201ENSMUST00000014065 Supt6hQ62383 1726 aaKnown RBP13.4□□□□□ -0.26
Clip3-201ENSMUST00000014065 Ppm1gQ61074 542 aa13.4□□□□□ -0.26
Clip3-201ENSMUST00000014065 Mbd3Q9Z2D8 285 aaKnown RBP13.39□□□□□ -0.27
Clip3-201ENSMUST00000014065 Ppp2r1aQ76MZ3 589 aa13.39□□□□□ -0.27
Clip3-201ENSMUST00000014065 Dcaf11Q91VU6 549 aa13.39□□□□□ -0.27
Clip3-201ENSMUST00000014065 Polr3aB2RXC6 1390 aa13.38□□□□□ -0.27
Clip3-201ENSMUST00000014065 Lrriq1Q0P5X1 1673 aa13.38□□□□□ -0.27
Clip3-201ENSMUST00000014065 Mbd5B1AYB6 1498 aa13.38□□□□□ -0.27
Clip3-201ENSMUST00000014065 Nkx1-2P42580 305 aa13.38□□□□□ -0.27
Clip3-201ENSMUST00000014065 Nup160Q9Z0W3 1402 aaKnown RBP13.37□□□□□ -0.27
Clip3-201ENSMUST00000014065 Gm20521D3Z5F7 333 aa13.37□□□□□ -0.27
Clip3-201ENSMUST00000014065 Magi1Q6RHR9 1471 aa13.37□□□□□ -0.27
Clip3-201ENSMUST00000014065 Ak7Q9D2H2 614 aa13.37□□□□□ -0.27
Clip3-201ENSMUST00000014065 Cd109Q8R422 1442 aa13.37□□□□□ -0.27
Clip3-201ENSMUST00000014065 Map3k4O08648 1597 aa13.36□□□□□ -0.27
Clip3-201ENSMUST00000014065 Fam163aQ8CAA5 168 aa13.36□□□□□ -0.27
Clip3-201ENSMUST00000014065 Asxl1P59598 1514 aa13.36□□□□□ -0.27
Clip3-201ENSMUST00000014065 Tspyl2Q7TQI8 677 aa13.36□□□□□ -0.27
Clip3-201ENSMUST00000014065 Gm6268A2A3U9 297 aa13.36□□□□□ -0.27
Clip3-201ENSMUST00000014065 Stk24Q99KH8 431 aa13.35□□□□□ -0.27
Clip3-201ENSMUST00000014065 Dnajc5bQ9CQ94 199 aa13.35□□□□□ -0.27
Clip3-201ENSMUST00000014065 Fam184bQ0KK56 942 aa13.35□□□□□ -0.27
Clip3-201ENSMUST00000014065 Ecm2Q5FW85 670 aa13.35□□□□□ -0.27
Clip3-201ENSMUST00000014065 Ccdc30Q8BVF4 654 aa13.35□□□□□ -0.27
Clip3-201ENSMUST00000014065 Prex2Q3LAC4 1598 aa13.34□□□□□ -0.27
Clip3-201ENSMUST00000014065 Pank1Q8K4K6 548 aa13.34□□□□□ -0.27
Clip3-201ENSMUST00000014065 Ipo8Q7TMY7 1010 aa13.33□□□□□ -0.28
Clip3-201ENSMUST00000014065 Golga2Q921M4 999 aa13.33□□□□□ -0.28
Clip3-201ENSMUST00000014065 Zmym4A2A791 1549 aaKnown RBP13.33□□□□□ -0.28
Clip3-201ENSMUST00000014065 Abcc2Q8VI47 1543 aa13.33□□□□□ -0.28
Clip3-201ENSMUST00000014065 AknaQ80VW7 1404 aa13.33□□□□□ -0.28
Clip3-201ENSMUST00000014065 Mre11Q61216 706 aa13.33□□□□□ -0.28
Clip3-201ENSMUST00000014065 Kif7B7ZNG0 1348 aa13.33□□□□□ -0.28
Clip3-201ENSMUST00000014065 Lamc1P02468 1607 aaKnown RBP13.33□□□□□ -0.28
Clip3-201ENSMUST00000014065 Cdc42bpaQ3UU96 1719 aa13.32□□□□□ -0.28
Clip3-201ENSMUST00000014065 Ak9G3UYQ4 1894 aa13.32□□□□□ -0.28
Clip3-201ENSMUST00000014065 Arhgef11Q68FM7 1552 aa13.32□□□□□ -0.28
Clip3-201ENSMUST00000014065 Jph4Q80WT0 628 aa13.32□□□□□ -0.28
Clip3-201ENSMUST00000014065 Shroom2A2ALU4 1481 aa13.31□□□□□ -0.28
Clip3-201ENSMUST00000014065 Arid4bA2CG63 1314 aaKnown RBP13.31□□□□□ -0.28
Clip3-201ENSMUST00000014065 Cpsf1Q9EPU4 1441 aaKnown RBP13.31□□□□□ -0.28
Clip3-201ENSMUST00000014065 Zcchc11B2RX14 1644 aaKnown RBP13.3□□□□□ -0.28
Clip3-201ENSMUST00000014065 Sall3Q62255 1320 aa13.3□□□□□ -0.28
Clip3-201ENSMUST00000014065 Plekhh1Q80TI1 1356 aa13.3□□□□□ -0.28
Clip3-201ENSMUST00000014065 Ccdc141E9Q8Q6 1531 aa13.3□□□□□ -0.28
Clip3-201ENSMUST00000014065 Spag9Q58A65 1321 aaKnown RBP13.29□□□□□ -0.28
Clip3-201ENSMUST00000014065 Fan1Q69ZT1 1020 aa13.29□□□□□ -0.28
Clip3-201ENSMUST00000014065 Atp7aQ64430 1491 aa13.29□□□□□ -0.28
Clip3-201ENSMUST00000014065 Pde4cQ3UEI1 686 aa13.29□□□□□ -0.28
Clip3-201ENSMUST00000014065 Srpk2O54781 681 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms