RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeast

Gene CCS1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCS1	YMR038C	ATG7	P38862	630 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	UTP9	P38882	575 aa	Known RBP	4.25	□□□□□ -1.73
CCS1	YMR038C	PSD1	P39006	500 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	GCD10	P41814	478 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	MEP2	P41948	499 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	ECO1	P43605	281 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	YNL140C	P53910	189 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	YML131W	Q03102	365 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	SWF1	Q04629	336 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	YLR053C	Q12026	108 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	VCX1	Q99385	411 aa		4.25	□□□□□ -1.73
CCS1	YMR038C	BPH1	P25356	2167 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	CDC8	P00572	216 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	COS2	P0CX12	379 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	COS3	P0CX13	379 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	DAP2	P18962	818 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	CNA1	P23287	553 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	ERG9	P29704	444 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	RPS1A	P33442	255 aa	Known RBP	4.24	□□□□□ -1.73
CCS1	YMR038C	YBR062C	P38239	180 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CCS1	YMR038C	FLO5	P38894	1075 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	VPS41	P38959	992 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	YHB1	P39676	399 aa	Known RBP	4.24	□□□□□ -1.73
CCS1	YMR038C	COS4	P43542	379 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	SWP82	P43554	623 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	URB2	P47108	1174 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	GLO1	P50107	326 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	MAL13	P53338	473 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	MAL12	P53341	584 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	DCP2	P53550	970 aa	Known RBP	4.24	□□□□□ -1.73
CCS1	YMR038C	RPL15B	P54780	204 aa	Predicted RBP	4.24	□□□□□ -1.73
CCS1	YMR038C	SKI8	Q02793	397 aa	Predicted RBP	4.24	□□□□□ -1.73
CCS1	YMR038C	CGI121	Q03705	181 aa	Known RBP	4.24	□□□□□ -1.73
CCS1	YMR038C	NMD4	Q12129	218 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	RRI1	Q12468	440 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	PAR32	Q12515	295 aa	Known RBP	4.24	□□□□□ -1.73
CCS1	YMR038C	YOR019W	Q99248	730 aa		4.24	□□□□□ -1.73
CCS1	YMR038C	YER145C-A	A0A023PYF4	145 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	SUI3	P09064	285 aa	Known RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	YSF3	P0C074	85 aa	Predicted RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	YFR010W-A	P0C5N0	62 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	GPI12	P23797	304 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	YME1	P32795	747 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	COX13	P32799	129 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	TEF4	P36008	412 aa	Known RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	VPS21	P36017	210 aa	Known RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	MNN2	P38069	597 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	DTR1	P38125	572 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	RIM2	P38127	377 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	FMP32	P43557	207 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	EMC2	P47133	292 aa	Known RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	YJR141W	P47172	347 aa	Predicted RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	CDH1	P53197	566 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	GTR2	P53290	341 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	LSC1	P53598	329 aa	Known RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	IST1	P53843	298 aa	Predicted RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	YMR111C	Q04461	462 aa	Predicted RBP	4.23	□□□□□ -1.73
CCS1	YMR038C	MCH4	Q08268	501 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	RSA1	Q08932	381 aa		4.23	□□□□□ -1.73
CCS1	YMR038C	STE7	P06784	515 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	PET111	P08468	800 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	RPL20A	P0CX23	172 aa	Known RBP	4.22	□□□□□ -1.73
CCS1	YMR038C	RPL20B	P0CX24	172 aa	Predicted RBP	4.22	□□□□□ -1.73
CCS1	YMR038C	NMT1	P14743	455 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	SLM5	P25345	492 aa	Known RBP	4.22	□□□□□ -1.73
CCS1	YMR038C	YCP4	P25349	247 aa	Known RBP	4.22	□□□□□ -1.73
CCS1	YMR038C	YIL169C	P40442	995 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	MET18	P40469	1032 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	YIL001W	P40560	513 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	FAR3	P46671	204 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	RPE1	P46969	238 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	ALB1	P47019	175 aa	Predicted RBP	4.22	□□□□□ -1.73
CCS1	YMR038C	MDV1	P47025	714 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	ATP22	P50273	684 aa	Predicted RBP	4.22	□□□□□ -1.73
CCS1	YMR038C	MPA43	P53583	542 aa	Predicted RBP	4.22	□□□□□ -1.73
CCS1	YMR038C	ESA1	Q08649	445 aa		4.22	□□□□□ -1.73
CCS1	YMR038C	RHO2	P06781	192 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	CHO1	P08456	276 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	MRP2	P10663	115 aa	Predicted RBP	4.21	□□□□□ -1.74
CCS1	YMR038C	SRV2	P17555	526 aa	Known RBP	4.21	□□□□□ -1.74
CCS1	YMR038C	AIM17	P23180	465 aa	Known RBP	4.21	□□□□□ -1.74
CCS1	YMR038C	OCA4	P25366	362 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	BUB2	P26448	306 aa	Predicted RBP	4.21	□□□□□ -1.74
CCS1	YMR038C	SLC1	P33333	303 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	SPO23	P33757	523 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	DOA1	P36037	715 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	FES1	P38260	290 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	AIM2	P39721	246 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	YER010C	P40011	234 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	PFK26	P40433	827 aa	Known RBP	4.21	□□□□□ -1.74
CCS1	YMR038C	PTR3	P43606	678 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	MNN5	P46982	586 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	AIM22	P47051	409 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	TPC1	P53257	314 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	YPL107W	Q02873	248 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	MIX14	Q04341	121 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	SEI1	Q06058	285 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	GAS2	Q06135	555 aa		4.21	□□□□□ -1.74
CCS1	YMR038C	SLF1	Q12034	447 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms