RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	PFA5	Q03289	374 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	TLG1	Q03322	224 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	EKI1	Q03764	534 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	YPS7	Q06325	596 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	MCP1	Q12106	302 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	SPC3	Q12133	184 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	RAD51	P25454	400 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	LYP1	P32487	611 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	TIM12	P32830	109 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	SLC1	P33333	303 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	SEF1	P34228	1148 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	JEN1	P36035	616 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	ECM4	P36156	370 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	MTC4	P38335	694 aa	Known RBP	11.57	□□□□□ -0.56
LSM3	YLR438C-A	APE4	P38821	490 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	EXG2	P52911	562 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	ATG21	Q02887	496 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	SNZ1	Q03148	297 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	YDR249C	Q03787	373 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	SEC13	Q04491	297 aa	Known RBP	11.57	□□□□□ -0.56
LSM3	YLR438C-A	RSA3	Q05942	220 aa	Known RBP	11.57	□□□□□ -0.56
LSM3	YLR438C-A	HNT3	Q08702	217 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	YPL119C-A	Q3E751	87 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	MED11	Q99278	115 aa		11.57	□□□□□ -0.56
LSM3	YLR438C-A	ERG8	P24521	451 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	HIS7	P33734	552 aa	Known RBP	11.56	□□□□□ -0.56
LSM3	YLR438C-A	KAE1	P36132	386 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	STS1	P38637	319 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	ARN2	P38724	620 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	SKN7	P38889	622 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	SEC24	P40482	926 aa	Known RBP	11.56	□□□□□ -0.56
LSM3	YLR438C-A	VPS73	P53142	486 aa	Known RBP	11.56	□□□□□ -0.56
LSM3	YLR438C-A	ASI1	P54074	624 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	BUR2	Q05949	395 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	SNT309	Q06091	175 aa	Predicted RBP	11.56	□□□□□ -0.56
LSM3	YLR438C-A	YLR345W	Q06137	509 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	YPR127W	Q06494	345 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	YPL191C	Q08930	360 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	MDM32	Q12171	622 aa		11.56	□□□□□ -0.56
LSM3	YLR438C-A	PST2	Q12335	198 aa	Known RBP	11.56	□□□□□ -0.56
LSM3	YLR438C-A	DPM1	P14020	267 aa	Known RBP	11.55	□□□□□ -0.56
LSM3	YLR438C-A	URE2	P23202	354 aa	Known RBP	11.55	□□□□□ -0.56
LSM3	YLR438C-A	CNA1	P23287	553 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	HSP30	P25619	332 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	OAC1	P32332	324 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	GPX1	P36014	167 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	YHR180W	P38868	163 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	ALP1	P38971	573 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	SOP4	P39543	234 aa	Predicted RBP	11.55	□□□□□ -0.56
LSM3	YLR438C-A	PKP1	P40530	394 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	HXT9	P40885	567 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	YGL235W	P53071	178 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	BUD9	P53226	547 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	YNR062C	P53748	327 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	PDR16	P53860	351 aa	Known RBP	11.55	□□□□□ -0.56
LSM3	YLR438C-A	HXT11	P54862	567 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	DML1	Q03652	475 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	SNO4	Q04902	237 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	AVO1	Q08236	1176 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	HSP33	Q08914	237 aa	Known RBP	11.55	□□□□□ -0.56
LSM3	YLR438C-A	HSP32	Q08992	237 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	LSO1	Q3E827	93 aa		11.55	□□□□□ -0.56
LSM3	YLR438C-A	MAE1	P36013	669 aa	Known RBP	11.54	□□□□□ -0.56
LSM3	YLR438C-A	TPO5	P36029	618 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	YKR073C	P36153	106 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	RRP4	P38792	359 aa	Known RBP	11.54	□□□□□ -0.56
LSM3	YLR438C-A	IPT1	P38954	527 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	YNL208W	P40159	199 aa	Known RBP	11.54	□□□□□ -0.56
LSM3	YLR438C-A	YFR054C	P43622	192 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	SAM37	P50110	327 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	HOL1	P53389	586 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	SUR7	P54003	302 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	YDR209C	Q03480	137 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	YPQ2	Q06328	317 aa		11.54	□□□□□ -0.56
LSM3	YLR438C-A	RRG7	Q08774	242 aa	Predicted RBP	11.54	□□□□□ -0.56
LSM3	YLR438C-A	YPK2	P18961	677 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	IDP1	P21954	428 aa	Known RBP	11.53	□□□□□ -0.56
LSM3	YLR438C-A	DHR2	P36009	735 aa	Predicted RBP	11.53	□□□□□ -0.56
LSM3	YLR438C-A	FET3	P38993	636 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	NAB3	P38996	802 aa	Known RBP RIP-Chip data	11.53	□□□□□ -0.56	not detected
LSM3	YLR438C-A	ZRG8	P40021	1076 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	RBG2	P53295	368 aa	Known RBP	11.53	□□□□□ -0.56
LSM3	YLR438C-A	GRX5	Q02784	150 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	SNX41	Q04053	625 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	NTG2	Q08214	380 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	RDR1	Q08904	546 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	SIA1	Q12212	622 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	TRM10	Q12400	293 aa		11.53	□□□□□ -0.56
LSM3	YLR438C-A	MET17	P06106	444 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	YHR214C-D	P0CX93	97 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	NUP1	P20676	1076 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	MRPS28	P21771	286 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	APD1	P38281	316 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	AVT6	P40074	448 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	ECO1	P43605	281 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	NQM1	P53228	333 aa	Predicted RBP	11.52	□□□□□ -0.57
LSM3	YLR438C-A	PLM2	Q04383	521 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	ARP10	Q04549	284 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	ELP6	Q04868	273 aa		11.52	□□□□□ -0.57
LSM3	YLR438C-A	UTP21	Q06078	939 aa	Predicted RBP	11.52	□□□□□ -0.57

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