RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	BDH1	P39714	382 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	BUR6	P40096	142 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	SDP1	P40479	209 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	SWP82	P43554	623 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	HIT1	P46973	164 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	RFX1	P48743	811 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YGL082W	P53155	381 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	GPI1	P53306	609 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YIP3	P53633	176 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	MTQ1	P53944	314 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	OCA2	P53949	197 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
AVT1	YJR001W	YDR541C	Q03049	344 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YMR279C	Q03263	540 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YDR249C	Q03787	373 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YMR160W	Q03823	816 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YMR027W	Q04371	470 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	CDC123	Q05791	360 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	RXT3	Q07458	294 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	NSE1	Q07913	336 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	GPM2	Q12008	311 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	YLR108C	Q12259	485 aa		4.17	□□□□□ -1.74
AVT1	YJR001W	COX2	P00410	251 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	CMD1	P06787	147 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	SNF3	P10870	884 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	ART10	P18634	518 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	YSP3	P25036	478 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	RFA2	P26754	273 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	GSY2	P27472	705 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
AVT1	YJR001W	PRX1	P34227	261 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	RPC25	P35718	212 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	DOA1	P36037	715 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	FMP23	P38231	175 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	SHE3	P38272	425 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	ALP1	P38971	573 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	RBG1	P39729	369 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	GDS1	P41913	522 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YGR017W	P53210	297 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	NQM1	P53228	333 aa	Predicted RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	IMP4	P53941	290 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	ALG11	P53954	548 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	SAE3	P89114	91 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YPL062W	Q02781	134 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	OST6	Q03723	332 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	CSN9	Q03981	162 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	OPT2	Q06593	877 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YLR036C	Q07986	203 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	ZEO1	Q08245	113 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YOR029W	Q12243	111 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YOP1	Q12402	180 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	COX3	P00420	269 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	PUT2	P07275	575 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	MRP2	P10663	115 aa	Predicted RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	URA6	P15700	204 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	ELO2	P25358	347 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	HCM1	P25364	564 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	PUP3	P25451	205 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	PTC6	P25646	442 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	DIA4	P38705	446 aa	Predicted RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	YHR210C	P38893	341 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	UBP5	P39944	805 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	AST2	P39945	430 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	YEL020C	P39994	560 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	UBX6	P47049	396 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	STE24	P47154	453 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	ORC5	P50874	479 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	SBH2	P52871	88 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	COX18	P53239	316 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	AAT1	Q01802	451 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	DYN2	Q02647	92 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	SHR3	Q02774	210 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YPL034W	Q03083	165 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	TY1A-DR2	Q03964	440 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	CSM3	Q04659	317 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	HOF1	Q05080	669 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	PAM18	Q07914	168 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YNG1	Q08465	219 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	BAG7	Q12128	409 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YPL150W	Q12152	901 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	OCA6	Q12454	224 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	ZPS1	Q12512	249 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	YBR255C-A	Q3E776	120 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	ECM3	Q99252	613 aa		4.16	□□□□□ -1.74
AVT1	YJR001W	UTP10	P42945	1769 aa	Known RBP	4.16	□□□□□ -1.74
AVT1	YJR001W	CDC28	P00546	298 aa	Known RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	HTB1	P02293	131 aa	Known RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	HTB2	P02294	131 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	CDC33	P07260	213 aa	Known RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	RPL31B	P0C2H9	113 aa	Known RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	YPK1	P12688	680 aa	Known RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	CLN3	P13365	580 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	SAM35	P14693	329 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	RNR3	P21672	869 aa	Known RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	RNA14	P25298	677 aa	Known RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	DSS4	P32601	143 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	PDR3	P33200	976 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	PTC1	P35182	281 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	ARA1	P38115	344 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	DUG2	P38149	878 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms