RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	FRE8	Q12209	686 aa		2.87	□□□□□ -1.95
APA1	YCL050C	YOL085C	Q99345	113 aa		2.87	□□□□□ -1.95
APA1	YCL050C	AUS1	Q08409	1394 aa		2.87	□□□□□ -1.95
APA1	YCL050C	MAS1	P10507	462 aa		2.86	□□□□□ -1.95
APA1	YCL050C	BGL2	P15703	313 aa	Known RBP	2.86	□□□□□ -1.95
APA1	YCL050C	UBA1	P22515	1024 aa	Known RBP	2.86	□□□□□ -1.95
APA1	YCL050C	URA10	P30402	227 aa		2.86	□□□□□ -1.95
APA1	YCL050C	GGC1	P38988	300 aa		2.86	□□□□□ -1.95
APA1	YCL050C	YNR068C	P53754	272 aa		2.86	□□□□□ -1.95
APA1	YCL050C	API2	Q04413	109 aa		2.86	□□□□□ -1.95
APA1	YCL050C	YMR310C	Q04867	317 aa	Predicted RBP	2.86	□□□□□ -1.95
APA1	YCL050C	YOL029C	Q08187	201 aa		2.86	□□□□□ -1.95
APA1	YCL050C	MMT2	Q08970	484 aa		2.86	□□□□□ -1.95
APA1	YCL050C	YAL067W-A	Q8TGK6	75 aa		2.86	□□□□□ -1.95
APA1	YCL050C	FAR1	P21268	830 aa		2.85	□□□□□ -1.95
APA1	YCL050C	YKL071W	P36086	256 aa		2.85	□□□□□ -1.95
APA1	YCL050C	DAD2	P36162	133 aa		2.85	□□□□□ -1.95
APA1	YCL050C	EFM3	P47163	339 aa		2.85	□□□□□ -1.95
APA1	YCL050C	SED5	Q01590	340 aa		2.85	□□□□□ -1.95
APA1	YCL050C	YPR195C	Q06594	109 aa		2.85	□□□□□ -1.95
APA1	YCL050C	APC5	Q08683	685 aa		2.85	□□□□□ -1.95
APA1	YCL050C	SLM3	Q12093	417 aa		2.85	□□□□□ -1.95
APA1	YCL050C	FLO11	P08640	1367 aa		2.85	□□□□□ -1.95
APA1	YCL050C	RPS16A	P0CX51	143 aa	Known RBP	2.84	□□□□□ -1.95
APA1	YCL050C	RPS16B	P0CX52	143 aa	Known RBP	2.84	□□□□□ -1.95
APA1	YCL050C	THR4	P16120	514 aa	Known RBP	2.84	□□□□□ -1.95
APA1	YCL050C	ARF2	P19146	181 aa	Known RBP	2.84	□□□□□ -1.95
APA1	YCL050C	CKI1	P20485	582 aa		2.84	□□□□□ -1.95
APA1	YCL050C	GRR1	P24814	1151 aa		2.84	□□□□□ -1.95
APA1	YCL050C	HMX1	P32339	317 aa		2.84	□□□□□ -1.95
APA1	YCL050C	PCH2	P38126	564 aa		2.84	□□□□□ -1.95
APA1	YCL050C	ATG7	P38862	630 aa		2.84	□□□□□ -1.95
APA1	YCL050C	HST4	P53688	370 aa		2.84	□□□□□ -1.95
APA1	YCL050C	SUR7	P54003	302 aa		2.84	□□□□□ -1.95
APA1	YCL050C	FRE6	Q12473	712 aa		2.84	□□□□□ -1.95
APA1	YCL050C	BI3	Q9ZZW7	517 aa		2.84	□□□□□ -1.95
APA1	YCL050C	FUS3	P16892	353 aa	Known RBP	2.83	□□□□□ -1.96
APA1	YCL050C	DAP2	P18962	818 aa		2.83	□□□□□ -1.96
APA1	YCL050C	RAD23	P32628	398 aa	Known RBP	2.83	□□□□□ -1.96
APA1	YCL050C	PTK1	P36002	662 aa	Predicted RBP	2.83	□□□□□ -1.96
APA1	YCL050C	DBP7	P36120	742 aa	Known RBP	2.83	□□□□□ -1.96
APA1	YCL050C	RCK2	P38623	610 aa		2.83	□□□□□ -1.96
APA1	YCL050C	NRM1	P53718	249 aa		2.83	□□□□□ -1.96
APA1	YCL050C	RCF1	Q03713	159 aa		2.83	□□□□□ -1.96
APA1	YCL050C	ALE1	Q08548	619 aa		2.83	□□□□□ -1.96
APA1	YCL050C	AIM45	Q12480	344 aa	Known RBP	2.83	□□□□□ -1.96
APA1	YCL050C	SKS1	Q12505	502 aa		2.83	□□□□□ -1.96
APA1	YCL050C	CKA2	P19454	339 aa		2.82	□□□□□ -1.96
APA1	YCL050C	PHO84	P25297	587 aa	Known RBP	2.82	□□□□□ -1.96
APA1	YCL050C	PRY2	P36110	329 aa		2.82	□□□□□ -1.96
APA1	YCL050C	TRR2	P38816	342 aa		2.82	□□□□□ -1.96
APA1	YCL050C	HIT1	P46973	164 aa		2.82	□□□□□ -1.96
APA1	YCL050C	RPA34	P47006	233 aa	Predicted RBP	2.82	□□□□□ -1.96
APA1	YCL050C	UTP6	Q02354	440 aa	Known RBP	2.82	□□□□□ -1.96
APA1	YCL050C	NAT4	Q04751	285 aa		2.82	□□□□□ -1.96
APA1	YCL050C	RFM1	Q12192	310 aa		2.82	□□□□□ -1.96
APA1	YCL050C	YOR012W	Q12351	137 aa		2.82	□□□□□ -1.96
APA1	YCL050C	RDS1	P25611	832 aa		2.81	□□□□□ -1.96
APA1	YCL050C	MKK1	P32490	508 aa		2.81	□□□□□ -1.96
APA1	YCL050C	SKG6	P32900	734 aa	Predicted RBP	2.81	□□□□□ -1.96
APA1	YCL050C	MRPS5	P33759	307 aa		2.81	□□□□□ -1.96
APA1	YCL050C	IST2	P38250	946 aa		2.81	□□□□□ -1.96
APA1	YCL050C	EFM1	P38732	585 aa		2.81	□□□□□ -1.96
APA1	YCL050C	UFE1	P41834	346 aa		2.81	□□□□□ -1.96
APA1	YCL050C	YHC3	P47040	408 aa		2.81	□□□□□ -1.96
APA1	YCL050C	RRB1	Q04225	511 aa	Known RBP	2.81	□□□□□ -1.96
APA1	YCL050C	CSM3	Q04659	317 aa		2.81	□□□□□ -1.96
APA1	YCL050C	MXR2	P25566	168 aa		2.8	□□□□□ -1.96
APA1	YCL050C	AST1	P35183	429 aa		2.8	□□□□□ -1.96
APA1	YCL050C	YFR018C	P43599	363 aa		2.8	□□□□□ -1.96
APA1	YCL050C	LSG1	P53145	640 aa	Known RBP	2.8	□□□□□ -1.96
APA1	YCL050C	INP2	Q03824	705 aa		2.8	□□□□□ -1.96
APA1	YCL050C	UTP15	Q04305	513 aa	Known RBP	2.8	□□□□□ -1.96
APA1	YCL050C	ARR1	Q06596	294 aa		2.8	□□□□□ -1.96
APA1	YCL050C	SFG1	Q12507	346 aa		2.8	□□□□□ -1.96
APA1	YCL050C	HSP82	P02829	709 aa	Known RBP	2.79	□□□□□ -1.96
APA1	YCL050C	CYM1	P32898	989 aa		2.79	□□□□□ -1.96
APA1	YCL050C	TIP20	P33891	701 aa		2.79	□□□□□ -1.96
APA1	YCL050C	FRM2	P37261	193 aa		2.79	□□□□□ -1.96
APA1	YCL050C	ADH5	P38113	351 aa	Known RBP	2.79	□□□□□ -1.96
APA1	YCL050C	TAE1	P38340	232 aa		2.79	□□□□□ -1.96
APA1	YCL050C	SCS7	Q03529	384 aa		2.79	□□□□□ -1.96
APA1	YCL050C	IME2	P32581	645 aa		2.78	□□□□□ -1.96
APA1	YCL050C	NBL1	Q3E7Y6	73 aa		2.78	□□□□□ -1.96
APA1	YCL050C	VPS63	O13549	108 aa		2.77	□□□□□ -1.97
APA1	YCL050C	STE3	P06783	470 aa		2.77	□□□□□ -1.97
APA1	YCL050C	YLL053C	P0CD98	152 aa		2.77	□□□□□ -1.97
APA1	YCL050C	UTR1	P21373	530 aa		2.77	□□□□□ -1.97
APA1	YCL050C	IML3	P38265	245 aa		2.77	□□□□□ -1.97
APA1	YCL050C	BDH1	P39714	382 aa		2.77	□□□□□ -1.97
APA1	YCL050C	YIL059C	P40520	121 aa		2.77	□□□□□ -1.97
APA1	YCL050C	CPR7	P47103	393 aa		2.77	□□□□□ -1.97
APA1	YCL050C	ZRG17	P53735	605 aa		2.77	□□□□□ -1.97
APA1	YCL050C	YNL143C	P53908	130 aa		2.77	□□□□□ -1.97
APA1	YCL050C	AQR1	P53943	586 aa		2.77	□□□□□ -1.97
APA1	YCL050C	APC4	Q04601	652 aa		2.77	□□□□□ -1.97
APA1	YCL050C	RPN8	Q08723	338 aa	Known RBP	2.77	□□□□□ -1.97
APA1	YCL050C	TAF10	Q12030	206 aa		2.77	□□□□□ -1.97
APA1	YCL050C	YDL211C	Q12121	372 aa		2.77	□□□□□ -1.97
APA1	YCL050C	HXT2	P23585	541 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms