RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 IKQ13123 557 aaPredicted RBP15.04■□□□□ -0
PHGDH-233ENST00000642021 DRAP1Q14919 205 aaPredicted RBP15.04■□□□□ -0
PHGDH-233ENST00000642021 PWP2Q15269 919 aaKnown RBP15.04■□□□□ -0
PHGDH-233ENST00000642021 VPS36Q86VN1 386 aa15.04■□□□□ -0
PHGDH-233ENST00000642021 KIAA0825Q8IV33 1275 aa15.04■□□□□ -0
PHGDH-233ENST00000642021 FAM186BQ8IYM0 893 aa15.04■□□□□ -0
PHGDH-233ENST00000642021 MYCT1Q8N699 235 aa15.04■□□□□ -0
PHGDH-233ENST00000642021 LMBR1Q8WVP7 490 aa15.04■□□□□ -0
PHGDH-233ENST00000642021 TRIM51Q9BSJ1 452 aa15.04■□□□□ -0
PHGDH-233ENST00000642021 GREB1LQ9C091 1923 aaPredicted RBP15.04■□□□□ -0
PHGDH-233ENST00000642021 GTPBP10A4D1E9 387 aaKnown RBP15.03■□□□□ -0
PHGDH-233ENST00000642021 SLITRK3O94933 977 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 FAM107AO95990 144 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 FERP16591 822 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 SOX5P35711 763 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 TMC3Q7Z5M5 1100 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 ARHGEF26Q96DR7 871 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 FIZ1Q96SL8 496 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 POLR3CQ9BUI4 534 aaPredicted RBP15.03■□□□□ -0
PHGDH-233ENST00000642021 OLFML3Q9NRN5 406 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 USP21Q9UK80 565 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 DNAJC12Q9UKB3 198 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 DDX3YO15523 660 aaKnown RBP15.03■□□□□ -0
PHGDH-233ENST00000642021 CHMP2AO43633 222 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 TRIM49P0CI25 452 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 TRIM49CP0CI26 452 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 PPATQ06203 517 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 DHX9Q08211 1270 aaKnown RBP15.03■□□□□ -0
PHGDH-233ENST00000642021 C1orf186Q6ZWK4 172 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 TPH2Q8IWU9 490 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 SEC14L1Q92503 715 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 SYT11Q9BT88 431 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 PAGR1Q9BTK6 254 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 AMFRQ9UKV5 643 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 INTUQ9ULD6 942 aa15.03■□□□□ -0
PHGDH-233ENST00000642021 NOVA2Q9UNW9 492 aaKnown RBP15.03■□□□□ -0
PHGDH-233ENST00000642021 IGLV3-22A0A075B6J6 115 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 UBAP1LF5GYI3 381 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 ANXA13P27216 316 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 PSMC2P35998 433 aaKnown RBP15.02■□□□□ -0
PHGDH-233ENST00000642021 FMO5P49326 533 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 NPEPPSP55786 919 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 IFT88Q13099 833 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 DYDC2Q96IM9 177 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 WDR18Q9BV38 432 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 STK33Q9BYT3 514 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 SLITRK6Q9H5Y7 841 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 DBNDD1Q9H9R9 158 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 ERVK-5Q9HDB9 667 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 BCS1LQ9Y276 419 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 LTBP1Q14766 1721 aa15.02■□□□□ -0
PHGDH-233ENST00000642021 KIAA0754O94854 1291 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 ZNF76P36508 570 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 GTF2A1P52655 376 aaPredicted RBP15.02□□□□□ -0.01
PHGDH-233ENST00000642021 ZNF211Q13398 564 aaPredicted RBP15.02□□□□□ -0.01
PHGDH-233ENST00000642021 PRPF4BQ13523 1007 aaKnown RBP15.02□□□□□ -0.01
PHGDH-233ENST00000642021 QPCTQ16769 361 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 SYDE2Q5VT97 1194 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 CHADLQ6NUI6 762 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 OTOP1Q7RTM1 612 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 SYCE1Q8N0S2 351 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 SPICE1Q8N0Z3 855 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 ATP8B4Q8TF62 1192 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 PI4KBQ9UBF8 816 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 LY75O60449 1722 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 LRRN2O75325 713 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 FAM13AO94988 1023 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 FOSP01100 380 aaPredicted RBP15.02□□□□□ -0.01
PHGDH-233ENST00000642021 PLS1Q14651 629 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 AADACL2Q6P093 401 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 TATDN1Q6P1N9 297 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 C6orf89Q6UWU4 347 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 SUGP1Q8IWZ8 645 aaKnown RBP15.02□□□□□ -0.01
PHGDH-233ENST00000642021 CCDC26Q8TAB7 109 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 CYFIP2Q96F07 1278 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 THAP2Q9H0W7 228 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 WRAP73Q9P2S5 460 aaPredicted RBP15.02□□□□□ -0.01
PHGDH-233ENST00000642021 COG5Q9UP83 839 aa15.02□□□□□ -0.01
PHGDH-233ENST00000642021 A0A1W2PRG0 241 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 CYP2J2P51589 502 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 RRP1BQ14684 758 aaKnown RBP15.01□□□□□ -0.01
PHGDH-233ENST00000642021 RNF187Q5TA31 235 aaPredicted RBP15.01□□□□□ -0.01
PHGDH-233ENST00000642021 PRPF38AQ8NAV1 312 aaKnown RBP15.01□□□□□ -0.01
PHGDH-233ENST00000642021 RDH13Q8NBN7 331 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 GLG1Q92896 1179 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 ZDHHC15Q96MV8 337 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 ATXN2Q99700 1313 aaKnown RBP15.01□□□□□ -0.01
PHGDH-233ENST00000642021 FSBPO95073 299 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 MAGOHP61326 146 aaKnown RBP15.01□□□□□ -0.01
PHGDH-233ENST00000642021 UBXN2AP68543 259 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 ARHGAP44Q17R89 818 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 ODF2Q5BJF6 829 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 ZNF720Q7Z2F6 126 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 ARFGAP2Q8N6H7 521 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 RFFLQ8WZ73 363 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 ALG3Q92685 438 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 MAGOHBQ96A72 148 aaKnown RBP15.01□□□□□ -0.01
PHGDH-233ENST00000642021 ATP8A1Q9Y2Q0 1164 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 SMCHD1A6NHR9 2005 aa15.01□□□□□ -0.01
PHGDH-233ENST00000642021 GMNCA6NCL1 334 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms