RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 HNRNPCL4P0DMR1 293 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 EPB41P11171 864 aaKnown RBP5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 NOS3P29474 1203 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 RANBP1P43487 201 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 ATP5OP48047 213 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 SULT1E1P49888 294 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 PMS1P54277 932 aaKnown RBP5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 SLC12A2P55011 1212 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 TUBA4AP68366 448 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 PIP4K2BP78356 416 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 MPP1Q00013 466 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 STK11Q15831 433 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 CCDC38Q502W7 563 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 INTS6LQ5JSJ4 861 aaKnown RBP5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 ITPRIPL1Q6GPH6 555 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 KLC3Q6P597 504 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 IGF2-ASQ6U949 168 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 LDHAL6AQ6ZMR3 332 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 ANKS3Q6ZW76 656 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 TAOK1Q7L7X3 1001 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 ARHGAP22Q7Z5H3 698 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 PRAG1Q86YV5 1406 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 COLGALT2Q8IYK4 626 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 LRRC47Q8N1G4 583 aaKnown RBP5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 ZNF619Q8N2I2 560 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 TMCO5AQ8N6Q1 288 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 SCG3Q8WXD2 468 aaKnown RBP5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 SHC3Q92529 594 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 HDAC2Q92769 488 aaKnown RBP5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 ATP6V0A1Q93050 837 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 PPP2R3CQ969Q6 453 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 SAAL1Q96ER3 474 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 RMDN3Q96TC7 470 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 GAL3ST1Q99999 423 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 FSD1Q9BTV5 496 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 CARD11Q9BXL7 1154 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 TRIM4Q9C037 500 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 GBP3Q9H0R5 595 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 TTC12Q9H892 705 aaPredicted RBP5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 USP40Q9NVE5 1235 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 PAIP2BQ9ULR5 123 aaKnown RBP5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 KCNH4Q9UQ05 1017 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 RNF114Q9Y508 228 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 SLC4A7Q9Y6M7 1214 aa5.69□□□□□ -1.5
SAMMSON-213ENST00000641336 KIF1BO60333 1816 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 MADDQ8WXG6 1647 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 WDR7Q9Y4E6 1490 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 TRAPPC8Q9Y2L5 1435 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 ABHD14A-ACY1A0A1B0GW23 586 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 CCDC85CA6NKD9 419 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L15C9J2P7 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L10C9JJH3 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L13C9JLJ4 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L12C9JPN9 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L11C9JVI0 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L21D6R901 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L18D6R9N7 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L22D6RA61 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L17D6RBQ6 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L19D6RCP7 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L20D6RJB6 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 F5H423 210 aaPredicted RBP5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 BIN1O00499 593 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 C2CD2LO14523 706 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 EXTL3O43909 919 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 RANBP6O60518 1105 aaKnown RBP5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 DGKIO75912 1065 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 NPPAP01160 153 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 CD4P01730 458 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 PGRP06401 933 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L8P0C7I0 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 CKBP12277 381 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 ARF4P18085 180 aaPredicted RBP5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 ADD1P35611 737 aaKnown RBP5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 SOX6P35712 828 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 SLC16A2P36021 539 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 HAAOP46952 286 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 KCNJ6P48051 423 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 MRPL12P52815 198 aaKnown RBP5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 MRPS15P82914 257 aaKnown RBP5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 NFKB2Q00653 900 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 CAP1Q01518 475 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 MLLT1Q03111 559 aaPredicted RBP5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 GBE1Q04446 702 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 APOBRQ0VD83 1088 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 USP17L24Q0WX57 530 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 RAB33AQ14088 237 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 ZNF792Q3KQV3 632 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 ARHGAP29Q52LW3 1261 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 KRTCAP3Q53RY4 240 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 ZBTB41Q5SVQ8 909 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 AADACL4Q5VUY2 407 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 LIN54Q6MZP7 749 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 NEK5Q6P3R8 708 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 NLRP9Q7RTR0 991 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 BNIPLQ7Z465 357 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 VSIG1Q86XK7 387 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 C10orf67Q8IYJ2 551 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 NRSN1Q8IZ57 195 aa5.68□□□□□ -1.5
SAMMSON-213ENST00000641336 SPATA5Q8NB90 893 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms