RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 MTG1Q9BT17 334 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-210ENST00000641115 SMTNL1A8MU46 457 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 SOX10P56693 466 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 MYL5Q02045 173 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 LRRC41Q15345 812 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 GRIK4Q16099 956 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 CTU1Q7Z7A3 348 aaKnown RBP21.9■■□□□ 1.1
PHGDH-210ENST00000641115 RNF180Q86T96 592 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 PCSK9Q8NBP7 692 aaKnown RBP21.9■■□□□ 1.1
PHGDH-210ENST00000641115 SLC17A8Q8NDX2 589 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 NELFBQ8WX92 580 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 TMEM143Q96AN5 459 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 IFT74Q96LB3 600 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 FGFBP2Q9BYJ0 223 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 GRPEL1Q9HAV7 217 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 RWDD2AQ9UIY3 292 aa21.9■■□□□ 1.1
PHGDH-210ENST00000641115 RRN3P2A6NIE6 340 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 K7ENM7 598 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 HAS3O00219 553 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 IKBKBO14920 756 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 MAGEB2O15479 319 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 C22orf31O95567 290 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 HSPA1AP0DMV8 641 aaKnown RBP21.89■■□□□ 1.09
PHGDH-210ENST00000641115 HSPA1BP0DMV9 641 aaKnown RBP21.89■■□□□ 1.09
PHGDH-210ENST00000641115 MAPTP10636 758 aaKnown RBP21.89■■□□□ 1.09
PHGDH-210ENST00000641115 CTCFP49711 727 aaPredicted RBP21.89■■□□□ 1.09
PHGDH-210ENST00000641115 SMTNP53814 917 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 PEX3P56589 373 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 DHX40Q8IX18 779 aaKnown RBP21.89■■□□□ 1.09
PHGDH-210ENST00000641115 GLIS3Q8NEA6 775 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 KLHDC9Q8NEP7 349 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.89■■□□□ 1.095e-8■■□□□ 14.4
PHGDH-210ENST00000641115 SUGCTQ9HAC7 445 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 KCNG1Q9UIX4 513 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 NRCAMQ92823 1304 aa21.89■■□□□ 1.09
PHGDH-210ENST00000641115 IGKV6-21A0A0C4DH24 114 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 BICDL2A1A5D9 508 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 SMIM10L2AP0DMW4 78 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 SMIM10L2BP0DMW5 78 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 MYBP10242 640 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 NMT1P30419 496 aaKnown RBP21.88■■□□□ 1.09
PHGDH-210ENST00000641115 DNM2P50570 870 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 CASP5P51878 434 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 TPM4P67936 248 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 ALCAMQ13740 583 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 PPP2R5AQ15172 486 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 IER5Q5VY09 327 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 ENOX1Q8TC92 643 aaKnown RBP21.88■■□□□ 1.09
PHGDH-210ENST00000641115 FIZ1Q96SL8 496 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 SCN10AQ9Y5Y9 1956 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 CCDC169A6NNP5 214 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 EIF3DO15371 548 aaKnown RBP eCLIP21.88■■□□□ 1.09
PHGDH-210ENST00000641115 ASGR1P07306 291 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 KLRC1P26715 233 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 ARL2P36404 184 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 MRE11P49959 708 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 LBX1P52954 281 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 STX17P56962 302 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 EFCAB12Q6NXP0 572 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 CXCL17Q6UXB2 119 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 EPM2AIP1Q7L775 607 aaPredicted RBP21.88■■□□□ 1.09
PHGDH-210ENST00000641115 ZNF720Q7Z2F6 126 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 METTL13Q8N6R0 699 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 SCFD1Q8WVM8 642 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 PSPC1Q8WXF1 523 aaKnown RBP21.88■■□□□ 1.09
PHGDH-210ENST00000641115 EVPLQ92817 2033 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 P2RX5Q93086 422 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 PCDHB13Q9Y5F0 798 aa21.88■■□□□ 1.09
PHGDH-210ENST00000641115 UBE4BO95155 1302 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 CCNE1P24864 410 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 NPTX2P47972 431 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 NCKAP1LP55160 1127 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 KCNA10Q16322 511 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 LHX8Q68G74 356 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 MTHFD1LQ6UB35 978 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 LRRC71Q8N4P6 559 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 C7orf31Q8N865 590 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 LMBR1Q8WVP7 490 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 SPIRE2Q8WWL2 714 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 BSNDQ8WZ55 320 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 KMT5AQ9NQR1 393 aa21.87■■□□□ 1.09
PHGDH-210ENST00000641115 HTTP42858 3142 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 H0YCG3 227 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 TMOD1P28289 359 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 MXD4Q14582 209 aaPredicted RBP21.86■■□□□ 1.09
PHGDH-210ENST00000641115 TPD52L1Q16890 204 aaPredicted RBP21.86■■□□□ 1.09
PHGDH-210ENST00000641115 BMT2Q1RMZ1 405 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 UVSSAQ2YD98 709 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 NELFCDQ8IXH7 590 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 UNC93B1Q9H1C4 597 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 ST6GALNAC4Q9H4F1 302 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 SETD4Q9NVD3 440 aa21.86■■□□□ 1.09
PHGDH-210ENST00000641115 SLC16A4O15374 487 aa21.85■■□□□ 1.09
PHGDH-210ENST00000641115 PRPF6O94906 941 aaKnown RBP21.85■■□□□ 1.09
PHGDH-210ENST00000641115 ABCD1P33897 745 aa21.85■■□□□ 1.09
PHGDH-210ENST00000641115 NAMPTP43490 491 aa21.85■■□□□ 1.09
PHGDH-210ENST00000641115 SPATA1Q5VX52 437 aa21.85■■□□□ 1.09
PHGDH-210ENST00000641115 CCSAPQ6IQ19 270 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-210ENST00000641115 FBXO46Q6PJ61 603 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-210ENST00000641115 HAUS6Q7Z4H7 955 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms