RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 FOSBP53539 338 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 MGAT3Q09327 533 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 LRCH2Q5VUJ6 765 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 RSPH3Q86UC2 560 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 DIS3L2Q8IYB7 885 aaKnown RBP20.5■□□□□ 0.87
VPS72-207ENST00000640458 CMTR2Q8IYT2 770 aaKnown RBP20.5■□□□□ 0.87
VPS72-207ENST00000640458 ETNPPLQ8TBG4 499 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 MICAL1Q8TDZ2 1067 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 TEKT3Q9BXF9 490 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 TLE6Q9H808 572 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 TRPC6Q9Y210 931 aa20.5■□□□□ 0.87
VPS72-207ENST00000640458 MAFBQ9Y5Q3 323 aaPredicted RBP20.5■□□□□ 0.87
VPS72-207ENST00000640458 KAT6AQ92794 2004 aa20.49■□□□□ 0.87
VPS72-207ENST00000640458 WDR64B1ANS9 1081 aa20.49■□□□□ 0.87
VPS72-207ENST00000640458 MCM2P49736 904 aa20.49■□□□□ 0.87
VPS72-207ENST00000640458 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
VPS72-207ENST00000640458 FBXO47Q5MNV8 452 aa20.49■□□□□ 0.87
VPS72-207ENST00000640458 MARCH8Q5T0T0 291 aa20.49■□□□□ 0.87
VPS72-207ENST00000640458 TAF2Q6P1X5 1199 aa20.49■□□□□ 0.87
VPS72-207ENST00000640458 PDXDC2PQ6P474 469 aa20.49■□□□□ 0.87
VPS72-207ENST00000640458 C8orf76Q96K31 380 aa20.49■□□□□ 0.87
VPS72-207ENST00000640458 RIF1Q5UIP0 2472 aaKnown RBP20.49■□□□□ 0.87
VPS72-207ENST00000640458 FAM205CA6NFA0 338 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 PER2O15055 1255 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 SLC37A4O43826 429 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 HBP1O60381 514 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 CD2BP2O95400 341 aaKnown RBP20.48■□□□□ 0.87
VPS72-207ENST00000640458 PDGFBP01127 241 aaPredicted RBP20.48■□□□□ 0.87
VPS72-207ENST00000640458 ATP4AP20648 1035 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 SFNP31947 248 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 PTPN21Q16825 1174 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 B3GNT9Q6UX72 402 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 TSHZ1Q6ZSZ6 1077 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 ASCL5Q7RTU5 278 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 ZBTB33Q86T24 672 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 FAM184AQ8NB25 1140 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 ATP8B4Q8TF62 1192 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 DNAJB3Q8WWF6 145 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 LINC01599Q8WXQ3 324 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 GJA10Q969M2 543 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 TMX3Q96JJ7 454 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 UNC45AQ9H3U1 944 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 DISC1Q9NRI5 854 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 TUBE1Q9UJT0 475 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 SAMM50Q9Y512 469 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 CDY2AQ9Y6F7 541 aa20.48■□□□□ 0.87
VPS72-207ENST00000640458 CCNT1O60563 726 aaKnown RBP20.47■□□□□ 0.87
VPS72-207ENST00000640458 ATF7P17544 494 aaPredicted RBP20.47■□□□□ 0.87
VPS72-207ENST00000640458 CD52P31358 61 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 JAK3P52333 1124 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 IGBP1P78318 339 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 GUCY1B3Q02153 619 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 SAFBQ15424 915 aaKnown RBP eCLIP20.47■□□□□ 0.87
VPS72-207ENST00000640458 RTN4RL1Q86UN2 441 aaPredicted RBP20.47■□□□□ 0.87
VPS72-207ENST00000640458 NPAS4Q8IUM7 802 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 FBXO18Q8NFZ0 1043 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 RDM1Q8NG50 284 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 FAM20AQ96MK3 541 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 AGO3Q9H9G7 860 aaKnown RBP20.47■□□□□ 0.87
VPS72-207ENST00000640458 KCNMB3Q9NPA1 279 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 GABBR1Q9UBS5 961 aa20.47■□□□□ 0.87
VPS72-207ENST00000640458 TBX3O15119 743 aa20.46■□□□□ 0.87
VPS72-207ENST00000640458 IBSPP21815 317 aaPredicted RBP20.46■□□□□ 0.87
VPS72-207ENST00000640458 SUSD6Q92537 303 aa20.46■□□□□ 0.87
VPS72-207ENST00000640458 KIAA1671Q9BY89 1806 aa20.46■□□□□ 0.87
VPS72-207ENST00000640458 PLXNA3P51805 1871 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 PROB1E7EW31 1015 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 GALR2O43603 387 aaPredicted RBP20.45■□□□□ 0.86
VPS72-207ENST00000640458 CHMP2AO43633 222 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 RPLP2P05387 115 aaKnown RBP20.45■□□□□ 0.86
VPS72-207ENST00000640458 STAG3L1P0CL83 205 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 SP100P23497 879 aaPredicted RBP20.45■□□□□ 0.86
VPS72-207ENST00000640458 GATMP50440 423 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 ZNF484Q5JVG2 852 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 MIER3Q7Z3K6 550 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 VN1R2Q8NFZ6 395 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 BBXQ8WY36 941 aaPredicted RBP20.45■□□□□ 0.86
VPS72-207ENST00000640458 RIPOR3Q96MK2 946 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 PCDHA2Q9Y5H9 948 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 FAM186AA6NE01 2351 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 IGSF9BQ9UPX0 1349 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 COL1A2P08123 1366 aa20.45■□□□□ 0.86
VPS72-207ENST00000640458 NUBP1P53384 320 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 MRPS6P82932 125 aaKnown RBP20.44■□□□□ 0.86
VPS72-207ENST00000640458 SPOUT1Q5T280 376 aaKnown RBP20.44■□□□□ 0.86
VPS72-207ENST00000640458 MTHFD1LQ6UB35 978 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 CKAP2LQ8IYA6 745 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 CRIPAKQ8N1N5 446 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 TRAPPC12Q8WVT3 735 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 HAS1Q92839 578 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 ZBTB10Q96DT7 871 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 FAM167AQ96KS9 214 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 FAM49AQ9H0Q0 323 aaPredicted RBP20.44■□□□□ 0.86
VPS72-207ENST00000640458 FOXP1Q9H334 677 aaPredicted RBP20.44■□□□□ 0.86
VPS72-207ENST00000640458 LRFN2Q9ULH4 789 aa20.44■□□□□ 0.86
VPS72-207ENST00000640458 SMIM35A0A1B0GVV1 85 aa20.43■□□□□ 0.86
VPS72-207ENST00000640458 PRR23AA6NEV1 266 aa20.43■□□□□ 0.86
VPS72-207ENST00000640458 PPP2R5CQ13362 524 aa20.43■□□□□ 0.86
VPS72-207ENST00000640458 POTEDQ86YR6 584 aa20.43■□□□□ 0.86
VPS72-207ENST00000640458 APOL5Q9BWW9 433 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms